RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 PPP1R15AO75807 674 aaPredicted RBP31.31■■■□□ 2.6
ETFA-213ENST00000560309 ZFYVE9O95405 1425 aa31.31■■■□□ 2.6
ETFA-213ENST00000560309 TMEM131LA2VDJ0 1609 aa31.31■■■□□ 2.6
ETFA-213ENST00000560309 RIMS2Q9UQ26 1411 aa31.3■■■□□ 2.6
ETFA-213ENST00000560309 PLEKHG1Q9ULL1 1385 aa31.3■■■□□ 2.6
ETFA-213ENST00000560309 ALKQ9UM73 1620 aa31.28■■■□□ 2.6
ETFA-213ENST00000560309 CHGAP10645 457 aaKnown RBP31.28■■■□□ 2.6
ETFA-213ENST00000560309 PROSER2Q86WR7 435 aaPredicted RBP31.25■■■□□ 2.59
ETFA-213ENST00000560309 TBX22Q9Y458 520 aa31.25■■■□□ 2.59
ETFA-213ENST00000560309 MYO5BQ9ULV0 1848 aa31.24■■■□□ 2.59
ETFA-213ENST00000560309 NKTRP30414 1462 aaKnown RBP31.22■■■□□ 2.59
ETFA-213ENST00000560309 TMEM94Q12767 1356 aa31.22■■■□□ 2.59
ETFA-213ENST00000560309 XIRP1Q702N8 1843 aaKnown RBP31.21■■■□□ 2.59
ETFA-213ENST00000560309 ILDR2Q71H61 639 aa31.2■■■□□ 2.59
ETFA-213ENST00000560309 NWD1Q149M9 1564 aa31.18■■■□□ 2.58
ETFA-213ENST00000560309 NAIPQ13075 1403 aa31.15■■■□□ 2.58
ETFA-213ENST00000560309 FAM135BQ49AJ0 1406 aa31.15■■■□□ 2.58
ETFA-213ENST00000560309 PIK3R4Q99570 1358 aa31.15■■■□□ 2.58
ETFA-213ENST00000560309 CHD2O14647 1828 aaKnown RBP31.13■■■□□ 2.57
ETFA-213ENST00000560309 SOCS7O14512 581 aa31.13■■■□□ 2.57
ETFA-213ENST00000560309 NCOA3Q9Y6Q9 1424 aa31.12■■■□□ 2.57
ETFA-213ENST00000560309 MSH6P52701 1360 aa31.11■■■□□ 2.57
ETFA-213ENST00000560309 DIP2AQ14689 1571 aa31.11■■■□□ 2.57
ETFA-213ENST00000560309 SPHKAPQ2M3C7 1700 aa31.1■■■□□ 2.57
ETFA-213ENST00000560309 HFM1A2PYH4 1435 aa31.09■■■□□ 2.57
ETFA-213ENST00000560309 ADAMTS13Q76LX8 1427 aa31.07■■■□□ 2.57
ETFA-213ENST00000560309 NUTM2DQ5VT03 806 aaPredicted RBP31.07■■■□□ 2.56
ETFA-213ENST00000560309 MED1Q15648 1581 aaPredicted RBP31.05■■■□□ 2.56
ETFA-213ENST00000560309 ZNF326Q5BKZ1 582 aaKnown RBP31.05■■■□□ 2.56
ETFA-213ENST00000560309 SENP3Q9H4L4 574 aaPredicted RBP31.05■■■□□ 2.56
ETFA-213ENST00000560309 TRIM52Q96A61 297 aa31.04■■■□□ 2.56
ETFA-213ENST00000560309 RBM33Q96EV2 1170 aaKnown RBP31.03■■■□□ 2.56
ETFA-213ENST00000560309 SLAIN2Q9P270 581 aa31.01■■■□□ 2.55
ETFA-213ENST00000560309 TRPM2O94759 1503 aa31■■■□□ 2.55
ETFA-213ENST00000560309 PHF23Q9BUL5 403 aaPredicted RBP30.98■■■□□ 2.55
ETFA-213ENST00000560309 SLC4A1APQ9BWU0 796 aaKnown RBP30.97■■■□□ 2.55
ETFA-213ENST00000560309 C19orf44Q9H6X5 657 aa30.97■■■□□ 2.55
ETFA-213ENST00000560309 AMOTL2Q9Y2J4 779 aa30.97■■■□□ 2.55
ETFA-213ENST00000560309 C14orf37Q86TY3 774 aa30.96■■■□□ 2.55
ETFA-213ENST00000560309 ACIN1Q9UKV3 1341 aaKnown RBP30.96■■■□□ 2.55
ETFA-213ENST00000560309 CADPS2Q86UW7 1296 aa30.95■■■□□ 2.55
ETFA-213ENST00000560309 SETBP1Q9Y6X0 1596 aa30.94■■■□□ 2.54
ETFA-213ENST00000560309 KIF1BO60333 1816 aa30.94■■■□□ 2.54
ETFA-213ENST00000560309 ROBO1Q9Y6N7 1651 aa30.93■■■□□ 2.54
ETFA-213ENST00000560309 CLTCL1P53675 1640 aa30.91■■■□□ 2.54
ETFA-213ENST00000560309 RPGRIP1LQ68CZ1 1315 aa30.91■■■□□ 2.54
ETFA-213ENST00000560309 VGFO15240 615 aaPredicted RBP30.9■■■□□ 2.54
ETFA-213ENST00000560309 ATF3P18847 181 aa30.9■■■□□ 2.54
ETFA-213ENST00000560309 PTPRUQ92729 1446 aa30.86■■■□□ 2.53
ETFA-213ENST00000560309 NEXMIFQ5QGS0 1516 aa30.86■■■□□ 2.53
ETFA-213ENST00000560309 NRXN3Q9Y4C0 1643 aa30.85■■■□□ 2.53
ETFA-213ENST00000560309 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.81■■■□□ 2.52
ETFA-213ENST00000560309 DCCP43146 1447 aa30.81■■■□□ 2.52
ETFA-213ENST00000560309 METP08581 1390 aa30.79■■■□□ 2.52
ETFA-213ENST00000560309 XRN1Q8IZH2 1706 aaKnown RBP30.78■■■□□ 2.52
ETFA-213ENST00000560309 JCADQ9P266 1359 aa30.77■■■□□ 2.52
ETFA-213ENST00000560309 MPHOSPH9Q99550 1183 aa30.76■■■□□ 2.51
ETFA-213ENST00000560309 PHLPP1O60346 1717 aa30.76■■■□□ 2.51
ETFA-213ENST00000560309 CCDC144AA2RUR9 1427 aa30.72■■■□□ 2.51
ETFA-213ENST00000560309 AHDC1Q5TGY3 1603 aaPredicted RBP30.67■■■□□ 2.5
ETFA-213ENST00000560309 FOXD1Q16676 465 aa30.67■■■□□ 2.5
ETFA-213ENST00000560309 BRINP3Q76B58 766 aa30.67■■■□□ 2.5
ETFA-213ENST00000560309 RGS17Q9UGC6 210 aaPredicted RBP30.67■■■□□ 2.5
ETFA-213ENST00000560309 ADGRL3Q9HAR2 1447 aa30.66■■■□□ 2.5
ETFA-213ENST00000560309 SPATA31A6Q5VVP1 1343 aa30.66■■■□□ 2.5
ETFA-213ENST00000560309 SETD5Q9C0A6 1442 aa30.65■■■□□ 2.5
ETFA-213ENST00000560309 PPLO60437 1756 aa30.65■■■□□ 2.5
ETFA-213ENST00000560309 COL16A1Q07092 1604 aaPredicted RBP30.65■■■□□ 2.5
ETFA-213ENST00000560309 PTCH1Q13635 1447 aa30.64■■■□□ 2.5
ETFA-213ENST00000560309 ANKRD30BQ9BXX2 1392 aa30.63■■■□□ 2.49
ETFA-213ENST00000560309 PRAG1Q86YV5 1406 aa30.63■■■□□ 2.49
ETFA-213ENST00000560309 MST1RQ04912 1400 aa30.62■■■□□ 2.49
ETFA-213ENST00000560309 SETD1AO15047 1707 aaKnown RBP30.59■■■□□ 2.49
ETFA-213ENST00000560309 SPATA31E1Q6ZUB1 1445 aa30.59■■■□□ 2.49
ETFA-213ENST00000560309 RGL3Q3MIN7 710 aa30.58■■■□□ 2.49
ETFA-213ENST00000560309 ASXL1Q8IXJ9 1541 aa30.56■■■□□ 2.48
ETFA-213ENST00000560309 LRRC59Q96AG4 307 aaKnown RBP30.55■■■□□ 2.48
ETFA-213ENST00000560309 ROBO2Q9HCK4 1378 aa30.54■■■□□ 2.48
ETFA-213ENST00000560309 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
ETFA-213ENST00000560309 SHPRHQ149N8 1683 aa30.52■■■□□ 2.48
ETFA-213ENST00000560309 NALCNQ8IZF0 1738 aa30.51■■■□□ 2.47
ETFA-213ENST00000560309 POTEAQ6S8J7 498 aa30.51■■■□□ 2.47
ETFA-213ENST00000560309 MEX3CQ5U5Q3 659 aaKnown RBP30.5■■■□□ 2.47
ETFA-213ENST00000560309 HRCP23327 699 aa30.48■■■□□ 2.47
ETFA-213ENST00000560309 RAB3GAP2Q9H2M9 1393 aa30.48■■■□□ 2.47
ETFA-213ENST00000560309 C1orf167Q5SNV9 1468 aa30.48■■■□□ 2.47
ETFA-213ENST00000560309 NHSL1Q5SYE7 1610 aa30.47■■■□□ 2.47
ETFA-213ENST00000560309 ZNF772Q68DY9 489 aaPredicted RBP30.47■■■□□ 2.47
ETFA-213ENST00000560309 IFT172Q9UG01 1749 aa30.46■■■□□ 2.47
ETFA-213ENST00000560309 LRPPRCP42704 1394 aaKnown RBP30.44■■■□□ 2.46
ETFA-213ENST00000560309 ABCC11Q96J66 1382 aa30.44■■■□□ 2.46
ETFA-213ENST00000560309 TECPR2O15040 1411 aa30.44■■■□□ 2.46
ETFA-213ENST00000560309 PIK3C2GO75747 1445 aa30.43■■■□□ 2.46
ETFA-213ENST00000560309 SIRT1Q96EB6 747 aa30.42■■■□□ 2.46
ETFA-213ENST00000560309 LRP6O75581 1613 aa30.41■■■□□ 2.46
ETFA-213ENST00000560309 C14orf93Q9H972 538 aaKnown RBP30.4■■■□□ 2.46
ETFA-213ENST00000560309 STK26Q9P289 416 aa30.39■■■□□ 2.46
ETFA-213ENST00000560309 LAMC1P11047 1609 aa30.37■■■□□ 2.45
ETFA-213ENST00000560309 NUTM2BA6NNL0 878 aaPredicted RBP30.37■■■□□ 2.45
ETFA-213ENST00000560309 NUTM2EB1AL46 878 aaPredicted RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms