RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 CLCN1P35523 988 aa10.83□□□□□ -0.68
USP8-218ENST00000561330 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
USP8-218ENST00000561330 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
USP8-218ENST00000561330 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
USP8-218ENST00000561330 DAXXQ9UER7 740 aaPredicted RBP10.83□□□□□ -0.68
USP8-218ENST00000561330 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
USP8-218ENST00000561330 PDE4DQ08499 809 aa10.81□□□□□ -0.68
USP8-218ENST00000561330 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
USP8-218ENST00000561330 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
USP8-218ENST00000561330 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
USP8-218ENST00000561330 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
USP8-218ENST00000561330 RNF40O75150 1001 aa10.79□□□□□ -0.68
USP8-218ENST00000561330 BCAMP50895 628 aa10.79□□□□□ -0.68
USP8-218ENST00000561330 THSD4Q6ZMP0 1018 aa10.78□□□□□ -0.68
USP8-218ENST00000561330 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
USP8-218ENST00000561330 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.69
USP8-218ENST00000561330 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
USP8-218ENST00000561330 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
USP8-218ENST00000561330 SULF1Q8IWU6 871 aa10.76□□□□□ -0.69
USP8-218ENST00000561330 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
USP8-218ENST00000561330 DDX11L8A8MPP1 907 aa10.75□□□□□ -0.69
USP8-218ENST00000561330 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
USP8-218ENST00000561330 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
USP8-218ENST00000561330 PPP4CP60510 307 aa10.74□□□□□ -0.69
USP8-218ENST00000561330 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
USP8-218ENST00000561330 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
USP8-218ENST00000561330 PTPN5P54829 565 aa10.73□□□□□ -0.69
USP8-218ENST00000561330 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
USP8-218ENST00000561330 RDH13Q8NBN7 331 aa10.73□□□□□ -0.69
USP8-218ENST00000561330 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
USP8-218ENST00000561330 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
USP8-218ENST00000561330 SLC10A3P09131 477 aa10.7□□□□□ -0.7
USP8-218ENST00000561330 GPBP1L1Q9HC44 474 aaPredicted RBP10.7□□□□□ -0.7
USP8-218ENST00000561330 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
USP8-218ENST00000561330 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
USP8-218ENST00000561330 CD46P15529 392 aa10.69□□□□□ -0.7
USP8-218ENST00000561330 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
USP8-218ENST00000561330 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
USP8-218ENST00000561330 CFHP08603 1231 aa10.67□□□□□ -0.7
USP8-218ENST00000561330 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
USP8-218ENST00000561330 MS4A1P11836 297 aa10.66□□□□□ -0.7
USP8-218ENST00000561330 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
USP8-218ENST00000561330 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
USP8-218ENST00000561330 GCGRP47871 477 aa10.65□□□□□ -0.7
USP8-218ENST00000561330 BEGAINQ9BUH8 593 aa10.64□□□□□ -0.71
USP8-218ENST00000561330 APLP1P51693 650 aa10.63□□□□□ -0.71
USP8-218ENST00000561330 ACTN4O43707 911 aaKnown RBP10.61□□□□□ -0.71
USP8-218ENST00000561330 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
USP8-218ENST00000561330 KDM4AO75164 1064 aa10.6□□□□□ -0.71
USP8-218ENST00000561330 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
USP8-218ENST00000561330 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
USP8-218ENST00000561330 USP46P62068 366 aa10.58□□□□□ -0.72
USP8-218ENST00000561330 FUT2Q10981 343 aa10.58□□□□□ -0.72
USP8-218ENST00000561330 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
USP8-218ENST00000561330 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
USP8-218ENST00000561330 ATP6V1AP38606 617 aa10.56□□□□□ -0.72
USP8-218ENST00000561330 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
USP8-218ENST00000561330 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
USP8-218ENST00000561330 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
USP8-218ENST00000561330 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
USP8-218ENST00000561330 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
USP8-218ENST00000561330 PUS10Q3MIT2 529 aaKnown RBP10.53□□□□□ -0.72
USP8-218ENST00000561330 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
USP8-218ENST00000561330 HOXA2O43364 376 aa10.52□□□□□ -0.73
USP8-218ENST00000561330 COPS2P61201 443 aa10.52□□□□□ -0.73
USP8-218ENST00000561330 BLOC1S3Q6QNY0 202 aa10.52□□□□□ -0.73
USP8-218ENST00000561330 NR1I2O75469 434 aa10.51□□□□□ -0.73
USP8-218ENST00000561330 MORN1Q5T089 497 aa10.51□□□□□ -0.73
USP8-218ENST00000561330 MTRQ99707 1265 aa10.51□□□□□ -0.73
USP8-218ENST00000561330 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
USP8-218ENST00000561330 TJAP1Q5JTD0 557 aa10.5□□□□□ -0.73
USP8-218ENST00000561330 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
USP8-218ENST00000561330 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
USP8-218ENST00000561330 NDUFV2P19404 249 aa10.48□□□□□ -0.73
USP8-218ENST00000561330 SCUBE3Q8IX30 993 aa10.48□□□□□ -0.73
USP8-218ENST00000561330 SLC27A5Q9Y2P5 690 aa10.48□□□□□ -0.73
USP8-218ENST00000561330 FDX1P10109 184 aa10.47□□□□□ -0.73
USP8-218ENST00000561330 SH3D19Q5HYK7 790 aa10.47□□□□□ -0.73
USP8-218ENST00000561330 HLA-CQ95604 372 aa10.47□□□□□ -0.73
USP8-218ENST00000561330 SPTLC1O15269 473 aa10.46□□□□□ -0.73
USP8-218ENST00000561330 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.73
USP8-218ENST00000561330 GJA5P36382 358 aa10.46□□□□□ -0.73
USP8-218ENST00000561330 GUCA2AQ02747 115 aa10.46□□□□□ -0.73
USP8-218ENST00000561330 KCNC4Q03721 635 aa10.46□□□□□ -0.73
USP8-218ENST00000561330 RSBN1LQ6PCB5 846 aaPredicted RBP10.46□□□□□ -0.73
USP8-218ENST00000561330 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
USP8-218ENST00000561330 POLR3EQ9NVU0 708 aa10.46□□□□□ -0.73
USP8-218ENST00000561330 ZPR1O75312 459 aa10.45□□□□□ -0.74
USP8-218ENST00000561330 SKIV2LQ15477 1246 aaKnown RBP10.45□□□□□ -0.74
USP8-218ENST00000561330 Q3C1V9 767 aa10.45□□□□□ -0.74
USP8-218ENST00000561330 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
USP8-218ENST00000561330 GOPCQ9HD26 462 aa10.44□□□□□ -0.74
USP8-218ENST00000561330 CLK2P49760 499 aaKnown RBP10.43□□□□□ -0.74
USP8-218ENST00000561330 ATP1B4Q9UN42 357 aaPredicted RBP10.43□□□□□ -0.74
USP8-218ENST00000561330 PCDHGC3Q9UN70 934 aa10.43□□□□□ -0.74
USP8-218ENST00000561330 SALL2Q9Y467 1007 aaPredicted RBP10.43□□□□□ -0.74
USP8-218ENST00000561330 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
USP8-218ENST00000561330 LIMD1Q9UGP4 676 aa10.42□□□□□ -0.74
USP8-218ENST00000561330 CSPP1Q1MSJ5 1256 aa10.41□□□□□ -0.74
USP8-218ENST00000561330 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms