RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MLH3Q9UHC1 1453 aa13.32□□□□□ -0.28
RTF1-206ENST00000560447 KIF1BO60333 1816 aa13.32□□□□□ -0.28
RTF1-206ENST00000560447 NEO1Q92859 1461 aa13.31□□□□□ -0.28
RTF1-206ENST00000560447 COL17A1Q9UMD9 1497 aaPredicted RBP13.31□□□□□ -0.28
RTF1-206ENST00000560447 EFCAB6Q5THR3 1501 aa13.31□□□□□ -0.28
RTF1-206ENST00000560447 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
RTF1-206ENST00000560447 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
RTF1-206ENST00000560447 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
RTF1-206ENST00000560447 NEFLP07196 543 aa13.3□□□□□ -0.28
RTF1-206ENST00000560447 WASHC2CQ9Y4E1 1318 aa13.3□□□□□ -0.28
RTF1-206ENST00000560447 IFT172Q9UG01 1749 aa13.29□□□□□ -0.28
RTF1-206ENST00000560447 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
RTF1-206ENST00000560447 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
RTF1-206ENST00000560447 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
RTF1-206ENST00000560447 MYOM2P54296 1465 aa13.28□□□□□ -0.28
RTF1-206ENST00000560447 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
RTF1-206ENST00000560447 HNRNPUQ00839 825 aaKnown RBP eCLIP13.27□□□□□ -0.29
RTF1-206ENST00000560447 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
RTF1-206ENST00000560447 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
RTF1-206ENST00000560447 CD109Q6YHK3 1445 aa13.27□□□□□ -0.29
RTF1-206ENST00000560447 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
RTF1-206ENST00000560447 GLI2P10070 1586 aa13.26□□□□□ -0.29
RTF1-206ENST00000560447 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
RTF1-206ENST00000560447 RALBP1Q15311 655 aa13.26□□□□□ -0.29
RTF1-206ENST00000560447 ZMYM4Q5VZL5 1548 aa13.26□□□□□ -0.29
RTF1-206ENST00000560447 MRS2Q9HD23 443 aa13.26□□□□□ -0.29
RTF1-206ENST00000560447 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
RTF1-206ENST00000560447 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
RTF1-206ENST00000560447 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
RTF1-206ENST00000560447 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
RTF1-206ENST00000560447 INSRP06213 1382 aa13.24□□□□□ -0.29
RTF1-206ENST00000560447 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
RTF1-206ENST00000560447 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
RTF1-206ENST00000560447 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
RTF1-206ENST00000560447 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
RTF1-206ENST00000560447 SYNMO15061 1565 aa13.21□□□□□ -0.29
RTF1-206ENST00000560447 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
RTF1-206ENST00000560447 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
RTF1-206ENST00000560447 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
RTF1-206ENST00000560447 RICTORQ6R327 1708 aa13.21□□□□□ -0.3
RTF1-206ENST00000560447 NRXN1Q9ULB1 1477 aa13.21□□□□□ -0.3
RTF1-206ENST00000560447 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.3
RTF1-206ENST00000560447 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
RTF1-206ENST00000560447 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
RTF1-206ENST00000560447 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
RTF1-206ENST00000560447 KIF3BO15066 747 aa13.2□□□□□ -0.3
RTF1-206ENST00000560447 TMF1P82094 1093 aa13.2□□□□□ -0.3
RTF1-206ENST00000560447 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
RTF1-206ENST00000560447 PARD3Q8TEW0 1356 aa13.2□□□□□ -0.3
RTF1-206ENST00000560447 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
RTF1-206ENST00000560447 TESK2Q96S53 571 aa13.19□□□□□ -0.3
RTF1-206ENST00000560447 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
RTF1-206ENST00000560447 HAX1O00165 279 aa13.18□□□□□ -0.3
RTF1-206ENST00000560447 FKBP8Q14318 412 aa13.18□□□□□ -0.3
RTF1-206ENST00000560447 PPLO60437 1756 aa13.17□□□□□ -0.3
RTF1-206ENST00000560447 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
RTF1-206ENST00000560447 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
RTF1-206ENST00000560447 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
RTF1-206ENST00000560447 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
RTF1-206ENST00000560447 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
RTF1-206ENST00000560447 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
RTF1-206ENST00000560447 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
RTF1-206ENST00000560447 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
RTF1-206ENST00000560447 ABCC3O15438 1527 aa13.16□□□□□ -0.3
RTF1-206ENST00000560447 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
RTF1-206ENST00000560447 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
RTF1-206ENST00000560447 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
RTF1-206ENST00000560447 SBNO2Q9Y2G9 1366 aa13.15□□□□□ -0.3
RTF1-206ENST00000560447 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
RTF1-206ENST00000560447 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 DISP3Q9P2K9 1392 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 NPC1L1Q9UHC9 1359 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
RTF1-206ENST00000560447 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
RTF1-206ENST00000560447 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
RTF1-206ENST00000560447 EVX2Q03828 476 aa13.13□□□□□ -0.31
RTF1-206ENST00000560447 MYOM1P52179 1685 aa13.12□□□□□ -0.31
RTF1-206ENST00000560447 NOS1P29475 1434 aa13.12□□□□□ -0.31
RTF1-206ENST00000560447 NPATQ14207 1427 aa13.12□□□□□ -0.31
RTF1-206ENST00000560447 UGGT1Q9NYU2 1555 aa13.09□□□□□ -0.31
RTF1-206ENST00000560447 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
RTF1-206ENST00000560447 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
RTF1-206ENST00000560447 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
RTF1-206ENST00000560447 ASXL1Q8IXJ9 1541 aa13.08□□□□□ -0.31
RTF1-206ENST00000560447 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
RTF1-206ENST00000560447 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
RTF1-206ENST00000560447 NUDCQ9Y266 331 aa13.08□□□□□ -0.32
RTF1-206ENST00000560447 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
RTF1-206ENST00000560447 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
RTF1-206ENST00000560447 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
RTF1-206ENST00000560447 ZFYVE9O95405 1425 aa13.06□□□□□ -0.32
RTF1-206ENST00000560447 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
RTF1-206ENST00000560447 AGLP35573 1532 aa13.06□□□□□ -0.32
RTF1-206ENST00000560447 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
RTF1-206ENST00000560447 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
RTF1-206ENST00000560447 PROM2Q8N271 834 aa13.05□□□□□ -0.32
RTF1-206ENST00000560447 PANK3Q9H999 370 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms