RNA–Protein interactions for RNA: ENST00000563127.1

KATNB1-204, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-204ENST00000563127 PPP1R15AO75807 674 aaPredicted RBP28.94■■■□□ 2.22
KATNB1-204ENST00000563127 FOXD1Q16676 465 aa28.94■■■□□ 2.22
KATNB1-204ENST00000563127 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
KATNB1-204ENST00000563127 NUTM2DQ5VT03 806 aaPredicted RBP28.93■■■□□ 2.22
KATNB1-204ENST00000563127 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.93■■■□□ 2.22
KATNB1-204ENST00000563127 SLC26A8Q96RN1 970 aa28.93■■■□□ 2.22
KATNB1-204ENST00000563127 RAB3GAP2Q9H2M9 1393 aa28.9■■■□□ 2.22
KATNB1-204ENST00000563127 IQSEC2Q5JU85 1478 aa28.9■■■□□ 2.22
KATNB1-204ENST00000563127 TRPM2O94759 1503 aa28.89■■■□□ 2.22
KATNB1-204ENST00000563127 ZNF326Q5BKZ1 582 aaKnown RBP28.89■■■□□ 2.22
KATNB1-204ENST00000563127 CPS1P31327 1500 aa28.89■■■□□ 2.21
KATNB1-204ENST00000563127 CLTCL1P53675 1640 aa28.88■■■□□ 2.21
KATNB1-204ENST00000563127 STRCP1A6NGW2 1772 aa28.86■■■□□ 2.21
KATNB1-204ENST00000563127 PLEKHG1Q9ULL1 1385 aa28.86■■■□□ 2.21
KATNB1-204ENST00000563127 KIF1BO60333 1816 aa28.84■■■□□ 2.21
KATNB1-204ENST00000563127 UBAP1LF5GYI3 381 aa28.81■■■□□ 2.2
KATNB1-204ENST00000563127 KCNA6P17658 529 aa28.8■■■□□ 2.2
KATNB1-204ENST00000563127 TBX22Q9Y458 520 aa28.79■■■□□ 2.2
KATNB1-204ENST00000563127 HRCP23327 699 aa28.78■■■□□ 2.2
KATNB1-204ENST00000563127 LRRC7Q96NW7 1537 aa28.76■■■□□ 2.19
KATNB1-204ENST00000563127 CCDC144AA2RUR9 1427 aa28.73■■■□□ 2.19
KATNB1-204ENST00000563127 ADAMTS13Q76LX8 1427 aa28.72■■■□□ 2.19
KATNB1-204ENST00000563127 PROSER2Q86WR7 435 aaPredicted RBP28.72■■■□□ 2.19
KATNB1-204ENST00000563127 TOM1O60784 492 aa28.71■■■□□ 2.19
KATNB1-204ENST00000563127 RPGRIP1LQ68CZ1 1315 aa28.69■■■□□ 2.18
KATNB1-204ENST00000563127 NEXMIFQ5QGS0 1516 aa28.69■■■□□ 2.18
KATNB1-204ENST00000563127 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
KATNB1-204ENST00000563127 VGFO15240 615 aaPredicted RBP28.68■■■□□ 2.18
KATNB1-204ENST00000563127 RGL3Q3MIN7 710 aa28.68■■■□□ 2.18
KATNB1-204ENST00000563127 RBM33Q96EV2 1170 aaKnown RBP28.66■■■□□ 2.18
KATNB1-204ENST00000563127 TMEM94Q12767 1356 aa28.64■■■□□ 2.18
KATNB1-204ENST00000563127 DIP2AQ14689 1571 aa28.64■■■□□ 2.18
KATNB1-204ENST00000563127 PIP4K2BP78356 416 aa28.64■■■□□ 2.18
KATNB1-204ENST00000563127 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.17
KATNB1-204ENST00000563127 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
KATNB1-204ENST00000563127 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
KATNB1-204ENST00000563127 NWD1Q149M9 1564 aa28.62■■■□□ 2.17
KATNB1-204ENST00000563127 SETBP1Q9Y6X0 1596 aa28.61■■■□□ 2.17
KATNB1-204ENST00000563127 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
KATNB1-204ENST00000563127 SPATA31E1Q6ZUB1 1445 aa28.6■■■□□ 2.17
KATNB1-204ENST00000563127 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
KATNB1-204ENST00000563127 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
KATNB1-204ENST00000563127 PPLO60437 1756 aa28.58■■■□□ 2.17
KATNB1-204ENST00000563127 ANKRD30BQ9BXX2 1392 aa28.57■■■□□ 2.16
KATNB1-204ENST00000563127 METP08581 1390 aa28.56■■■□□ 2.16
KATNB1-204ENST00000563127 PTPRUQ92729 1446 aa28.56■■■□□ 2.16
KATNB1-204ENST00000563127 ALKQ9UM73 1620 aa28.54■■■□□ 2.16
KATNB1-204ENST00000563127 ADGRF5Q8IZF2 1346 aa28.53■■■□□ 2.16
KATNB1-204ENST00000563127 C14orf37Q86TY3 774 aa28.5■■■□□ 2.15
KATNB1-204ENST00000563127 MSH6P52701 1360 aa28.48■■■□□ 2.15
KATNB1-204ENST00000563127 TRIM26Q12899 539 aaPredicted RBP28.46■■■□□ 2.15
KATNB1-204ENST00000563127 IFT172Q9UG01 1749 aa28.46■■■□□ 2.15
KATNB1-204ENST00000563127 NCOA3Q9Y6Q9 1424 aa28.45■■■□□ 2.15
KATNB1-204ENST00000563127 HSPA1LP34931 641 aa28.45■■■□□ 2.14
KATNB1-204ENST00000563127 XRN1Q8IZH2 1706 aaKnown RBP28.43■■■□□ 2.14
KATNB1-204ENST00000563127 C19orf44Q9H6X5 657 aa28.43■■■□□ 2.14
KATNB1-204ENST00000563127 SETD1AO15047 1707 aaKnown RBP28.42■■■□□ 2.14
KATNB1-204ENST00000563127 SLAIN2Q9P270 581 aa28.4■■■□□ 2.14
KATNB1-204ENST00000563127 ATF3P18847 181 aa28.37■■■□□ 2.13
KATNB1-204ENST00000563127 KDM2AQ9Y2K7 1162 aa28.37■■■□□ 2.13
KATNB1-204ENST00000563127 DCAF11Q8TEB1 546 aa28.36■■■□□ 2.13
KATNB1-204ENST00000563127 PIK3C2GO75747 1445 aa28.35■■■□□ 2.13
KATNB1-204ENST00000563127 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
KATNB1-204ENST00000563127 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
KATNB1-204ENST00000563127 TMEM132EQ6IEE7 984 aa28.35■■■□□ 2.13
KATNB1-204ENST00000563127 CADPS2Q86UW7 1296 aa28.35■■■□□ 2.13
KATNB1-204ENST00000563127 C14orf93Q9H972 538 aaKnown RBP28.34■■■□□ 2.13
KATNB1-204ENST00000563127 STK26Q9P289 416 aa28.34■■■□□ 2.13
KATNB1-204ENST00000563127 CFAP70Q5T0N1 1121 aa28.32■■■□□ 2.12
KATNB1-204ENST00000563127 ROBO2Q9HCK4 1378 aa28.32■■■□□ 2.12
KATNB1-204ENST00000563127 MYOM2P54296 1465 aa28.32■■■□□ 2.12
KATNB1-204ENST00000563127 NRXN1Q9ULB1 1477 aa28.3■■■□□ 2.12
KATNB1-204ENST00000563127 STAC3Q96MF2 364 aa28.29■■■□□ 2.12
KATNB1-204ENST00000563127 PTCH1Q13635 1447 aa28.28■■■□□ 2.12
KATNB1-204ENST00000563127 DHX57Q6P158 1386 aaKnown RBP28.27■■■□□ 2.12
KATNB1-204ENST00000563127 ROBO1Q9Y6N7 1651 aa28.27■■■□□ 2.12
KATNB1-204ENST00000563127 LRPPRCP42704 1394 aaKnown RBP28.26■■■□□ 2.12
KATNB1-204ENST00000563127 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
KATNB1-204ENST00000563127 ADGRL3Q9HAR2 1447 aa28.25■■■□□ 2.11
KATNB1-204ENST00000563127 ABCC11Q96J66 1382 aa28.24■■■□□ 2.11
KATNB1-204ENST00000563127 DCCP43146 1447 aa28.24■■■□□ 2.11
KATNB1-204ENST00000563127 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
KATNB1-204ENST00000563127 WAPLQ7Z5K2 1190 aa28.23■■■□□ 2.11
KATNB1-204ENST00000563127 SIN3AQ96ST3 1273 aa28.22■■■□□ 2.11
KATNB1-204ENST00000563127 YTHDC2Q9H6S0 1430 aaKnown RBP28.22■■■□□ 2.11
KATNB1-204ENST00000563127 NALCNQ8IZF0 1738 aa28.21■■■□□ 2.11
KATNB1-204ENST00000563127 LAMC1P11047 1609 aa28.19■■■□□ 2.1
KATNB1-204ENST00000563127 TECPR2O15040 1411 aa28.18■■■□□ 2.1
KATNB1-204ENST00000563127 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
KATNB1-204ENST00000563127 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
KATNB1-204ENST00000563127 SIRT1Q96EB6 747 aa28.16■■■□□ 2.1
KATNB1-204ENST00000563127 MST1RQ04912 1400 aa28.16■■■□□ 2.1
KATNB1-204ENST00000563127 DISP3Q9P2K9 1392 aa28.14■■■□□ 2.1
KATNB1-204ENST00000563127 PLEKHH1Q9ULM0 1364 aa28.14■■■□□ 2.1
KATNB1-204ENST00000563127 KNDC1Q76NI1 1749 aa28.14■■■□□ 2.1
KATNB1-204ENST00000563127 PHLPP1O60346 1717 aa28.12■■■□□ 2.09
KATNB1-204ENST00000563127 L3MBTL2Q969R5 705 aa28.11■■■□□ 2.09
KATNB1-204ENST00000563127 TRAK1Q9UPV9 953 aa28.1■■■□□ 2.09
KATNB1-204ENST00000563127 PRAM1Q96QH2 718 aa28.09■■■□□ 2.09
KATNB1-204ENST00000563127 ADGRB1O14514 1584 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms