RNA–Protein interactions for RNA: ENST00000559603.1

RNF213-208, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-208ENST00000559603 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
RNF213-208ENST00000559603 CHD2O14647 1828 aaKnown RBP24.14■■□□□ 1.46
RNF213-208ENST00000559603 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
RNF213-208ENST00000559603 TOM1O60784 492 aa24.14■■□□□ 1.45
RNF213-208ENST00000559603 CHGAP10645 457 aaKnown RBP24.13■■□□□ 1.45
RNF213-208ENST00000559603 HSPA1LP34931 641 aa24.12■■□□□ 1.45
RNF213-208ENST00000559603 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
RNF213-208ENST00000559603 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
RNF213-208ENST00000559603 PLEKHG1Q9ULL1 1385 aa24.11■■□□□ 1.45
RNF213-208ENST00000559603 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
RNF213-208ENST00000559603 RBM33Q96EV2 1170 aaKnown RBP24.1■■□□□ 1.45
RNF213-208ENST00000559603 HFM1A2PYH4 1435 aa24.1■■□□□ 1.45
RNF213-208ENST00000559603 DISP3Q9P2K9 1392 aa24.08■■□□□ 1.45
RNF213-208ENST00000559603 KCNA6P17658 529 aa24.08■■□□□ 1.45
RNF213-208ENST00000559603 BCANQ96GW7 911 aa24.06■■□□□ 1.44
RNF213-208ENST00000559603 TMEM94Q12767 1356 aa24.05■■□□□ 1.44
RNF213-208ENST00000559603 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
RNF213-208ENST00000559603 NRXN3Q9Y4C0 1643 aa24.04■■□□□ 1.44
RNF213-208ENST00000559603 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
RNF213-208ENST00000559603 ILDR2Q71H61 639 aa24.03■■□□□ 1.44
RNF213-208ENST00000559603 TRPM2O94759 1503 aa24.03■■□□□ 1.44
RNF213-208ENST00000559603 KIF1BO60333 1816 aa24.03■■□□□ 1.44
RNF213-208ENST00000559603 PROSER2Q86WR7 435 aaPredicted RBP24.01■■□□□ 1.43
RNF213-208ENST00000559603 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
RNF213-208ENST00000559603 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.99■■□□□ 1.43
RNF213-208ENST00000559603 TRIM52Q96A61 297 aa23.99■■□□□ 1.43
RNF213-208ENST00000559603 TBX22Q9Y458 520 aa23.98■■□□□ 1.43
RNF213-208ENST00000559603 HDGFP51858 240 aaKnown RBP23.97■■□□□ 1.43
RNF213-208ENST00000559603 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
RNF213-208ENST00000559603 NEXMIFQ5QGS0 1516 aa23.97■■□□□ 1.43
RNF213-208ENST00000559603 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.43
RNF213-208ENST00000559603 PTPRUQ92729 1446 aa23.95■■□□□ 1.42
RNF213-208ENST00000559603 ROBO1Q9Y6N7 1651 aa23.94■■□□□ 1.42
RNF213-208ENST00000559603 SETBP1Q9Y6X0 1596 aa23.94■■□□□ 1.42
RNF213-208ENST00000559603 FOXD1Q16676 465 aa23.93■■□□□ 1.42
RNF213-208ENST00000559603 ZNF326Q5BKZ1 582 aaKnown RBP23.92■■□□□ 1.42
RNF213-208ENST00000559603 SLC4A1APQ9BWU0 796 aaKnown RBP23.91■■□□□ 1.42
RNF213-208ENST00000559603 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
RNF213-208ENST00000559603 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
RNF213-208ENST00000559603 PPLO60437 1756 aa23.88■■□□□ 1.41
RNF213-208ENST00000559603 SETD1AO15047 1707 aaKnown RBP23.88■■□□□ 1.41
RNF213-208ENST00000559603 FAM135BQ49AJ0 1406 aa23.88■■□□□ 1.41
RNF213-208ENST00000559603 METP08581 1390 aa23.87■■□□□ 1.41
RNF213-208ENST00000559603 PIK3R4Q99570 1358 aa23.86■■□□□ 1.41
RNF213-208ENST00000559603 MSH6P52701 1360 aa23.85■■□□□ 1.41
RNF213-208ENST00000559603 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
RNF213-208ENST00000559603 PHLPP1O60346 1717 aa23.8■■□□□ 1.4
RNF213-208ENST00000559603 MPHOSPH9Q99550 1183 aa23.8■■□□□ 1.4
RNF213-208ENST00000559603 SLAIN2Q9P270 581 aa23.8■■□□□ 1.4
RNF213-208ENST00000559603 IFT172Q9UG01 1749 aa23.79■■□□□ 1.4
RNF213-208ENST00000559603 NCOA3Q9Y6Q9 1424 aa23.79■■□□□ 1.4
RNF213-208ENST00000559603 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
RNF213-208ENST00000559603 NALCNQ8IZF0 1738 aa23.76■■□□□ 1.39
RNF213-208ENST00000559603 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
RNF213-208ENST00000559603 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
RNF213-208ENST00000559603 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
RNF213-208ENST00000559603 COL16A1Q07092 1604 aaPredicted RBP23.73■■□□□ 1.39
RNF213-208ENST00000559603 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
RNF213-208ENST00000559603 CCDC144AA2RUR9 1427 aa23.7■■□□□ 1.38
RNF213-208ENST00000559603 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
RNF213-208ENST00000559603 SOCS7O14512 581 aa23.69■■□□□ 1.38
RNF213-208ENST00000559603 VGFO15240 615 aaPredicted RBP23.69■■□□□ 1.38
RNF213-208ENST00000559603 ADGRF5Q8IZF2 1346 aa23.68■■□□□ 1.38
RNF213-208ENST00000559603 RGL3Q3MIN7 710 aa23.67■■□□□ 1.38
RNF213-208ENST00000559603 CADPS2Q86UW7 1296 aa23.67■■□□□ 1.38
RNF213-208ENST00000559603 ATF3P18847 181 aa23.66■■□□□ 1.38
RNF213-208ENST00000559603 RGS17Q9UGC6 210 aaPredicted RBP23.66■■□□□ 1.38
RNF213-208ENST00000559603 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
RNF213-208ENST00000559603 AHDC1Q5TGY3 1603 aaPredicted RBP23.65■■□□□ 1.38
RNF213-208ENST00000559603 MST1RQ04912 1400 aa23.65■■□□□ 1.38
RNF213-208ENST00000559603 DCCP43146 1447 aa23.64■■□□□ 1.37
RNF213-208ENST00000559603 ADGRL3Q9HAR2 1447 aa23.64■■□□□ 1.37
RNF213-208ENST00000559603 BRINP3Q76B58 766 aa23.63■■□□□ 1.37
RNF213-208ENST00000559603 ASXL1Q8IXJ9 1541 aa23.63■■□□□ 1.37
RNF213-208ENST00000559603 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
RNF213-208ENST00000559603 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
RNF213-208ENST00000559603 NHSL1Q5SYE7 1610 aa23.61■■□□□ 1.37
RNF213-208ENST00000559603 PRAG1Q86YV5 1406 aa23.6■■□□□ 1.37
RNF213-208ENST00000559603 SHPRHQ149N8 1683 aa23.58■■□□□ 1.37
RNF213-208ENST00000559603 LRP6O75581 1613 aa23.56■■□□□ 1.36
RNF213-208ENST00000559603 JCADQ9P266 1359 aa23.56■■□□□ 1.36
RNF213-208ENST00000559603 DDX17Q92841 729 aaKnown RBP23.56■■□□□ 1.36
RNF213-208ENST00000559603 PIK3C2GO75747 1445 aa23.56■■□□□ 1.36
RNF213-208ENST00000559603 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
RNF213-208ENST00000559603 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
RNF213-208ENST00000559603 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
RNF213-208ENST00000559603 C1orf167Q5SNV9 1468 aa23.53■■□□□ 1.36
RNF213-208ENST00000559603 NRXN1Q9ULB1 1477 aa23.52■■□□□ 1.36
RNF213-208ENST00000559603 POTEAQ6S8J7 498 aa23.51■■□□□ 1.35
RNF213-208ENST00000559603 STK26Q9P289 416 aa23.51■■□□□ 1.35
RNF213-208ENST00000559603 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
RNF213-208ENST00000559603 LAMC1P11047 1609 aa23.49■■□□□ 1.35
RNF213-208ENST00000559603 WAPLQ7Z5K2 1190 aa23.49■■□□□ 1.35
RNF213-208ENST00000559603 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
RNF213-208ENST00000559603 TECPR2O15040 1411 aa23.49■■□□□ 1.35
RNF213-208ENST00000559603 LRPPRCP42704 1394 aaKnown RBP23.48■■□□□ 1.35
RNF213-208ENST00000559603 MYOM2P54296 1465 aa23.48■■□□□ 1.35
RNF213-208ENST00000559603 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
RNF213-208ENST00000559603 CDC42BPGQ6DT37 1551 aa23.47■■□□□ 1.35
RNF213-208ENST00000559603 YTHDC2Q9H6S0 1430 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms