RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 GCC2Q8IWJ2 1684 aa25.07■■□□□ 1.6
CDT1-202ENST00000562747 FAM135BQ49AJ0 1406 aa25.07■■□□□ 1.6
CDT1-202ENST00000562747 UNC13BO14795 1591 aa25.06■■□□□ 1.6
CDT1-202ENST00000562747 KCNA6P17658 529 aa25.06■■□□□ 1.6
CDT1-202ENST00000562747 RBM33Q96EV2 1170 aaKnown RBP25.06■■□□□ 1.6
CDT1-202ENST00000562747 RGS17Q9UGC6 210 aaPredicted RBP25.06■■□□□ 1.6
CDT1-202ENST00000562747 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
CDT1-202ENST00000562747 RPRD2Q5VT52 1461 aaKnown RBP25.04■■□□□ 1.6
CDT1-202ENST00000562747 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
CDT1-202ENST00000562747 TMEM131LA2VDJ0 1609 aa25.02■■□□□ 1.6
CDT1-202ENST00000562747 PROSER2Q86WR7 435 aaPredicted RBP25■■□□□ 1.59
CDT1-202ENST00000562747 NAIPQ13075 1403 aa25■■□□□ 1.59
CDT1-202ENST00000562747 CHD2O14647 1828 aaKnown RBP25■■□□□ 1.59
CDT1-202ENST00000562747 SLC52A1Q9NWF4 448 aa24.99■■□□□ 1.59
CDT1-202ENST00000562747 HFM1A2PYH4 1435 aa24.98■■□□□ 1.59
CDT1-202ENST00000562747 E9PCH4 1651 aa24.97■■□□□ 1.59
CDT1-202ENST00000562747 IQGAP3Q86VI3 1631 aa24.97■■□□□ 1.59
CDT1-202ENST00000562747 RIMS2Q9UQ26 1411 aa24.96■■□□□ 1.59
CDT1-202ENST00000562747 PLEKHG1Q9ULL1 1385 aa24.96■■□□□ 1.59
CDT1-202ENST00000562747 PHLPP1O60346 1717 aa24.94■■□□□ 1.58
CDT1-202ENST00000562747 NUP155O75694 1391 aa24.93■■□□□ 1.58
CDT1-202ENST00000562747 BCANQ96GW7 911 aa24.92■■□□□ 1.58
CDT1-202ENST00000562747 MSH6P52701 1360 aa24.92■■□□□ 1.58
CDT1-202ENST00000562747 POTEAQ6S8J7 498 aa24.89■■□□□ 1.58
CDT1-202ENST00000562747 ADAMTS13Q76LX8 1427 aa24.87■■□□□ 1.57
CDT1-202ENST00000562747 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
CDT1-202ENST00000562747 PPP1R15AO75807 674 aaPredicted RBP24.87■■□□□ 1.57
CDT1-202ENST00000562747 DIP2AQ14689 1571 aa24.85■■□□□ 1.57
CDT1-202ENST00000562747 SLAIN2Q9P270 581 aa24.85■■□□□ 1.57
CDT1-202ENST00000562747 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
CDT1-202ENST00000562747 NUTM2DQ5VT03 806 aaPredicted RBP24.83■■□□□ 1.57
CDT1-202ENST00000562747 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.83■■□□□ 1.57
CDT1-202ENST00000562747 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
CDT1-202ENST00000562747 TBX22Q9Y458 520 aa24.81■■□□□ 1.56
CDT1-202ENST00000562747 JCADQ9P266 1359 aa24.79■■□□□ 1.56
CDT1-202ENST00000562747 NCOA3Q9Y6Q9 1424 aa24.78■■□□□ 1.56
CDT1-202ENST00000562747 LRP6O75581 1613 aa24.78■■□□□ 1.56
CDT1-202ENST00000562747 NRXN3Q9Y4C0 1643 aa24.78■■□□□ 1.56
CDT1-202ENST00000562747 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
CDT1-202ENST00000562747 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.77■■□□□ 1.56
CDT1-202ENST00000562747 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
CDT1-202ENST00000562747 TRPM2O94759 1503 aa24.76■■□□□ 1.55
CDT1-202ENST00000562747 AHDC1Q5TGY3 1603 aaPredicted RBP24.76■■□□□ 1.55
CDT1-202ENST00000562747 PTPRUQ92729 1446 aa24.76■■□□□ 1.55
CDT1-202ENST00000562747 SPHKAPQ2M3C7 1700 aa24.75■■□□□ 1.55
CDT1-202ENST00000562747 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
CDT1-202ENST00000562747 XRN1Q8IZH2 1706 aaKnown RBP24.74■■□□□ 1.55
CDT1-202ENST00000562747 SHPRHQ149N8 1683 aa24.73■■□□□ 1.55
CDT1-202ENST00000562747 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
CDT1-202ENST00000562747 PIK3R4Q99570 1358 aa24.73■■□□□ 1.55
CDT1-202ENST00000562747 C14orf37Q86TY3 774 aa24.71■■□□□ 1.55
CDT1-202ENST00000562747 SETBP1Q9Y6X0 1596 aa24.7■■□□□ 1.54
CDT1-202ENST00000562747 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
CDT1-202ENST00000562747 C19orf44Q9H6X5 657 aa24.68■■□□□ 1.54
CDT1-202ENST00000562747 CADPS2Q86UW7 1296 aa24.66■■□□□ 1.54
CDT1-202ENST00000562747 AMOTL2Q9Y2J4 779 aa24.66■■□□□ 1.54
CDT1-202ENST00000562747 CLTCL1P53675 1640 aa24.64■■□□□ 1.54
CDT1-202ENST00000562747 SPATA31A6Q5VVP1 1343 aa24.64■■□□□ 1.54
CDT1-202ENST00000562747 ATF3P18847 181 aa24.64■■□□□ 1.54
CDT1-202ENST00000562747 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
CDT1-202ENST00000562747 ASXL1Q8IXJ9 1541 aa24.63■■□□□ 1.53
CDT1-202ENST00000562747 DCCP43146 1447 aa24.62■■□□□ 1.53
CDT1-202ENST00000562747 NHSL1Q5SYE7 1610 aa24.62■■□□□ 1.53
CDT1-202ENST00000562747 BRINP3Q76B58 766 aa24.62■■□□□ 1.53
CDT1-202ENST00000562747 NEXMIFQ5QGS0 1516 aa24.61■■□□□ 1.53
CDT1-202ENST00000562747 METP08581 1390 aa24.6■■□□□ 1.53
CDT1-202ENST00000562747 NALCNQ8IZF0 1738 aa24.6■■□□□ 1.53
CDT1-202ENST00000562747 MST1RQ04912 1400 aa24.6■■□□□ 1.53
CDT1-202ENST00000562747 MPHOSPH9Q99550 1183 aa24.59■■□□□ 1.53
CDT1-202ENST00000562747 HRCP23327 699 aa24.57■■□□□ 1.52
CDT1-202ENST00000562747 MEX3CQ5U5Q3 659 aaKnown RBP24.57■■□□□ 1.52
CDT1-202ENST00000562747 ZNF326Q5BKZ1 582 aaKnown RBP24.54■■□□□ 1.52
CDT1-202ENST00000562747 ADGRL3Q9HAR2 1447 aa24.53■■□□□ 1.52
CDT1-202ENST00000562747 KIF1BO60333 1816 aa24.53■■□□□ 1.52
CDT1-202ENST00000562747 ZNF772Q68DY9 489 aaPredicted RBP24.52■■□□□ 1.52
CDT1-202ENST00000562747 FOXD1Q16676 465 aa24.51■■□□□ 1.51
CDT1-202ENST00000562747 NUTM2BA6NNL0 878 aaPredicted RBP24.5■■□□□ 1.51
CDT1-202ENST00000562747 NUTM2EB1AL46 878 aaPredicted RBP24.5■■□□□ 1.51
CDT1-202ENST00000562747 NUTM2AQ8IVF1 878 aaPredicted RBP24.5■■□□□ 1.51
CDT1-202ENST00000562747 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
CDT1-202ENST00000562747 CCDC144AA2RUR9 1427 aa24.45■■□□□ 1.51
CDT1-202ENST00000562747 UPF1Q92900 1129 aaKnown RBP eCLIP24.45■■□□□ 1.5
CDT1-202ENST00000562747 PNPLA6Q8IY17 1366 aa24.44■■□□□ 1.5
CDT1-202ENST00000562747 LAMC1P11047 1609 aa24.44■■□□□ 1.5
CDT1-202ENST00000562747 AFF2P51816 1311 aa24.43■■□□□ 1.5
CDT1-202ENST00000562747 CDK12Q9NYV4 1490 aaPredicted RBP24.43■■□□□ 1.5
CDT1-202ENST00000562747 PTCH1Q13635 1447 aa24.42■■□□□ 1.5
CDT1-202ENST00000562747 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
CDT1-202ENST00000562747 RXRBP28702 533 aa24.41■■□□□ 1.5
CDT1-202ENST00000562747 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
CDT1-202ENST00000562747 PPLO60437 1756 aa24.4■■□□□ 1.5
CDT1-202ENST00000562747 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.49
CDT1-202ENST00000562747 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
CDT1-202ENST00000562747 RGS12O14924 1447 aa24.37■■□□□ 1.49
CDT1-202ENST00000562747 PRAG1Q86YV5 1406 aa24.37■■□□□ 1.49
CDT1-202ENST00000562747 C8orf37Q96NL8 207 aa24.35■■□□□ 1.49
CDT1-202ENST00000562747 SPATA31E1Q6ZUB1 1445 aa24.35■■□□□ 1.49
CDT1-202ENST00000562747 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.49
CDT1-202ENST00000562747 VGFO15240 615 aaPredicted RBP24.33■■□□□ 1.49
CDT1-202ENST00000562747 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms