RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PZPP20742 1482 aa24.63■■□□□ 1.53
SEMA4B-215ENST00000560089 PKD2Q13563 968 aa24.62■■□□□ 1.53
SEMA4B-215ENST00000560089 KIAA1211Q6ZU35 1233 aa24.62■■□□□ 1.53
SEMA4B-215ENST00000560089 MYH16Q9H6N6 1097 aa24.62■■□□□ 1.53
SEMA4B-215ENST00000560089 CRBNQ96SW2 442 aa24.62■■□□□ 1.53
SEMA4B-215ENST00000560089 GZF1Q9H116 711 aaPredicted RBP24.62■■□□□ 1.53
SEMA4B-215ENST00000560089 FAM69CQ0P6D2 419 aa24.61■■□□□ 1.53
SEMA4B-215ENST00000560089 MRE11P49959 708 aa24.6■■□□□ 1.53
SEMA4B-215ENST00000560089 TMC1Q8TDI8 760 aa24.6■■□□□ 1.53
SEMA4B-215ENST00000560089 PLIN1O60240 522 aa24.59■■□□□ 1.53
SEMA4B-215ENST00000560089 TRIM44Q96DX7 344 aaPredicted RBP24.58■■□□□ 1.53
SEMA4B-215ENST00000560089 SMAP1Q8IYB5 467 aaPredicted RBP24.58■■□□□ 1.53
SEMA4B-215ENST00000560089 ARAP3Q8WWN8 1544 aa24.58■■□□□ 1.52
SEMA4B-215ENST00000560089 MAP7D2Q96T17 732 aa24.57■■□□□ 1.52
SEMA4B-215ENST00000560089 RAPGEF3O95398 923 aa24.56■■□□□ 1.52
SEMA4B-215ENST00000560089 BECN1Q14457 450 aa24.56■■□□□ 1.52
SEMA4B-215ENST00000560089 ZHX1Q9UKY1 873 aaPredicted RBP24.56■■□□□ 1.52
SEMA4B-215ENST00000560089 KDM2BQ8NHM5 1336 aa24.55■■□□□ 1.52
SEMA4B-215ENST00000560089 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
SEMA4B-215ENST00000560089 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
SEMA4B-215ENST00000560089 CENPQQ7L2Z9 268 aaPredicted RBP24.53■■□□□ 1.52
SEMA4B-215ENST00000560089 NAP1L2Q9ULW6 460 aaPredicted RBP24.53■■□□□ 1.52
SEMA4B-215ENST00000560089 ANKRD30BQ9BXX2 1392 aa24.52■■□□□ 1.52
SEMA4B-215ENST00000560089 GTF2E1P29083 439 aaPredicted RBP24.52■■□□□ 1.52
SEMA4B-215ENST00000560089 GRPEL1Q9HAV7 217 aa24.5■■□□□ 1.51
SEMA4B-215ENST00000560089 FAM13BQ9NYF5 915 aa24.5■■□□□ 1.51
SEMA4B-215ENST00000560089 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
SEMA4B-215ENST00000560089 CANXP27824 592 aaKnown RBP24.49■■□□□ 1.51
SEMA4B-215ENST00000560089 RIPK4P57078 832 aa24.48■■□□□ 1.51
SEMA4B-215ENST00000560089 PLXNC1O60486 1568 aa24.48■■□□□ 1.51
SEMA4B-215ENST00000560089 POLR1AO95602 1720 aaPredicted RBP24.48■■□□□ 1.51
SEMA4B-215ENST00000560089 TAF7LQ5H9L4 462 aa24.47■■□□□ 1.51
SEMA4B-215ENST00000560089 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
SEMA4B-215ENST00000560089 ANTXR1Q9H6X2 564 aa24.47■■□□□ 1.51
SEMA4B-215ENST00000560089 PDE3BQ13370 1112 aa24.46■■□□□ 1.51
SEMA4B-215ENST00000560089 TSPOAP1O95153 1857 aa24.46■■□□□ 1.51
SEMA4B-215ENST00000560089 ATP7AQ04656 1500 aa24.46■■□□□ 1.51
SEMA4B-215ENST00000560089 DUOX2Q9NRD8 1548 aa24.46■■□□□ 1.51
SEMA4B-215ENST00000560089 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
SEMA4B-215ENST00000560089 KIF3BO15066 747 aa24.44■■□□□ 1.5
SEMA4B-215ENST00000560089 STAC3Q96MF2 364 aa24.44■■□□□ 1.5
SEMA4B-215ENST00000560089 POLR3GLQ9BT43 218 aa24.44■■□□□ 1.5
SEMA4B-215ENST00000560089 CHMP4BQ9H444 224 aaKnown RBP24.44■■□□□ 1.5
SEMA4B-215ENST00000560089 MCM4P33991 863 aa24.44■■□□□ 1.5
SEMA4B-215ENST00000560089 NCLP19338 710 aaKnown RBP24.43■■□□□ 1.5
SEMA4B-215ENST00000560089 PRDM10Q9NQV6 1147 aa24.43■■□□□ 1.5
SEMA4B-215ENST00000560089 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
SEMA4B-215ENST00000560089 USP19O94966 1318 aa24.41■■□□□ 1.5
SEMA4B-215ENST00000560089 TRAK2O60296 914 aa24.41■■□□□ 1.5
SEMA4B-215ENST00000560089 RTEL1-TNFRSF6BF6WH68 1400 aa24.41■■□□□ 1.5
SEMA4B-215ENST00000560089 ZNF518AQ6AHZ1 1483 aa24.41■■□□□ 1.5
SEMA4B-215ENST00000560089 DIP2BQ9P265 1576 aa24.4■■□□□ 1.5
SEMA4B-215ENST00000560089 ARID3AQ99856 593 aa24.4■■□□□ 1.5
SEMA4B-215ENST00000560089 INO80Q9ULG1 1556 aaPredicted RBP24.4■■□□□ 1.5
SEMA4B-215ENST00000560089 POGZQ7Z3K3 1410 aa24.39■■□□□ 1.5
SEMA4B-215ENST00000560089 MAP3K4Q9Y6R4 1608 aa24.39■■□□□ 1.5
SEMA4B-215ENST00000560089 OFD1O75665 1012 aa24.39■■□□□ 1.49
SEMA4B-215ENST00000560089 CDCA7LQ96GN5 454 aa24.39■■□□□ 1.49
SEMA4B-215ENST00000560089 ERBINQ96RT1 1412 aa24.39■■□□□ 1.49
SEMA4B-215ENST00000560089 TERF1P54274 439 aa24.39■■□□□ 1.49
SEMA4B-215ENST00000560089 C20orf194Q5TEA3 1177 aa24.38■■□□□ 1.49
SEMA4B-215ENST00000560089 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.38■■□□□ 1.49
SEMA4B-215ENST00000560089 SPATA31E1Q6ZUB1 1445 aa24.37■■□□□ 1.49
SEMA4B-215ENST00000560089 ZNF326Q5BKZ1 582 aaKnown RBP24.37■■□□□ 1.49
SEMA4B-215ENST00000560089 UTP14CQ5TAP6 766 aaKnown RBP24.37■■□□□ 1.49
SEMA4B-215ENST00000560089 ISY1Q9ULR0 285 aaKnown RBP24.37■■□□□ 1.49
SEMA4B-215ENST00000560089 RPRD2Q5VT52 1461 aaKnown RBP24.37■■□□□ 1.49
SEMA4B-215ENST00000560089 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
SEMA4B-215ENST00000560089 DMTNQ08495 405 aa24.35■■□□□ 1.49
SEMA4B-215ENST00000560089 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
SEMA4B-215ENST00000560089 CFAP74Q9C0B2 1584 aa24.34■■□□□ 1.49
SEMA4B-215ENST00000560089 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
SEMA4B-215ENST00000560089 UNC13BO14795 1591 aa24.34■■□□□ 1.49
SEMA4B-215ENST00000560089 MTERF4Q7Z6M4 381 aaKnown RBP24.34■■□□□ 1.49
SEMA4B-215ENST00000560089 NEO1Q92859 1461 aa24.33■■□□□ 1.49
SEMA4B-215ENST00000560089 IPO4Q8TEX9 1081 aaKnown RBP24.32■■□□□ 1.48
SEMA4B-215ENST00000560089 GGT6Q6P531 493 aa24.32■■□□□ 1.48
SEMA4B-215ENST00000560089 BRD4O60885 1362 aaPredicted RBP24.31■■□□□ 1.48
SEMA4B-215ENST00000560089 GLI2P10070 1586 aa24.31■■□□□ 1.48
SEMA4B-215ENST00000560089 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
SEMA4B-215ENST00000560089 KDM2AQ9Y2K7 1162 aa24.3■■□□□ 1.48
SEMA4B-215ENST00000560089 R3HCC1Q9Y3T6 440 aaKnown RBP24.3■■□□□ 1.48
SEMA4B-215ENST00000560089 ZSCAN30Q86W11 494 aa24.29■■□□□ 1.48
SEMA4B-215ENST00000560089 SEC24BO95487 1268 aa24.28■■□□□ 1.48
SEMA4B-215ENST00000560089 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
SEMA4B-215ENST00000560089 TEX14Q8IWB6 1497 aa24.27■■□□□ 1.48
SEMA4B-215ENST00000560089 VIRMAQ69YN4 1812 aaKnown RBP24.27■■□□□ 1.48
SEMA4B-215ENST00000560089 MSNP26038 577 aaKnown RBP24.27■■□□□ 1.48
SEMA4B-215ENST00000560089 KDM5CP41229 1560 aa24.27■■□□□ 1.48
SEMA4B-215ENST00000560089 PPP4R3BQ5MIZ7 849 aa24.27■■□□□ 1.48
SEMA4B-215ENST00000560089 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
SEMA4B-215ENST00000560089 A2MP01023 1474 aa24.26■■□□□ 1.47
SEMA4B-215ENST00000560089 IQGAP3Q86VI3 1631 aa24.26■■□□□ 1.47
SEMA4B-215ENST00000560089 SPRYD3Q8NCJ5 442 aa24.26■■□□□ 1.47
SEMA4B-215ENST00000560089 HECW2Q9P2P5 1572 aa24.26■■□□□ 1.47
SEMA4B-215ENST00000560089 MYBBP1AQ9BQG0 1328 aaKnown RBP24.26■■□□□ 1.47
SEMA4B-215ENST00000560089 TBC1D2Q9BYX2 928 aa24.25■■□□□ 1.47
SEMA4B-215ENST00000560089 PLA2R1Q13018 1463 aa24.25■■□□□ 1.47
SEMA4B-215ENST00000560089 UQCRHLA0A096LP55 91 aa24.25■■□□□ 1.47
SEMA4B-215ENST00000560089 UQCRHP07919 91 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms