RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GOLGA3Q08378 1498 aa16.77■□□□□ 0.27
CSPG4P12-202ENST00000559989 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
CSPG4P12-202ENST00000559989 RABEP1Q15276 862 aa16.76■□□□□ 0.27
CSPG4P12-202ENST00000559989 PDILTQ8N807 584 aa16.76■□□□□ 0.27
CSPG4P12-202ENST00000559989 ZKSCAN1P17029 563 aaPredicted RBP16.76■□□□□ 0.27
CSPG4P12-202ENST00000559989 TRDNQ13061 729 aa16.76■□□□□ 0.27
CSPG4P12-202ENST00000559989 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSPG4P12-202ENST00000559989 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
CSPG4P12-202ENST00000559989 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
CSPG4P12-202ENST00000559989 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
CSPG4P12-202ENST00000559989 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
CSPG4P12-202ENST00000559989 ANO2Q9NQ90 1003 aa16.75■□□□□ 0.27
CSPG4P12-202ENST00000559989 GBP2P32456 591 aaPredicted RBP16.75■□□□□ 0.27
CSPG4P12-202ENST00000559989 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 SYCP1Q15431 976 aa16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 REC8O95072 547 aa16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 BRMS1Q9HCU9 246 aa16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
CSPG4P12-202ENST00000559989 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
CSPG4P12-202ENST00000559989 GIMAP7Q8NHV1 300 aa16.73■□□□□ 0.27
CSPG4P12-202ENST00000559989 PKNOX2Q96KN3 472 aa16.73■□□□□ 0.27
CSPG4P12-202ENST00000559989 DEF6Q9H4E7 631 aa16.73■□□□□ 0.27
CSPG4P12-202ENST00000559989 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
CSPG4P12-202ENST00000559989 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSPG4P12-202ENST00000559989 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
CSPG4P12-202ENST00000559989 FBXW7Q969H0 707 aa16.72■□□□□ 0.27
CSPG4P12-202ENST00000559989 ANKRD45Q5TZF3 282 aa16.72■□□□□ 0.27
CSPG4P12-202ENST00000559989 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
CSPG4P12-202ENST00000559989 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
CSPG4P12-202ENST00000559989 MAGEC2Q9UBF1 373 aaPredicted RBP16.7■□□□□ 0.26
CSPG4P12-202ENST00000559989 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
CSPG4P12-202ENST00000559989 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
CSPG4P12-202ENST00000559989 CCAR1Q8IX12 1150 aaKnown RBP16.7■□□□□ 0.26
CSPG4P12-202ENST00000559989 NF2P35240 595 aa16.69■□□□□ 0.26
CSPG4P12-202ENST00000559989 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
CSPG4P12-202ENST00000559989 NUCB2P80303 420 aa16.69■□□□□ 0.26
CSPG4P12-202ENST00000559989 TXLNBQ8N3L3 684 aa16.69■□□□□ 0.26
CSPG4P12-202ENST00000559989 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
CSPG4P12-202ENST00000559989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.69■□□□□ 0.26
CSPG4P12-202ENST00000559989 STK26Q9P289 416 aa16.68■□□□□ 0.26
CSPG4P12-202ENST00000559989 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
CSPG4P12-202ENST00000559989 XBP1P17861 261 aa16.68■□□□□ 0.26
CSPG4P12-202ENST00000559989 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
CSPG4P12-202ENST00000559989 DHX8Q14562 1220 aaKnown RBP16.68■□□□□ 0.26
CSPG4P12-202ENST00000559989 LUC7LQ9NQ29 371 aaKnown RBP16.67■□□□□ 0.26
CSPG4P12-202ENST00000559989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSPG4P12-202ENST00000559989 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
CSPG4P12-202ENST00000559989 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
CSPG4P12-202ENST00000559989 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
CSPG4P12-202ENST00000559989 TMEM132AQ24JP5 1023 aa16.66■□□□□ 0.26
CSPG4P12-202ENST00000559989 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
CSPG4P12-202ENST00000559989 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
CSPG4P12-202ENST00000559989 CCDC91Q7Z6B0 441 aa16.65■□□□□ 0.26
CSPG4P12-202ENST00000559989 EEA1Q15075 1411 aa16.65■□□□□ 0.26
CSPG4P12-202ENST00000559989 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
CSPG4P12-202ENST00000559989 PPM1EQ8WY54 764 aa16.64■□□□□ 0.25
CSPG4P12-202ENST00000559989 CLUAP1Q96AJ1 413 aa16.64■□□□□ 0.25
CSPG4P12-202ENST00000559989 KIF7Q2M1P5 1343 aa16.64■□□□□ 0.25
CSPG4P12-202ENST00000559989 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
CSPG4P12-202ENST00000559989 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 TERF2IPQ9NYB0 399 aa16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 IQCEQ6IPM2 695 aa16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 STAMBPO95630 424 aa16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 ZNHIT6Q9NWK9 470 aaKnown RBP16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 CCDC181Q5TID7 509 aa16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
CSPG4P12-202ENST00000559989 CEP63Q96MT8 703 aa16.62■□□□□ 0.25
CSPG4P12-202ENST00000559989 SMC2O95347 1197 aa16.62■□□□□ 0.25
CSPG4P12-202ENST00000559989 ERLIN1O75477 346 aa16.62■□□□□ 0.25
CSPG4P12-202ENST00000559989 CENPHQ9H3R5 247 aa16.62■□□□□ 0.25
CSPG4P12-202ENST00000559989 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
CSPG4P12-202ENST00000559989 AMPHP49418 695 aa16.61■□□□□ 0.25
CSPG4P12-202ENST00000559989 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
CSPG4P12-202ENST00000559989 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
CSPG4P12-202ENST00000559989 TAX1BP1Q86VP1 789 aa16.61■□□□□ 0.25
CSPG4P12-202ENST00000559989 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
CSPG4P12-202ENST00000559989 SPATA24Q86W54 205 aa16.6■□□□□ 0.25
CSPG4P12-202ENST00000559989 CDK5RAP3Q96JB5 506 aa16.6■□□□□ 0.25
CSPG4P12-202ENST00000559989 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
CSPG4P12-202ENST00000559989 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
CSPG4P12-202ENST00000559989 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
CSPG4P12-202ENST00000559989 TXLNAP40222 546 aa16.59■□□□□ 0.25
CSPG4P12-202ENST00000559989 CCDC112Q8NEF3 446 aa16.59■□□□□ 0.25
CSPG4P12-202ENST00000559989 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
CSPG4P12-202ENST00000559989 DESP17661 470 aa16.59■□□□□ 0.25
CSPG4P12-202ENST00000559989 PDE4AP27815 886 aa16.59■□□□□ 0.25
CSPG4P12-202ENST00000559989 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
CSPG4P12-202ENST00000559989 MRE11P49959 708 aa16.58■□□□□ 0.25
CSPG4P12-202ENST00000559989 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.25
CSPG4P12-202ENST00000559989 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
CSPG4P12-202ENST00000559989 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
CSPG4P12-202ENST00000559989 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
CSPG4P12-202ENST00000559989 CFAP57Q96MR6 1250 aa16.58■□□□□ 0.24
CSPG4P12-202ENST00000559989 GOLGA6L10A0A0M3HER8 536 aa16.58■□□□□ 0.24
CSPG4P12-202ENST00000559989 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
CSPG4P12-202ENST00000559989 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms