RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	NLRP1	Q9C000	1473 aa		11.55	□□□□□ -0.56
ZEB1-223	ENST00000561304	CHIC2	Q9UKJ5	165 aa		11.54	□□□□□ -0.56
ZEB1-223	ENST00000561304	IQGAP1	P46940	1657 aa		11.54	□□□□□ -0.56
ZEB1-223	ENST00000561304	PIK3C2B	O00750	1634 aa		11.54	□□□□□ -0.56
ZEB1-223	ENST00000561304	MYO5B	Q9ULV0	1848 aa		11.54	□□□□□ -0.56
ZEB1-223	ENST00000561304	STRCP1	A6NGW2	1772 aa		11.54	□□□□□ -0.56
ZEB1-223	ENST00000561304	FXR2	P51116	673 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
ZEB1-223	ENST00000561304	SYNM	O15061	1565 aa		11.52	□□□□□ -0.56
ZEB1-223	ENST00000561304	ANKRD30A	Q9BXX3	1397 aa		11.52	□□□□□ -0.56
ZEB1-223	ENST00000561304	EFCAB6	Q5THR3	1501 aa		11.52	□□□□□ -0.57
ZEB1-223	ENST00000561304	LMTK2	Q8IWU2	1503 aa		11.52	□□□□□ -0.57
ZEB1-223	ENST00000561304	UNC13B	O14795	1591 aa		11.52	□□□□□ -0.57
ZEB1-223	ENST00000561304	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
ZEB1-223	ENST00000561304	GCC2	Q8IWJ2	1684 aa		11.51	□□□□□ -0.57
ZEB1-223	ENST00000561304	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.51	□□□□□ -0.57
ZEB1-223	ENST00000561304	FAM50A	Q14320	339 aa	Known RBP	11.51	□□□□□ -0.57
ZEB1-223	ENST00000561304	ARHGAP31	Q2M1Z3	1444 aa		11.51	□□□□□ -0.57
ZEB1-223	ENST00000561304	PRR29	P0C7W0	189 aa		11.5	□□□□□ -0.57
ZEB1-223	ENST00000561304	PKD2	Q13563	968 aa		11.5	□□□□□ -0.57
ZEB1-223	ENST00000561304	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.5	□□□□□ -0.57
ZEB1-223	ENST00000561304	TET3	O43151	1660 aa		11.5	□□□□□ -0.57
ZEB1-223	ENST00000561304	KDM5A	P29375	1690 aa	Known RBP	11.49	□□□□□ -0.57
ZEB1-223	ENST00000561304	IQSEC2	Q5JU85	1478 aa		11.49	□□□□□ -0.57
ZEB1-223	ENST00000561304		E9PCH4	1651 aa		11.48	□□□□□ -0.57
ZEB1-223	ENST00000561304	MED14	O60244	1454 aa		11.48	□□□□□ -0.57
ZEB1-223	ENST00000561304	IQGAP3	Q86VI3	1631 aa		11.47	□□□□□ -0.57
ZEB1-223	ENST00000561304	ANKRD50	Q9ULJ7	1429 aa		11.47	□□□□□ -0.57
ZEB1-223	ENST00000561304	ARHGAP23	Q9P227	1491 aa		11.46	□□□□□ -0.57
ZEB1-223	ENST00000561304	XIRP1	Q702N8	1843 aa	Known RBP	11.46	□□□□□ -0.57
ZEB1-223	ENST00000561304	SLIT1	O75093	1534 aa		11.46	□□□□□ -0.58
ZEB1-223	ENST00000561304	NPHP4	O75161	1426 aa	Predicted RBP	11.46	□□□□□ -0.58
ZEB1-223	ENST00000561304	LHX8	Q68G74	356 aa		11.45	□□□□□ -0.58
ZEB1-223	ENST00000561304	KANK1	Q14678	1352 aa		11.44	□□□□□ -0.58
ZEB1-223	ENST00000561304	ADGRB3	O60242	1522 aa		11.44	□□□□□ -0.58
ZEB1-223	ENST00000561304	PLSCR2	Q9NRY7	297 aa		11.44	□□□□□ -0.58
ZEB1-223	ENST00000561304	NOS1	P29475	1434 aa		11.44	□□□□□ -0.58
ZEB1-223	ENST00000561304	CPS1	P31327	1500 aa		11.44	□□□□□ -0.58
ZEB1-223	ENST00000561304	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.43	□□□□□ -0.58
ZEB1-223	ENST00000561304	SCAF11	Q99590	1463 aa	Known RBP	11.43	□□□□□ -0.58
ZEB1-223	ENST00000561304	ALK	Q9UM73	1620 aa		11.43	□□□□□ -0.58
ZEB1-223	ENST00000561304	ROCK1	Q13464	1354 aa		11.43	□□□□□ -0.58
ZEB1-223	ENST00000561304	ANKLE2	Q86XL3	938 aa		11.42	□□□□□ -0.58
ZEB1-223	ENST00000561304	RPRD2	Q5VT52	1461 aa	Known RBP	11.41	□□□□□ -0.58
ZEB1-223	ENST00000561304	TMEM131L	A2VDJ0	1609 aa		11.41	□□□□□ -0.58
ZEB1-223	ENST00000561304	SPHKAP	Q2M3C7	1700 aa		11.4	□□□□□ -0.58
ZEB1-223	ENST00000561304	RRBP1	Q9P2E9	1410 aa	Known RBP	11.4	□□□□□ -0.58
ZEB1-223	ENST00000561304	LTK	P29376	864 aa		11.4	□□□□□ -0.59
ZEB1-223	ENST00000561304	PRKAR2A	P13861	404 aa	Known RBP	11.39	□□□□□ -0.59
ZEB1-223	ENST00000561304	ITGAE	P38570	1179 aa		11.39	□□□□□ -0.59
ZEB1-223	ENST00000561304	IDI1	Q13907	227 aa		11.38	□□□□□ -0.59
ZEB1-223	ENST00000561304	TMEM2	Q9UHN6	1383 aa		11.38	□□□□□ -0.59
ZEB1-223	ENST00000561304	LRRC7	Q96NW7	1537 aa		11.37	□□□□□ -0.59
ZEB1-223	ENST00000561304	UBAP1L	F5GYI3	381 aa		11.35	□□□□□ -0.59
ZEB1-223	ENST00000561304	CHD2	O14647	1828 aa	Known RBP	11.35	□□□□□ -0.59
ZEB1-223	ENST00000561304	ZFYVE9	O95405	1425 aa		11.35	□□□□□ -0.59
ZEB1-223	ENST00000561304	TXNDC2	Q86VQ3	553 aa		11.35	□□□□□ -0.59
ZEB1-223	ENST00000561304	NWD1	Q149M9	1564 aa		11.34	□□□□□ -0.59
ZEB1-223	ENST00000561304	CLTCL1	P53675	1640 aa		11.33	□□□□□ -0.6
ZEB1-223	ENST00000561304	NAIP	Q13075	1403 aa		11.32	□□□□□ -0.6
ZEB1-223	ENST00000561304	NUP155	O75694	1391 aa		11.32	□□□□□ -0.6
ZEB1-223	ENST00000561304	FBXO3	Q9UK99	471 aa		11.32	□□□□□ -0.6
ZEB1-223	ENST00000561304	KIF1B	O60333	1816 aa		11.31	□□□□□ -0.6
ZEB1-223	ENST00000561304	NRXN3	Q9Y4C0	1643 aa		11.31	□□□□□ -0.6
ZEB1-223	ENST00000561304	CHADL	Q6NUI6	762 aa		11.3	□□□□□ -0.6
ZEB1-223	ENST00000561304	SLC52A1	Q9NWF4	448 aa		11.3	□□□□□ -0.6
ZEB1-223	ENST00000561304	EID1	Q9Y6B2	187 aa		11.3	□□□□□ -0.6
ZEB1-223	ENST00000561304	RIMS2	Q9UQ26	1411 aa		11.3	□□□□□ -0.6
ZEB1-223	ENST00000561304	CREBZF	Q9NS37	354 aa		11.29	□□□□□ -0.6
ZEB1-223	ENST00000561304	PIP4K2B	P78356	416 aa		11.28	□□□□□ -0.6
ZEB1-223	ENST00000561304	TRPM2	O94759	1503 aa		11.28	□□□□□ -0.6
ZEB1-223	ENST00000561304	SLC26A8	Q96RN1	970 aa		11.28	□□□□□ -0.6
ZEB1-223	ENST00000561304	HFM1	A2PYH4	1435 aa		11.28	□□□□□ -0.6
ZEB1-223	ENST00000561304	PLEKHG1	Q9ULL1	1385 aa		11.27	□□□□□ -0.6
ZEB1-223	ENST00000561304	DIP2A	Q14689	1571 aa		11.27	□□□□□ -0.61
ZEB1-223	ENST00000561304	NKTR	P30414	1462 aa	Known RBP	11.26	□□□□□ -0.61
ZEB1-223	ENST00000561304	MED1	Q15648	1581 aa	Predicted RBP	11.26	□□□□□ -0.61
ZEB1-223	ENST00000561304	ADAMTS13	Q76LX8	1427 aa		11.26	□□□□□ -0.61
ZEB1-223	ENST00000561304	HSPA1L	P34931	641 aa		11.26	□□□□□ -0.61
ZEB1-223	ENST00000561304	DISP3	Q9P2K9	1392 aa		11.26	□□□□□ -0.61
ZEB1-223	ENST00000561304	SETD1A	O15047	1707 aa	Known RBP	11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	ROBO1	Q9Y6N7	1651 aa		11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	NEXMIF	Q5QGS0	1516 aa		11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	TOM1	O60784	492 aa		11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	GABBR2	O75899	941 aa		11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	XRN1	Q8IZH2	1706 aa	Known RBP	11.25	□□□□□ -0.61
ZEB1-223	ENST00000561304	PPL	O60437	1756 aa		11.24	□□□□□ -0.61
ZEB1-223	ENST00000561304	CHGA	P10645	457 aa	Known RBP	11.24	□□□□□ -0.61
ZEB1-223	ENST00000561304	RBM33	Q96EV2	1170 aa	Known RBP	11.24	□□□□□ -0.61
ZEB1-223	ENST00000561304	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.24	□□□□□ -0.61
ZEB1-223	ENST00000561304	TMEM94	Q12767	1356 aa		11.24	□□□□□ -0.61
ZEB1-223	ENST00000561304	SETBP1	Q9Y6X0	1596 aa		11.24	□□□□□ -0.61
ZEB1-223	ENST00000561304	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.23	□□□□□ -0.61
ZEB1-223	ENST00000561304	PLEKHG5	O94827	1062 aa		11.22	□□□□□ -0.61
ZEB1-223	ENST00000561304	KCNA6	P17658	529 aa		11.22	□□□□□ -0.61
ZEB1-223	ENST00000561304	ILDR2	Q71H61	639 aa		11.22	□□□□□ -0.61
ZEB1-223	ENST00000561304	IFT172	Q9UG01	1749 aa		11.22	□□□□□ -0.61
ZEB1-223	ENST00000561304	PPP1R15A	O75807	674 aa	Predicted RBP	11.21	□□□□□ -0.61
ZEB1-223	ENST00000561304	PTPRU	Q92729	1446 aa		11.21	□□□□□ -0.62
ZEB1-223	ENST00000561304	C19orf67	A6NJJ6	358 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms