RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TROQ12816 1431 aaPredicted RBP8.92□□□□□ -0.98
HERC1-213ENST00000561359 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
HERC1-213ENST00000561359 THEMISQ8N1K5 641 aaPredicted RBP8.92□□□□□ -0.98
HERC1-213ENST00000561359 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
HERC1-213ENST00000561359 LRRC7Q96NW7 1537 aa8.91□□□□□ -0.98
HERC1-213ENST00000561359 TNRQ92752 1358 aa8.91□□□□□ -0.98
HERC1-213ENST00000561359 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
HERC1-213ENST00000561359 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
HERC1-213ENST00000561359 KIDINS220Q9ULH0 1771 aa8.91□□□□□ -0.98
HERC1-213ENST00000561359 ABCC1P33527 1531 aa8.9□□□□□ -0.98
HERC1-213ENST00000561359 IER5LQ5T953 404 aa8.9□□□□□ -0.98
HERC1-213ENST00000561359 FBXO31Q5XUX0 539 aaPredicted RBP8.9□□□□□ -0.98
HERC1-213ENST00000561359 RNF17Q9BXT8 1623 aaKnown RBP8.9□□□□□ -0.99
HERC1-213ENST00000561359 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
HERC1-213ENST00000561359 POLR1AO95602 1720 aaPredicted RBP8.88□□□□□ -0.99
HERC1-213ENST00000561359 RIOK3O14730 519 aaKnown RBP8.88□□□□□ -0.99
HERC1-213ENST00000561359 HNRNPMP52272 730 aaKnown RBP eCLIP8.88□□□□□ -0.99
HERC1-213ENST00000561359 MKRN3Q13064 507 aaKnown RBP8.88□□□□□ -0.99
HERC1-213ENST00000561359 A2MP01023 1474 aa8.88□□□□□ -0.99
HERC1-213ENST00000561359 FAM135BQ49AJ0 1406 aa8.88□□□□□ -0.99
HERC1-213ENST00000561359 FAM135AQ9P2D6 1515 aa8.87□□□□□ -0.99
HERC1-213ENST00000561359 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
HERC1-213ENST00000561359 PLCG2P16885 1265 aa8.87□□□□□ -0.99
HERC1-213ENST00000561359 MED14O60244 1454 aa8.87□□□□□ -0.99
HERC1-213ENST00000561359 SAMD9LQ8IVG5 1584 aa8.86□□□□□ -0.99
HERC1-213ENST00000561359 ITSN2Q9NZM3 1697 aa8.86□□□□□ -0.99
HERC1-213ENST00000561359 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
HERC1-213ENST00000561359 FMN1Q68DA7 1419 aa8.86□□□□□ -0.99
HERC1-213ENST00000561359 CDC42BPBQ9Y5S2 1711 aa8.85□□□□□ -0.99
HERC1-213ENST00000561359 MEX3CQ5U5Q3 659 aaKnown RBP8.85□□□□□ -0.99
HERC1-213ENST00000561359 ZNF772Q68DY9 489 aaPredicted RBP8.85□□□□□ -0.99
HERC1-213ENST00000561359 SYNMO15061 1565 aa8.84□□□□□ -0.99
HERC1-213ENST00000561359 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
HERC1-213ENST00000561359 CABP2Q9NPB3 220 aa8.84□□□□□ -0.99
HERC1-213ENST00000561359 UGGT1Q9NYU2 1555 aa8.84□□□□□ -0.99
HERC1-213ENST00000561359 DEPDC5O75140 1603 aa8.83□□□□□ -1
HERC1-213ENST00000561359 POTEFA5A3E0 1075 aa8.83□□□□□ -1
HERC1-213ENST00000561359 RXRBP28702 533 aa8.83□□□□□ -1
HERC1-213ENST00000561359 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
HERC1-213ENST00000561359 RNF25Q96BH1 459 aaPredicted RBP8.83□□□□□ -1
HERC1-213ENST00000561359 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
HERC1-213ENST00000561359 IQGAP1P46940 1657 aa8.83□□□□□ -1
HERC1-213ENST00000561359 ATP7AQ04656 1500 aa8.83□□□□□ -1
HERC1-213ENST00000561359 SYCP2Q9BX26 1530 aa8.83□□□□□ -1
HERC1-213ENST00000561359 STRCP1A6NGW2 1772 aa8.83□□□□□ -1
HERC1-213ENST00000561359 PREX2Q70Z35 1606 aa8.83□□□□□ -1
HERC1-213ENST00000561359 NLRP1Q9C000 1473 aa8.83□□□□□ -1
HERC1-213ENST00000561359 WASHC2CQ9Y4E1 1318 aa8.82□□□□□ -1
HERC1-213ENST00000561359 PLXNC1O60486 1568 aa8.82□□□□□ -1
HERC1-213ENST00000561359 KIF3BO15066 747 aa8.82□□□□□ -1
HERC1-213ENST00000561359 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
HERC1-213ENST00000561359 OCEL1Q9H607 264 aa8.82□□□□□ -1
HERC1-213ENST00000561359 JCADQ9P266 1359 aa8.82□□□□□ -1
HERC1-213ENST00000561359 PZPP20742 1482 aa8.82□□□□□ -1
HERC1-213ENST00000561359 IRX5P78411 483 aaPredicted RBP8.81□□□□□ -1
HERC1-213ENST00000561359 SCUBE2Q9NQ36 999 aa8.81□□□□□ -1
HERC1-213ENST00000561359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
HERC1-213ENST00000561359 OTUD5Q96G74 571 aa8.8□□□□□ -1
HERC1-213ENST00000561359 ZFP91Q96JP5 570 aaPredicted RBP8.8□□□□□ -1
HERC1-213ENST00000561359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -1
HERC1-213ENST00000561359 TMEM94Q12767 1356 aa8.79□□□□□ -1
HERC1-213ENST00000561359 CFDP1Q9UEE9 299 aaPredicted RBP8.79□□□□□ -1
HERC1-213ENST00000561359 KIAA1107Q9UPP5 1409 aa8.79□□□□□ -1
HERC1-213ENST00000561359 DHX29Q7Z478 1369 aaKnown RBP8.78□□□□□ -1
HERC1-213ENST00000561359 POTEJP0CG39 1038 aa8.78□□□□□ -1
HERC1-213ENST00000561359 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
HERC1-213ENST00000561359 TXNDC2Q86VQ3 553 aa8.78□□□□□ -1
HERC1-213ENST00000561359 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
HERC1-213ENST00000561359 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
HERC1-213ENST00000561359 KDM5DQ9BY66 1539 aa8.78□□□□□ -1
HERC1-213ENST00000561359 PLEKHH2Q8IVE3 1493 aa8.77□□□□□ -1
HERC1-213ENST00000561359 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
HERC1-213ENST00000561359 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
HERC1-213ENST00000561359 RGL2O15211 777 aa8.77□□□□□ -1.01
HERC1-213ENST00000561359 NUTM2DQ5VT03 806 aaPredicted RBP8.77□□□□□ -1.01
HERC1-213ENST00000561359 NUTM2AQ8IVF1 878 aaPredicted RBP8.77□□□□□ -1.01
HERC1-213ENST00000561359 ROBO1Q9Y6N7 1651 aa8.77□□□□□ -1.01
HERC1-213ENST00000561359 INO80Q9ULG1 1556 aaPredicted RBP8.77□□□□□ -1.01
HERC1-213ENST00000561359 SPATA31A6Q5VVP1 1343 aa8.77□□□□□ -1.01
HERC1-213ENST00000561359 SCAF11Q99590 1463 aaKnown RBP8.77□□□□□ -1.01
HERC1-213ENST00000561359 LTKP29376 864 aa8.76□□□□□ -1.01
HERC1-213ENST00000561359 SLAIN2Q9P270 581 aa8.76□□□□□ -1.01
HERC1-213ENST00000561359 EID1Q9Y6B2 187 aa8.76□□□□□ -1.01
HERC1-213ENST00000561359 EEA1Q15075 1411 aa8.75□□□□□ -1.01
HERC1-213ENST00000561359 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
HERC1-213ENST00000561359 LRP6O75581 1613 aa8.75□□□□□ -1.01
HERC1-213ENST00000561359 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
HERC1-213ENST00000561359 ARHGAP35Q9NRY4 1499 aa8.75□□□□□ -1.01
HERC1-213ENST00000561359 CDK12Q9NYV4 1490 aaPredicted RBP8.75□□□□□ -1.01
HERC1-213ENST00000561359 GPATCH8Q9UKJ3 1502 aaKnown RBP8.75□□□□□ -1.01
HERC1-213ENST00000561359 CDC42BPAQ5VT25 1732 aa8.74□□□□□ -1.01
HERC1-213ENST00000561359 STK25O00506 426 aa8.74□□□□□ -1.01
HERC1-213ENST00000561359 KCNA6P17658 529 aa8.74□□□□□ -1.01
HERC1-213ENST00000561359 EFCAB3Q8N7B9 438 aa8.74□□□□□ -1.01
HERC1-213ENST00000561359 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
HERC1-213ENST00000561359 MSH6P52701 1360 aa8.73□□□□□ -1.01
HERC1-213ENST00000561359 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
HERC1-213ENST00000561359 ADGBQ8N7X0 1667 aa8.73□□□□□ -1.01
HERC1-213ENST00000561359 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
HERC1-213ENST00000561359 AFF2P51816 1311 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms