RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 MYO5BQ9ULV0 1848 aa23.17■■□□□ 1.3
KLHDC4-208ENST00000562261 NUP155O75694 1391 aa23.16■■□□□ 1.3
KLHDC4-208ENST00000562261 TMEM131LA2VDJ0 1609 aa23.16■■□□□ 1.3
KLHDC4-208ENST00000562261 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
KLHDC4-208ENST00000562261 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
KLHDC4-208ENST00000562261 SLC26A8Q96RN1 970 aa23.12■■□□□ 1.29
KLHDC4-208ENST00000562261 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
KLHDC4-208ENST00000562261 KCNA6P17658 529 aa23.09■■□□□ 1.29
KLHDC4-208ENST00000562261 HDGFP51858 240 aaKnown RBP23.08■■□□□ 1.29
KLHDC4-208ENST00000562261 RGS17Q9UGC6 210 aaPredicted RBP23.08■■□□□ 1.29
KLHDC4-208ENST00000562261 PLEKHG1Q9ULL1 1385 aa23.08■■□□□ 1.29
KLHDC4-208ENST00000562261 NWD1Q149M9 1564 aa23.07■■□□□ 1.28
KLHDC4-208ENST00000562261 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
KLHDC4-208ENST00000562261 BCANQ96GW7 911 aa23.07■■□□□ 1.28
KLHDC4-208ENST00000562261 PPP1R15AO75807 674 aaPredicted RBP23.06■■□□□ 1.28
KLHDC4-208ENST00000562261 TMEM94Q12767 1356 aa23.04■■□□□ 1.28
KLHDC4-208ENST00000562261 NAIPQ13075 1403 aa23.04■■□□□ 1.28
KLHDC4-208ENST00000562261 SPHKAPQ2M3C7 1700 aa23.04■■□□□ 1.28
KLHDC4-208ENST00000562261 NKTRP30414 1462 aaKnown RBP23.04■■□□□ 1.28
KLHDC4-208ENST00000562261 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.03■■□□□ 1.28
KLHDC4-208ENST00000562261 PROSER2Q86WR7 435 aaPredicted RBP23.01■■□□□ 1.27
KLHDC4-208ENST00000562261 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
KLHDC4-208ENST00000562261 NUTM2DQ5VT03 806 aaPredicted RBP22.98■■□□□ 1.27
KLHDC4-208ENST00000562261 DIP2AQ14689 1571 aa22.97■■□□□ 1.27
KLHDC4-208ENST00000562261 RBM33Q96EV2 1170 aaKnown RBP22.97■■□□□ 1.27
KLHDC4-208ENST00000562261 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
KLHDC4-208ENST00000562261 HFM1A2PYH4 1435 aa22.97■■□□□ 1.27
KLHDC4-208ENST00000562261 ADAMTS13Q76LX8 1427 aa22.97■■□□□ 1.27
KLHDC4-208ENST00000562261 TRPM2O94759 1503 aa22.93■■□□□ 1.26
KLHDC4-208ENST00000562261 FAM135BQ49AJ0 1406 aa22.93■■□□□ 1.26
KLHDC4-208ENST00000562261 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
KLHDC4-208ENST00000562261 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
KLHDC4-208ENST00000562261 MSH6P52701 1360 aa22.91■■□□□ 1.26
KLHDC4-208ENST00000562261 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
KLHDC4-208ENST00000562261 ROBO1Q9Y6N7 1651 aa22.89■■□□□ 1.25
KLHDC4-208ENST00000562261 ZNF326Q5BKZ1 582 aaKnown RBP22.88■■□□□ 1.25
KLHDC4-208ENST00000562261 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
KLHDC4-208ENST00000562261 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
KLHDC4-208ENST00000562261 NCOA3Q9Y6Q9 1424 aa22.87■■□□□ 1.25
KLHDC4-208ENST00000562261 SETBP1Q9Y6X0 1596 aa22.87■■□□□ 1.25
KLHDC4-208ENST00000562261 KIF1BO60333 1816 aa22.87■■□□□ 1.25
KLHDC4-208ENST00000562261 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
KLHDC4-208ENST00000562261 PTPRUQ92729 1446 aa22.83■■□□□ 1.25
KLHDC4-208ENST00000562261 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
KLHDC4-208ENST00000562261 SLAIN2Q9P270 581 aa22.81■■□□□ 1.24
KLHDC4-208ENST00000562261 AMOTL2Q9Y2J4 779 aa22.81■■□□□ 1.24
KLHDC4-208ENST00000562261 C14orf37Q86TY3 774 aa22.8■■□□□ 1.24
KLHDC4-208ENST00000562261 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
KLHDC4-208ENST00000562261 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.79■■□□□ 1.24
KLHDC4-208ENST00000562261 METP08581 1390 aa22.76■■□□□ 1.23
KLHDC4-208ENST00000562261 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
KLHDC4-208ENST00000562261 PHLPP1O60346 1717 aa22.75■■□□□ 1.23
KLHDC4-208ENST00000562261 CADPS2Q86UW7 1296 aa22.75■■□□□ 1.23
KLHDC4-208ENST00000562261 SETD1AO15047 1707 aaKnown RBP22.74■■□□□ 1.23
KLHDC4-208ENST00000562261 ATF3P18847 181 aa22.73■■□□□ 1.23
KLHDC4-208ENST00000562261 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
KLHDC4-208ENST00000562261 FOXD1Q16676 465 aa22.71■■□□□ 1.23
KLHDC4-208ENST00000562261 RPGRIP1LQ68CZ1 1315 aa22.7■■□□□ 1.22
KLHDC4-208ENST00000562261 DCCP43146 1447 aa22.7■■□□□ 1.22
KLHDC4-208ENST00000562261 PPLO60437 1756 aa22.7■■□□□ 1.22
KLHDC4-208ENST00000562261 COL16A1Q07092 1604 aaPredicted RBP22.68■■□□□ 1.22
KLHDC4-208ENST00000562261 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
KLHDC4-208ENST00000562261 CCDC144AA2RUR9 1427 aa22.66■■□□□ 1.22
KLHDC4-208ENST00000562261 AHDC1Q5TGY3 1603 aaPredicted RBP22.66■■□□□ 1.22
KLHDC4-208ENST00000562261 JCADQ9P266 1359 aa22.65■■□□□ 1.22
KLHDC4-208ENST00000562261 ADGRL3Q9HAR2 1447 aa22.64■■□□□ 1.21
KLHDC4-208ENST00000562261 NALCNQ8IZF0 1738 aa22.63■■□□□ 1.21
KLHDC4-208ENST00000562261 PTCH1Q13635 1447 aa22.63■■□□□ 1.21
KLHDC4-208ENST00000562261 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
KLHDC4-208ENST00000562261 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
KLHDC4-208ENST00000562261 UPF1Q92900 1129 aaKnown RBP eCLIP22.62■■□□□ 1.21
KLHDC4-208ENST00000562261 MST1RQ04912 1400 aa22.62■■□□□ 1.21
KLHDC4-208ENST00000562261 SPATA31E1Q6ZUB1 1445 aa22.61■■□□□ 1.21
KLHDC4-208ENST00000562261 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
KLHDC4-208ENST00000562261 PRAG1Q86YV5 1406 aa22.6■■□□□ 1.21
KLHDC4-208ENST00000562261 ASXL1Q8IXJ9 1541 aa22.6■■□□□ 1.21
KLHDC4-208ENST00000562261 IFT172Q9UG01 1749 aa22.59■■□□□ 1.21
KLHDC4-208ENST00000562261 ROBO2Q9HCK4 1378 aa22.58■■□□□ 1.21
KLHDC4-208ENST00000562261 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
KLHDC4-208ENST00000562261 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
KLHDC4-208ENST00000562261 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
KLHDC4-208ENST00000562261 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
KLHDC4-208ENST00000562261 MEX3CQ5U5Q3 659 aaKnown RBP22.55■■□□□ 1.2
KLHDC4-208ENST00000562261 NHSL1Q5SYE7 1610 aa22.55■■□□□ 1.2
KLHDC4-208ENST00000562261 SPATA31A6Q5VVP1 1343 aa22.55■■□□□ 1.2
KLHDC4-208ENST00000562261 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
KLHDC4-208ENST00000562261 ZNF772Q68DY9 489 aaPredicted RBP22.52■■□□□ 1.2
KLHDC4-208ENST00000562261 LRP6O75581 1613 aa22.52■■□□□ 1.2
KLHDC4-208ENST00000562261 C1orf167Q5SNV9 1468 aa22.51■■□□□ 1.19
KLHDC4-208ENST00000562261 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
KLHDC4-208ENST00000562261 TECPR2O15040 1411 aa22.46■■□□□ 1.19
KLHDC4-208ENST00000562261 RXRBP28702 533 aa22.45■■□□□ 1.18
KLHDC4-208ENST00000562261 DDX17Q92841 729 aaKnown RBP22.45■■□□□ 1.18
KLHDC4-208ENST00000562261 LRPPRCP42704 1394 aaKnown RBP22.45■■□□□ 1.18
KLHDC4-208ENST00000562261 LAMC1P11047 1609 aa22.45■■□□□ 1.18
KLHDC4-208ENST00000562261 KNDC1Q76NI1 1749 aa22.45■■□□□ 1.18
KLHDC4-208ENST00000562261 CDC42BPGQ6DT37 1551 aa22.44■■□□□ 1.18
KLHDC4-208ENST00000562261 LRRC59Q96AG4 307 aaKnown RBP22.44■■□□□ 1.18
KLHDC4-208ENST00000562261 STK26Q9P289 416 aa22.43■■□□□ 1.18
KLHDC4-208ENST00000562261 MYOM2P54296 1465 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms