RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 ZMYM3Q14202 1370 aa12.86□□□□□ -0.35
TCF4-211ENST00000561992 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
TCF4-211ENST00000561992 CDCA8Q53HL2 280 aa12.86□□□□□ -0.35
TCF4-211ENST00000561992 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
TCF4-211ENST00000561992 ATP10BO94823 1461 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 PANK3Q9H999 370 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 PREX2Q70Z35 1606 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 SYNMO15061 1565 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
TCF4-211ENST00000561992 PLIN1O60240 522 aa12.84□□□□□ -0.35
TCF4-211ENST00000561992 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
TCF4-211ENST00000561992 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
TCF4-211ENST00000561992 AAMPQ13685 434 aa12.84□□□□□ -0.35
TCF4-211ENST00000561992 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
TCF4-211ENST00000561992 PLA2R1Q13018 1463 aa12.84□□□□□ -0.35
TCF4-211ENST00000561992 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
TCF4-211ENST00000561992 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
TCF4-211ENST00000561992 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
TCF4-211ENST00000561992 MAGI2Q86UL8 1455 aa12.83□□□□□ -0.36
TCF4-211ENST00000561992 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
TCF4-211ENST00000561992 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
TCF4-211ENST00000561992 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
TCF4-211ENST00000561992 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
TCF4-211ENST00000561992 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
TCF4-211ENST00000561992 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
TCF4-211ENST00000561992 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
TCF4-211ENST00000561992 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
TCF4-211ENST00000561992 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
TCF4-211ENST00000561992 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
TCF4-211ENST00000561992 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
TCF4-211ENST00000561992 PPP6R1Q9UPN7 881 aa12.8□□□□□ -0.36
TCF4-211ENST00000561992 ASXL1Q8IXJ9 1541 aa12.8□□□□□ -0.36
TCF4-211ENST00000561992 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
TCF4-211ENST00000561992 NKTRP30414 1462 aaKnown RBP12.8□□□□□ -0.36
TCF4-211ENST00000561992 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
TCF4-211ENST00000561992 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
TCF4-211ENST00000561992 IQGAP1P46940 1657 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 BECN1Q14457 450 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 C20orf194Q5TEA3 1177 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 CGNL1Q0VF96 1302 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 PDE3AQ14432 1141 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
TCF4-211ENST00000561992 UBE2Q2Q8WVN8 375 aa12.78□□□□□ -0.36
TCF4-211ENST00000561992 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.36
TCF4-211ENST00000561992 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.37
TCF4-211ENST00000561992 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.37
TCF4-211ENST00000561992 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.37
TCF4-211ENST00000561992 E9PSI1 815 aa12.77□□□□□ -0.37
TCF4-211ENST00000561992 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
TCF4-211ENST00000561992 CDC42BPBQ9Y5S2 1711 aa12.76□□□□□ -0.37
TCF4-211ENST00000561992 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.377e-6■■■□□ 17
TCF4-211ENST00000561992 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
TCF4-211ENST00000561992 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
TCF4-211ENST00000561992 MADDQ8WXG6 1647 aa12.75□□□□□ -0.37
TCF4-211ENST00000561992 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
TCF4-211ENST00000561992 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
TCF4-211ENST00000561992 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
TCF4-211ENST00000561992 KIAA1210Q9ULL0 1709 aa12.73□□□□□ -0.37
TCF4-211ENST00000561992 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
TCF4-211ENST00000561992 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
TCF4-211ENST00000561992 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
TCF4-211ENST00000561992 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
TCF4-211ENST00000561992 SKAP1Q86WV1 359 aa12.71□□□□□ -0.37
TCF4-211ENST00000561992 USP19O94966 1318 aa12.71□□□□□ -0.37
TCF4-211ENST00000561992 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.38
TCF4-211ENST00000561992 TRPM2O94759 1503 aa12.7□□□□□ -0.38
TCF4-211ENST00000561992 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
TCF4-211ENST00000561992 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
TCF4-211ENST00000561992 RGS3P49796 1198 aa12.69□□□□□ -0.38
TCF4-211ENST00000561992 KDM5AP29375 1690 aaKnown RBP12.69□□□□□ -0.38
TCF4-211ENST00000561992 MYOM1P52179 1685 aa12.69□□□□□ -0.38
TCF4-211ENST00000561992 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
TCF4-211ENST00000561992 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
TCF4-211ENST00000561992 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
TCF4-211ENST00000561992 PTPRTO14522 1441 aa12.67□□□□□ -0.38
TCF4-211ENST00000561992 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
TCF4-211ENST00000561992 CEP152O94986 1710 aa12.67□□□□□ -0.38
TCF4-211ENST00000561992 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.67□□□□□ -0.38
TCF4-211ENST00000561992 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
TCF4-211ENST00000561992 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
TCF4-211ENST00000561992 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
TCF4-211ENST00000561992 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
TCF4-211ENST00000561992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.65□□□□□ -0.38
TCF4-211ENST00000561992 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
TCF4-211ENST00000561992 APAF1O14727 1248 aa12.64□□□□□ -0.39
TCF4-211ENST00000561992 IGHDP01880 384 aa12.64□□□□□ -0.39
TCF4-211ENST00000561992 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
TCF4-211ENST00000561992 TBC1D32Q96NH3 1257 aa12.64□□□□□ -0.39
TCF4-211ENST00000561992 KANK1Q14678 1352 aa12.64□□□□□ -0.39
TCF4-211ENST00000561992 SBNO2Q9Y2G9 1366 aa12.64□□□□□ -0.39
TCF4-211ENST00000561992 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
TCF4-211ENST00000561992 MYOM2P54296 1465 aa12.63□□□□□ -0.39
TCF4-211ENST00000561992 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
TCF4-211ENST00000561992 BCAR3O75815 825 aa12.62□□□□□ -0.39
TCF4-211ENST00000561992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms