RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 ZFYVE9O95405 1425 aa32.3■■■□□ 2.76
CRNDE-205ENST00000558952 LRRC7Q96NW7 1537 aa32.3■■■□□ 2.76
CRNDE-205ENST00000558952 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.28■■■□□ 2.76
CRNDE-205ENST00000558952 SLC26A8Q96RN1 970 aa32.28■■■□□ 2.76
CRNDE-205ENST00000558952 SPHKAPQ2M3C7 1700 aa32.28■■■□□ 2.76
CRNDE-205ENST00000558952 SCAF1Q9H7N4 1312 aaKnown RBP32.26■■■□□ 2.76
CRNDE-205ENST00000558952 PLEKHG1Q9ULL1 1385 aa32.25■■■□□ 2.75
CRNDE-205ENST00000558952 PIP4K2BP78356 416 aa32.23■■■□□ 2.75
CRNDE-205ENST00000558952 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
CRNDE-205ENST00000558952 KCNA6P17658 529 aa32.2■■■□□ 2.75
CRNDE-205ENST00000558952 SLC4A1APQ9BWU0 796 aaKnown RBP32.18■■■□□ 2.74
CRNDE-205ENST00000558952 NUTM2DQ5VT03 806 aaPredicted RBP32.17■■■□□ 2.74
CRNDE-205ENST00000558952 TRPM2O94759 1503 aa32.16■■■□□ 2.74
CRNDE-205ENST00000558952 ZNF326Q5BKZ1 582 aaKnown RBP32.14■■■□□ 2.74
CRNDE-205ENST00000558952 CLTCL1P53675 1640 aa32.11■■■□□ 2.73
CRNDE-205ENST00000558952 NWD1Q149M9 1564 aa32.11■■■□□ 2.73
CRNDE-205ENST00000558952 NKTRP30414 1462 aaKnown RBP32.11■■■□□ 2.73
CRNDE-205ENST00000558952 PROSER2Q86WR7 435 aaPredicted RBP32.11■■■□□ 2.73
CRNDE-205ENST00000558952 TBX22Q9Y458 520 aa32.11■■■□□ 2.73
CRNDE-205ENST00000558952 TMEM94Q12767 1356 aa32.09■■■□□ 2.73
CRNDE-205ENST00000558952 ALKQ9UM73 1620 aa32.08■■■□□ 2.73
CRNDE-205ENST00000558952 DIP2AQ14689 1571 aa32.08■■■□□ 2.73
CRNDE-205ENST00000558952 XIRP1Q702N8 1843 aaKnown RBP32.06■■■□□ 2.72
CRNDE-205ENST00000558952 ADAMTS13Q76LX8 1427 aa32.05■■■□□ 2.72
CRNDE-205ENST00000558952 HSPA1LP34931 641 aa32.04■■■□□ 2.72
CRNDE-205ENST00000558952 KIF1BO60333 1816 aa32.03■■■□□ 2.72
CRNDE-205ENST00000558952 CHD2O14647 1828 aaKnown RBP32.03■■■□□ 2.72
CRNDE-205ENST00000558952 ACIN1Q9UKV3 1341 aaKnown RBP32.02■■■□□ 2.72
CRNDE-205ENST00000558952 PIK3R4Q99570 1358 aa32.01■■■□□ 2.71
CRNDE-205ENST00000558952 RBM33Q96EV2 1170 aaKnown RBP32■■■□□ 2.71
CRNDE-205ENST00000558952 DISP3Q9P2K9 1392 aa31.99■■■□□ 2.71
CRNDE-205ENST00000558952 SETD5Q9C0A6 1442 aa31.99■■■□□ 2.71
CRNDE-205ENST00000558952 MPHOSPH9Q99550 1183 aa31.97■■■□□ 2.71
CRNDE-205ENST00000558952 MSH6P52701 1360 aa31.96■■■□□ 2.71
CRNDE-205ENST00000558952 NEXMIFQ5QGS0 1516 aa31.96■■■□□ 2.71
CRNDE-205ENST00000558952 FOXD1Q16676 465 aa31.96■■■□□ 2.71
CRNDE-205ENST00000558952 SETBP1Q9Y6X0 1596 aa31.96■■■□□ 2.71
CRNDE-205ENST00000558952 NRXN3Q9Y4C0 1643 aa31.91■■■□□ 2.7
CRNDE-205ENST00000558952 CCDC144AA2RUR9 1427 aa31.91■■■□□ 2.7
CRNDE-205ENST00000558952 C14orf37Q86TY3 774 aa31.9■■■□□ 2.7
CRNDE-205ENST00000558952 AMOTL2Q9Y2J4 779 aa31.9■■■□□ 2.7
CRNDE-205ENST00000558952 VGFO15240 615 aaPredicted RBP31.89■■■□□ 2.7
CRNDE-205ENST00000558952 RPGRIP1LQ68CZ1 1315 aa31.89■■■□□ 2.7
CRNDE-205ENST00000558952 NCOA3Q9Y6Q9 1424 aa31.89■■■□□ 2.7
CRNDE-205ENST00000558952 RAB3GAP2Q9H2M9 1393 aa31.86■■■□□ 2.69
CRNDE-205ENST00000558952 FAM135BQ49AJ0 1406 aa31.85■■■□□ 2.69
CRNDE-205ENST00000558952 PTPRUQ92729 1446 aa31.85■■■□□ 2.69
CRNDE-205ENST00000558952 METP08581 1390 aa31.81■■■□□ 2.68
CRNDE-205ENST00000558952 XRN1Q8IZH2 1706 aaKnown RBP31.79■■■□□ 2.68
CRNDE-205ENST00000558952 SLAIN2Q9P270 581 aa31.79■■■□□ 2.68
CRNDE-205ENST00000558952 C19orf44Q9H6X5 657 aa31.78■■■□□ 2.68
CRNDE-205ENST00000558952 ROBO1Q9Y6N7 1651 aa31.78■■■□□ 2.68
CRNDE-205ENST00000558952 PPLO60437 1756 aa31.77■■■□□ 2.68
CRNDE-205ENST00000558952 ATF3P18847 181 aa31.76■■■□□ 2.67
CRNDE-205ENST00000558952 RGL3Q3MIN7 710 aa31.76■■■□□ 2.67
CRNDE-205ENST00000558952 CADPS2Q86UW7 1296 aa31.75■■■□□ 2.67
CRNDE-205ENST00000558952 SPATA31E1Q6ZUB1 1445 aa31.73■■■□□ 2.67
CRNDE-205ENST00000558952 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
CRNDE-205ENST00000558952 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.72■■■□□ 2.67
CRNDE-205ENST00000558952 ANKRD30BQ9BXX2 1392 aa31.69■■■□□ 2.66
CRNDE-205ENST00000558952 DCCP43146 1447 aa31.66■■■□□ 2.66
CRNDE-205ENST00000558952 SETD1AO15047 1707 aaKnown RBP31.66■■■□□ 2.66
CRNDE-205ENST00000558952 HRCP23327 699 aa31.66■■■□□ 2.66
CRNDE-205ENST00000558952 ADGRF5Q8IZF2 1346 aa31.65■■■□□ 2.66
CRNDE-205ENST00000558952 ILDR2Q71H61 639 aa31.63■■■□□ 2.65
CRNDE-205ENST00000558952 IFT172Q9UG01 1749 aa31.63■■■□□ 2.65
CRNDE-205ENST00000558952 PTCH1Q13635 1447 aa31.62■■■□□ 2.65
CRNDE-205ENST00000558952 ADGRL3Q9HAR2 1447 aa31.61■■■□□ 2.65
CRNDE-205ENST00000558952 PHF23Q9BUL5 403 aaPredicted RBP31.61■■■□□ 2.65
CRNDE-205ENST00000558952 PHLPP1O60346 1717 aa31.59■■■□□ 2.65
CRNDE-205ENST00000558952 PRAG1Q86YV5 1406 aa31.57■■■□□ 2.64
CRNDE-205ENST00000558952 ROBO2Q9HCK4 1378 aa31.56■■■□□ 2.64
CRNDE-205ENST00000558952 NALCNQ8IZF0 1738 aa31.55■■■□□ 2.64
CRNDE-205ENST00000558952 PIK3C2GO75747 1445 aa31.54■■■□□ 2.64
CRNDE-205ENST00000558952 MST1RQ04912 1400 aa31.52■■■□□ 2.64
CRNDE-205ENST00000558952 BRINP3Q76B58 766 aa31.51■■■□□ 2.63
CRNDE-205ENST00000558952 JCADQ9P266 1359 aa31.5■■■□□ 2.63
CRNDE-205ENST00000558952 AHDC1Q5TGY3 1603 aaPredicted RBP31.49■■■□□ 2.63
CRNDE-205ENST00000558952 MYOM2P54296 1465 aa31.49■■■□□ 2.63
CRNDE-205ENST00000558952 STK26Q9P289 416 aa31.48■■■□□ 2.63
CRNDE-205ENST00000558952 COL16A1Q07092 1604 aaPredicted RBP31.48■■■□□ 2.63
CRNDE-205ENST00000558952 ASXL1Q8IXJ9 1541 aa31.47■■■□□ 2.63
CRNDE-205ENST00000558952 LRPPRCP42704 1394 aaKnown RBP31.46■■■□□ 2.63
CRNDE-205ENST00000558952 TMEM132EQ6IEE7 984 aa31.46■■■□□ 2.63
CRNDE-205ENST00000558952 NRXN1Q9ULB1 1477 aa31.44■■■□□ 2.62
CRNDE-205ENST00000558952 TECPR2O15040 1411 aa31.43■■■□□ 2.62
CRNDE-205ENST00000558952 C14orf93Q9H972 538 aaKnown RBP31.43■■■□□ 2.62
CRNDE-205ENST00000558952 LAMC1P11047 1609 aa31.42■■■□□ 2.62
CRNDE-205ENST00000558952 ABCC11Q96J66 1382 aa31.42■■■□□ 2.62
CRNDE-205ENST00000558952 YTHDC2Q9H6S0 1430 aaKnown RBP31.41■■■□□ 2.62
CRNDE-205ENST00000558952 SOCS7O14512 581 aa31.4■■■□□ 2.62
CRNDE-205ENST00000558952 C1orf167Q5SNV9 1468 aa31.4■■■□□ 2.62
CRNDE-205ENST00000558952 KNDC1Q76NI1 1749 aa31.39■■■□□ 2.62
CRNDE-205ENST00000558952 CFAP70Q5T0N1 1121 aa31.39■■■□□ 2.62
CRNDE-205ENST00000558952 DHX57Q6P158 1386 aaKnown RBP31.37■■■□□ 2.61
CRNDE-205ENST00000558952 WAPLQ7Z5K2 1190 aa31.36■■■□□ 2.61
CRNDE-205ENST00000558952 DCAF11Q8TEB1 546 aa31.36■■■□□ 2.61
CRNDE-205ENST00000558952 NHSL1Q5SYE7 1610 aa31.35■■■□□ 2.61
CRNDE-205ENST00000558952 SPATA31A6Q5VVP1 1343 aa31.35■■■□□ 2.61
CRNDE-205ENST00000558952 KDM2AQ9Y2K7 1162 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms