RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 XIRP1Q702N8 1843 aaKnown RBP21■□□□□ 0.95
MRPS11-209ENST00000560708 ZFYVE9O95405 1425 aa21■□□□□ 0.95
MRPS11-209ENST00000560708 NUP155O75694 1391 aa20.99■□□□□ 0.95
MRPS11-209ENST00000560708 RIMS2Q9UQ26 1411 aa20.97■□□□□ 0.95
MRPS11-209ENST00000560708 BCANQ96GW7 911 aa20.97■□□□□ 0.95
MRPS11-209ENST00000560708 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
MRPS11-209ENST00000560708 MED1Q15648 1581 aaPredicted RBP20.96■□□□□ 0.95
MRPS11-209ENST00000560708 TMEM94Q12767 1356 aa20.96■□□□□ 0.95
MRPS11-209ENST00000560708 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.95
MRPS11-209ENST00000560708 NWD1Q149M9 1564 aa20.95■□□□□ 0.94
MRPS11-209ENST00000560708 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
MRPS11-209ENST00000560708 KCNA6P17658 529 aa20.94■□□□□ 0.94
MRPS11-209ENST00000560708 PLEKHG1Q9ULL1 1385 aa20.94■□□□□ 0.94
MRPS11-209ENST00000560708 NKTRP30414 1462 aaKnown RBP20.93■□□□□ 0.94
MRPS11-209ENST00000560708 RBM33Q96EV2 1170 aaKnown RBP20.92■□□□□ 0.94
MRPS11-209ENST00000560708 PROSER2Q86WR7 435 aaPredicted RBP20.9■□□□□ 0.94
MRPS11-209ENST00000560708 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.93
MRPS11-209ENST00000560708 NUTM2DQ5VT03 806 aaPredicted RBP20.89■□□□□ 0.93
MRPS11-209ENST00000560708 SOCS7O14512 581 aa20.88■□□□□ 0.93
MRPS11-209ENST00000560708 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
MRPS11-209ENST00000560708 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.87■□□□□ 0.93
MRPS11-209ENST00000560708 NAIPQ13075 1403 aa20.87■□□□□ 0.93
MRPS11-209ENST00000560708 ADAMTS13Q76LX8 1427 aa20.85■□□□□ 0.93
MRPS11-209ENST00000560708 CHD2O14647 1828 aaKnown RBP20.84■□□□□ 0.93
MRPS11-209ENST00000560708 DIP2AQ14689 1571 aa20.84■□□□□ 0.93
MRPS11-209ENST00000560708 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
MRPS11-209ENST00000560708 TBX22Q9Y458 520 aa20.82■□□□□ 0.92
MRPS11-209ENST00000560708 ROBO1Q9Y6N7 1651 aa20.82■□□□□ 0.92
MRPS11-209ENST00000560708 MSH6P52701 1360 aa20.82■□□□□ 0.92
MRPS11-209ENST00000560708 CLTCL1P53675 1640 aa20.79■□□□□ 0.92
MRPS11-209ENST00000560708 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
MRPS11-209ENST00000560708 TRPM2O94759 1503 aa20.78■□□□□ 0.92
MRPS11-209ENST00000560708 FOXD1Q16676 465 aa20.78■□□□□ 0.92
MRPS11-209ENST00000560708 PIK3R4Q99570 1358 aa20.76■□□□□ 0.91
MRPS11-209ENST00000560708 NRXN3Q9Y4C0 1643 aa20.76■□□□□ 0.91
MRPS11-209ENST00000560708 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
MRPS11-209ENST00000560708 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
MRPS11-209ENST00000560708 SETBP1Q9Y6X0 1596 aa20.74■□□□□ 0.91
MRPS11-209ENST00000560708 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
MRPS11-209ENST00000560708 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
MRPS11-209ENST00000560708 NCOA3Q9Y6Q9 1424 aa20.72■□□□□ 0.91
MRPS11-209ENST00000560708 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
MRPS11-209ENST00000560708 NEXMIFQ5QGS0 1516 aa20.72■□□□□ 0.91
MRPS11-209ENST00000560708 AMOTL2Q9Y2J4 779 aa20.7■□□□□ 0.9
MRPS11-209ENST00000560708 XRN1Q8IZH2 1706 aaKnown RBP20.7■□□□□ 0.9
MRPS11-209ENST00000560708 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
MRPS11-209ENST00000560708 KIF1BO60333 1816 aa20.69■□□□□ 0.9
MRPS11-209ENST00000560708 PHLPP1O60346 1717 aa20.68■□□□□ 0.9
MRPS11-209ENST00000560708 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
MRPS11-209ENST00000560708 METP08581 1390 aa20.66■□□□□ 0.9
MRPS11-209ENST00000560708 C19orf44Q9H6X5 657 aa20.65■□□□□ 0.9
MRPS11-209ENST00000560708 ATF3P18847 181 aa20.64■□□□□ 0.89
MRPS11-209ENST00000560708 CADPS2Q86UW7 1296 aa20.64■□□□□ 0.89
MRPS11-209ENST00000560708 COL16A1Q07092 1604 aaPredicted RBP20.64■□□□□ 0.89
MRPS11-209ENST00000560708 RGS17Q9UGC6 210 aaPredicted RBP20.61■□□□□ 0.89
MRPS11-209ENST00000560708 DCCP43146 1447 aa20.6■□□□□ 0.89
MRPS11-209ENST00000560708 JCADQ9P266 1359 aa20.59■□□□□ 0.89
MRPS11-209ENST00000560708 AHDC1Q5TGY3 1603 aaPredicted RBP20.59■□□□□ 0.89
MRPS11-209ENST00000560708 SETD1AO15047 1707 aaKnown RBP20.57■□□□□ 0.88
MRPS11-209ENST00000560708 NALCNQ8IZF0 1738 aa20.56■□□□□ 0.88
MRPS11-209ENST00000560708 ADGRL3Q9HAR2 1447 aa20.56■□□□□ 0.88
MRPS11-209ENST00000560708 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
MRPS11-209ENST00000560708 MST1RQ04912 1400 aa20.55■□□□□ 0.88
MRPS11-209ENST00000560708 PPLO60437 1756 aa20.55■□□□□ 0.88
MRPS11-209ENST00000560708 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
MRPS11-209ENST00000560708 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
MRPS11-209ENST00000560708 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
MRPS11-209ENST00000560708 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
MRPS11-209ENST00000560708 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
MRPS11-209ENST00000560708 LRP6O75581 1613 aa20.52■□□□□ 0.88
MRPS11-209ENST00000560708 POTEAQ6S8J7 498 aa20.51■□□□□ 0.87
MRPS11-209ENST00000560708 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
MRPS11-209ENST00000560708 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
MRPS11-209ENST00000560708 SHPRHQ149N8 1683 aa20.5■□□□□ 0.87
MRPS11-209ENST00000560708 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
MRPS11-209ENST00000560708 NHSL1Q5SYE7 1610 aa20.48■□□□□ 0.87
MRPS11-209ENST00000560708 SPATA31A6Q5VVP1 1343 aa20.48■□□□□ 0.87
MRPS11-209ENST00000560708 PRAG1Q86YV5 1406 aa20.47■□□□□ 0.87
MRPS11-209ENST00000560708 RGL3Q3MIN7 710 aa20.47■□□□□ 0.87
MRPS11-209ENST00000560708 ADGRF5Q8IZF2 1346 aa20.46■□□□□ 0.87
MRPS11-209ENST00000560708 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
MRPS11-209ENST00000560708 IFT172Q9UG01 1749 aa20.45■□□□□ 0.86
MRPS11-209ENST00000560708 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
MRPS11-209ENST00000560708 DDX17Q92841 729 aaKnown RBP20.44■□□□□ 0.86
MRPS11-209ENST00000560708 C1orf167Q5SNV9 1468 aa20.43■□□□□ 0.86
MRPS11-209ENST00000560708 ANKRD30BQ9BXX2 1392 aa20.42■□□□□ 0.86
MRPS11-209ENST00000560708 NUTM2BA6NNL0 878 aaPredicted RBP20.4■□□□□ 0.86
MRPS11-209ENST00000560708 NUTM2EB1AL46 878 aaPredicted RBP20.4■□□□□ 0.86
MRPS11-209ENST00000560708 NUTM2AQ8IVF1 878 aaPredicted RBP20.4■□□□□ 0.86
MRPS11-209ENST00000560708 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
MRPS11-209ENST00000560708 PIK3C2GO75747 1445 aa20.39■□□□□ 0.85
MRPS11-209ENST00000560708 LRRC59Q96AG4 307 aaKnown RBP20.37■□□□□ 0.85
MRPS11-209ENST00000560708 ORAI2Q96SN7 254 aa20.37■□□□□ 0.85
MRPS11-209ENST00000560708 STK26Q9P289 416 aa20.37■□□□□ 0.85
MRPS11-209ENST00000560708 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
MRPS11-209ENST00000560708 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
MRPS11-209ENST00000560708 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
MRPS11-209ENST00000560708 TECPR2O15040 1411 aa20.36■□□□□ 0.85
MRPS11-209ENST00000560708 LAMC1P11047 1609 aa20.35■□□□□ 0.85
MRPS11-209ENST00000560708 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms