RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CHGAP10645 457 aaKnown RBP24.87■■□□□ 1.57
RPL28-209ENST00000560055 EID1Q9Y6B2 187 aa24.86■■□□□ 1.57
RPL28-209ENST00000560055 RIMS2Q9UQ26 1411 aa24.86■■□□□ 1.57
RPL28-209ENST00000560055 CCDC144AA2RUR9 1427 aa24.85■■□□□ 1.57
RPL28-209ENST00000560055 IQGAP1P46940 1657 aa24.84■■□□□ 1.57
RPL28-209ENST00000560055 ANKRD30BQ9BXX2 1392 aa24.83■■□□□ 1.57
RPL28-209ENST00000560055 KIF1BO60333 1816 aa24.82■■□□□ 1.56
RPL28-209ENST00000560055 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.79■■□□□ 1.56
RPL28-209ENST00000560055 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
RPL28-209ENST00000560055 HDGFP51858 240 aaKnown RBP24.78■■□□□ 1.56
RPL28-209ENST00000560055 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
RPL28-209ENST00000560055 PLEKHG1Q9ULL1 1385 aa24.77■■□□□ 1.56
RPL28-209ENST00000560055 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
RPL28-209ENST00000560055 ZNF326Q5BKZ1 582 aaKnown RBP24.75■■□□□ 1.55
RPL28-209ENST00000560055 PPP1R15AO75807 674 aaPredicted RBP24.73■■□□□ 1.55
RPL28-209ENST00000560055 RPGRIP1LQ68CZ1 1315 aa24.72■■□□□ 1.55
RPL28-209ENST00000560055 NUTM2DQ5VT03 806 aaPredicted RBP24.72■■□□□ 1.55
RPL28-209ENST00000560055 DHX57Q6P158 1386 aaKnown RBP24.68■■□□□ 1.54
RPL28-209ENST00000560055 ADAMTS13Q76LX8 1427 aa24.68■■□□□ 1.54
RPL28-209ENST00000560055 UBAP1LF5GYI3 381 aa24.67■■□□□ 1.54
RPL28-209ENST00000560055 SLC26A8Q96RN1 970 aa24.67■■□□□ 1.54
RPL28-209ENST00000560055 PPLO60437 1756 aa24.66■■□□□ 1.54
RPL28-209ENST00000560055 SETBP1Q9Y6X0 1596 aa24.66■■□□□ 1.54
RPL28-209ENST00000560055 RGL3Q3MIN7 710 aa24.65■■□□□ 1.54
RPL28-209ENST00000560055 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
RPL28-209ENST00000560055 NRXN3Q9Y4C0 1643 aa24.64■■□□□ 1.54
RPL28-209ENST00000560055 TBX22Q9Y458 520 aa24.64■■□□□ 1.54
RPL28-209ENST00000560055 DIP2AQ14689 1571 aa24.63■■□□□ 1.53
RPL28-209ENST00000560055 VGFO15240 615 aaPredicted RBP24.63■■□□□ 1.53
RPL28-209ENST00000560055 CPS1P31327 1500 aa24.62■■□□□ 1.53
RPL28-209ENST00000560055 IFT172Q9UG01 1749 aa24.62■■□□□ 1.53
RPL28-209ENST00000560055 BCANQ96GW7 911 aa24.62■■□□□ 1.53
RPL28-209ENST00000560055 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
RPL28-209ENST00000560055 STRCP1A6NGW2 1772 aa24.62■■□□□ 1.53
RPL28-209ENST00000560055 NWD1Q149M9 1564 aa24.58■■□□□ 1.52
RPL28-209ENST00000560055 PIK3R4Q99570 1358 aa24.57■■□□□ 1.52
RPL28-209ENST00000560055 KCNA6P17658 529 aa24.57■■□□□ 1.52
RPL28-209ENST00000560055 ADGRF5Q8IZF2 1346 aa24.57■■□□□ 1.52
RPL28-209ENST00000560055 MYOM2P54296 1465 aa24.56■■□□□ 1.52
RPL28-209ENST00000560055 NRXN1Q9ULB1 1477 aa24.55■■□□□ 1.52
RPL28-209ENST00000560055 PIK3C2GO75747 1445 aa24.53■■□□□ 1.52
RPL28-209ENST00000560055 LRRC7Q96NW7 1537 aa24.53■■□□□ 1.52
RPL28-209ENST00000560055 CHD2O14647 1828 aaKnown RBP24.53■■□□□ 1.52
RPL28-209ENST00000560055 SETD1AO15047 1707 aaKnown RBP24.52■■□□□ 1.52
RPL28-209ENST00000560055 METP08581 1390 aa24.52■■□□□ 1.52
RPL28-209ENST00000560055 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
RPL28-209ENST00000560055 ALKQ9UM73 1620 aa24.51■■□□□ 1.51
RPL28-209ENST00000560055 PTPRUQ92729 1446 aa24.51■■□□□ 1.51
RPL28-209ENST00000560055 PIP4K2BP78356 416 aa24.5■■□□□ 1.51
RPL28-209ENST00000560055 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
RPL28-209ENST00000560055 SIN3AQ96ST3 1273 aa24.48■■□□□ 1.51
RPL28-209ENST00000560055 DISP3Q9P2K9 1392 aa24.48■■□□□ 1.51
RPL28-209ENST00000560055 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
RPL28-209ENST00000560055 TOM1O60784 492 aa24.46■■□□□ 1.51
RPL28-209ENST00000560055 DCAF11Q8TEB1 546 aa24.46■■□□□ 1.51
RPL28-209ENST00000560055 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
RPL28-209ENST00000560055 AMOTL2Q9Y2J4 779 aa24.45■■□□□ 1.5
RPL28-209ENST00000560055 TMEM94Q12767 1356 aa24.43■■□□□ 1.5
RPL28-209ENST00000560055 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
RPL28-209ENST00000560055 HSPA1LP34931 641 aa24.42■■□□□ 1.5
RPL28-209ENST00000560055 C14orf93Q9H972 538 aaKnown RBP24.42■■□□□ 1.5
RPL28-209ENST00000560055 XIRP1Q702N8 1843 aaKnown RBP24.42■■□□□ 1.5
RPL28-209ENST00000560055 ASXL1Q8IXJ9 1541 aa24.41■■□□□ 1.5
RPL28-209ENST00000560055 KDM2AQ9Y2K7 1162 aa24.41■■□□□ 1.5
RPL28-209ENST00000560055 PROSER2Q86WR7 435 aaPredicted RBP24.4■■□□□ 1.5
RPL28-209ENST00000560055 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
RPL28-209ENST00000560055 ILDR2Q71H61 639 aa24.39■■□□□ 1.49
RPL28-209ENST00000560055 LAMC1P11047 1609 aa24.39■■□□□ 1.49
RPL28-209ENST00000560055 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
RPL28-209ENST00000560055 PTCH1Q13635 1447 aa24.37■■□□□ 1.49
RPL28-209ENST00000560055 NCOA3Q9Y6Q9 1424 aa24.37■■□□□ 1.49
RPL28-209ENST00000560055 CFAP70Q5T0N1 1121 aa24.37■■□□□ 1.49
RPL28-209ENST00000560055 RBM33Q96EV2 1170 aaKnown RBP24.37■■□□□ 1.49
RPL28-209ENST00000560055 LRPPRCP42704 1394 aaKnown RBP24.35■■□□□ 1.49
RPL28-209ENST00000560055 TECPR2O15040 1411 aa24.35■■□□□ 1.49
RPL28-209ENST00000560055 TMEM132EQ6IEE7 984 aa24.34■■□□□ 1.49
RPL28-209ENST00000560055 ROBO2Q9HCK4 1378 aa24.33■■□□□ 1.49
RPL28-209ENST00000560055 ADGRB1O14514 1584 aa24.33■■□□□ 1.48
RPL28-209ENST00000560055 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.48
RPL28-209ENST00000560055 ABCC11Q96J66 1382 aa24.32■■□□□ 1.48
RPL28-209ENST00000560055 YTHDC2Q9H6S0 1430 aaKnown RBP24.32■■□□□ 1.48
RPL28-209ENST00000560055 KNDC1Q76NI1 1749 aa24.29■■□□□ 1.48
RPL28-209ENST00000560055 MSH6P52701 1360 aa24.28■■□□□ 1.48
RPL28-209ENST00000560055 KIAA1210Q9ULL0 1709 aa24.27■■□□□ 1.48
RPL28-209ENST00000560055 STK26Q9P289 416 aa24.26■■□□□ 1.47
RPL28-209ENST00000560055 TONSLQ96HA7 1378 aa24.26■■□□□ 1.47
RPL28-209ENST00000560055 C19orf44Q9H6X5 657 aa24.25■■□□□ 1.47
RPL28-209ENST00000560055 ADGRL3Q9HAR2 1447 aa24.25■■□□□ 1.47
RPL28-209ENST00000560055 SIRT1Q96EB6 747 aa24.24■■□□□ 1.47
RPL28-209ENST00000560055 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
RPL28-209ENST00000560055 DCCP43146 1447 aa24.23■■□□□ 1.47
RPL28-209ENST00000560055 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.22■■□□□ 1.47
RPL28-209ENST00000560055 DLC1Q96QB1 1528 aa24.22■■□□□ 1.47
RPL28-209ENST00000560055 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
RPL28-209ENST00000560055 NALCNQ8IZF0 1738 aa24.21■■□□□ 1.47
RPL28-209ENST00000560055 MED1Q15648 1581 aaPredicted RBP24.2■■□□□ 1.47
RPL28-209ENST00000560055 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
RPL28-209ENST00000560055 NBPF1Q3BBV0 1214 aa24.19■■□□□ 1.46
RPL28-209ENST00000560055 WAPLQ7Z5K2 1190 aa24.19■■□□□ 1.46
RPL28-209ENST00000560055 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms