RNA–Protein interactions for RNA: ENST00000563063.1

AC011840.2-201, humanhuman

BASIC

Gene AC011840.2, Length 1,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.2-201ENST00000563063 NUTM2DQ5VT03 806 aaPredicted RBP21.59■■□□□ 1.05
AC011840.2-201ENST00000563063 TMEM2Q9UHN6 1383 aa21.58■■□□□ 1.05
AC011840.2-201ENST00000563063 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.04
AC011840.2-201ENST00000563063 ARHGAP23Q9P227 1491 aa21.57■■□□□ 1.04
AC011840.2-201ENST00000563063 SLIT1O75093 1534 aa21.57■■□□□ 1.04
AC011840.2-201ENST00000563063 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
AC011840.2-201ENST00000563063 MYOM2P54296 1465 aa21.56■■□□□ 1.04
AC011840.2-201ENST00000563063 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
AC011840.2-201ENST00000563063 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
AC011840.2-201ENST00000563063 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.04
AC011840.2-201ENST00000563063 HSPA2P54652 639 aa21.52■■□□□ 1.04
AC011840.2-201ENST00000563063 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
AC011840.2-201ENST00000563063 LTKP29376 864 aa21.51■■□□□ 1.03
AC011840.2-201ENST00000563063 PRAG1Q86YV5 1406 aa21.51■■□□□ 1.03
AC011840.2-201ENST00000563063 SCAF11Q99590 1463 aaKnown RBP21.5■■□□□ 1.03
AC011840.2-201ENST00000563063 NRXN1Q9ULB1 1477 aa21.5■■□□□ 1.03
AC011840.2-201ENST00000563063 PPP1R15AO75807 674 aaPredicted RBP21.5■■□□□ 1.03
AC011840.2-201ENST00000563063 POLR1AO95602 1720 aaPredicted RBP21.49■■□□□ 1.03
AC011840.2-201ENST00000563063 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
AC011840.2-201ENST00000563063 TXNDC2Q86VQ3 553 aa21.48■■□□□ 1.03
AC011840.2-201ENST00000563063 PIK3C2GO75747 1445 aa21.48■■□□□ 1.03
AC011840.2-201ENST00000563063 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
AC011840.2-201ENST00000563063 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
AC011840.2-201ENST00000563063 VGFO15240 615 aaPredicted RBP21.46■■□□□ 1.03
AC011840.2-201ENST00000563063 EID1Q9Y6B2 187 aa21.46■■□□□ 1.03
AC011840.2-201ENST00000563063 NRXN3Q9Y4C0 1643 aa21.46■■□□□ 1.03
AC011840.2-201ENST00000563063 ANKLE2Q86XL3 938 aa21.44■■□□□ 1.02
AC011840.2-201ENST00000563063 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
AC011840.2-201ENST00000563063 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
AC011840.2-201ENST00000563063 TRPM1Q7Z4N2 1603 aa21.43■■□□□ 1.02
AC011840.2-201ENST00000563063 HDGFP51858 240 aaKnown RBP21.43■■□□□ 1.02
AC011840.2-201ENST00000563063 STAC3Q96MF2 364 aa21.43■■□□□ 1.02
AC011840.2-201ENST00000563063 SETBP1Q9Y6X0 1596 aa21.43■■□□□ 1.02
AC011840.2-201ENST00000563063 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
AC011840.2-201ENST00000563063 STRCQ7RTU9 1775 aa21.41■■□□□ 1.02
AC011840.2-201ENST00000563063 SETD1AO15047 1707 aaKnown RBP21.4■■□□□ 1.02
AC011840.2-201ENST00000563063 RALGAPBQ86X10 1494 aa21.4■■□□□ 1.02
AC011840.2-201ENST00000563063 ALKQ9UM73 1620 aa21.39■■□□□ 1.02
AC011840.2-201ENST00000563063 KIAA1210Q9ULL0 1709 aa21.39■■□□□ 1.01
AC011840.2-201ENST00000563063 NPHP4O75161 1426 aaPredicted RBP21.39■■□□□ 1.01
AC011840.2-201ENST00000563063 ADAMTS13Q76LX8 1427 aa21.39■■□□□ 1.01
AC011840.2-201ENST00000563063 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.01
AC011840.2-201ENST00000563063 BCANQ96GW7 911 aa21.39■■□□□ 1.01
AC011840.2-201ENST00000563063 LAMC1P11047 1609 aa21.39■■□□□ 1.01
AC011840.2-201ENST00000563063 MED14O60244 1454 aa21.38■■□□□ 1.01
AC011840.2-201ENST00000563063 ASXL1Q8IXJ9 1541 aa21.38■■□□□ 1.01
AC011840.2-201ENST00000563063 NBPF1Q3BBV0 1214 aa21.35■■□□□ 1.01
AC011840.2-201ENST00000563063 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
AC011840.2-201ENST00000563063 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
AC011840.2-201ENST00000563063 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
AC011840.2-201ENST00000563063 ADGRB1O14514 1584 aa21.34■■□□□ 1.01
AC011840.2-201ENST00000563063 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
AC011840.2-201ENST00000563063 METP08581 1390 aa21.31■■□□□ 1
AC011840.2-201ENST00000563063 TMEM132EQ6IEE7 984 aa21.31■■□□□ 1
AC011840.2-201ENST00000563063 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
AC011840.2-201ENST00000563063 GPRASP1Q5JY77 1395 aa21.3■■□□□ 1
AC011840.2-201ENST00000563063 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
AC011840.2-201ENST00000563063 TBX22Q9Y458 520 aa21.26■□□□□ 0.99
AC011840.2-201ENST00000563063 PTPRUQ92729 1446 aa21.25■□□□□ 0.99
AC011840.2-201ENST00000563063 YTHDC2Q9H6S0 1430 aaKnown RBP21.24■□□□□ 0.99
AC011840.2-201ENST00000563063 STK26Q9P289 416 aa21.23■□□□□ 0.99
AC011840.2-201ENST00000563063 XRN1Q8IZH2 1706 aaKnown RBP21.22■□□□□ 0.99
AC011840.2-201ENST00000563063 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
AC011840.2-201ENST00000563063 LRPPRCP42704 1394 aaKnown RBP21.21■□□□□ 0.99
AC011840.2-201ENST00000563063 USP47Q96K76 1375 aa21.21■□□□□ 0.99
AC011840.2-201ENST00000563063 CHD2O14647 1828 aaKnown RBP21.21■□□□□ 0.99
AC011840.2-201ENST00000563063 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
AC011840.2-201ENST00000563063 TRAK1Q9UPV9 953 aa21.2■□□□□ 0.98
AC011840.2-201ENST00000563063 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
AC011840.2-201ENST00000563063 NWD1Q149M9 1564 aa21.18■□□□□ 0.98
AC011840.2-201ENST00000563063 CPS1P31327 1500 aa21.18■□□□□ 0.98
AC011840.2-201ENST00000563063 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
AC011840.2-201ENST00000563063 TECPR2O15040 1411 aa21.17■□□□□ 0.98
AC011840.2-201ENST00000563063 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
AC011840.2-201ENST00000563063 DLC1Q96QB1 1528 aa21.16■□□□□ 0.98
AC011840.2-201ENST00000563063 ABCC11Q96J66 1382 aa21.16■□□□□ 0.98
AC011840.2-201ENST00000563063 DMRT2Q9Y5R5 561 aa21.15■□□□□ 0.98
AC011840.2-201ENST00000563063 ROBO2Q9HCK4 1378 aa21.15■□□□□ 0.98
AC011840.2-201ENST00000563063 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.98
AC011840.2-201ENST00000563063 KCNA6P17658 529 aa21.14■□□□□ 0.98
AC011840.2-201ENST00000563063 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
AC011840.2-201ENST00000563063 EIF3AQ14152 1382 aaKnown RBP21.13■□□□□ 0.97
AC011840.2-201ENST00000563063 PLEKHH1Q9ULM0 1364 aa21.13■□□□□ 0.97
AC011840.2-201ENST00000563063 PTCH1Q13635 1447 aa21.13■□□□□ 0.97
AC011840.2-201ENST00000563063 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
AC011840.2-201ENST00000563063 ZNF335Q9H4Z2 1342 aaPredicted RBP21.13■□□□□ 0.97
AC011840.2-201ENST00000563063 QRICH2Q9H0J4 1663 aa21.12■□□□□ 0.97
AC011840.2-201ENST00000563063 SAFB2Q14151 953 aaKnown RBP eCLIP21.11■□□□□ 0.97
AC011840.2-201ENST00000563063 PRAM1Q96QH2 718 aa21.11■□□□□ 0.97
AC011840.2-201ENST00000563063 ST20-MTHFSA0A0A6YYL1 179 aa21.1■□□□□ 0.97
AC011840.2-201ENST00000563063 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
AC011840.2-201ENST00000563063 WAPLQ7Z5K2 1190 aa21.1■□□□□ 0.97
AC011840.2-201ENST00000563063 NKTRP30414 1462 aaKnown RBP21.1■□□□□ 0.97
AC011840.2-201ENST00000563063 CENPJQ9HC77 1338 aaPredicted RBP21.09■□□□□ 0.97
AC011840.2-201ENST00000563063 FAM135BQ49AJ0 1406 aa21.09■□□□□ 0.97
AC011840.2-201ENST00000563063 POGKQ9P215 609 aa21.08■□□□□ 0.96
AC011840.2-201ENST00000563063 RBM33Q96EV2 1170 aaKnown RBP21.07■□□□□ 0.96
AC011840.2-201ENST00000563063 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.05■□□□□ 0.96
AC011840.2-201ENST00000563063 SIRT1Q96EB6 747 aa21.04■□□□□ 0.96
AC011840.2-201ENST00000563063 TESK2Q96S53 571 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms