RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SPHKAPQ2M3C7 1700 aa20.54■□□□□ 0.88
TSPAN3-205ENST00000558745 RIMS2Q9UQ26 1411 aa20.52■□□□□ 0.87
TSPAN3-205ENST00000558745 BCANQ96GW7 911 aa20.52■□□□□ 0.87
TSPAN3-205ENST00000558745 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-205ENST00000558745 ZNF326Q5BKZ1 582 aaKnown RBP20.51■□□□□ 0.87
TSPAN3-205ENST00000558745 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
TSPAN3-205ENST00000558745 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
TSPAN3-205ENST00000558745 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
TSPAN3-205ENST00000558745 IQGAP1P46940 1657 aa20.49■□□□□ 0.87
TSPAN3-205ENST00000558745 PPP1R15AO75807 674 aaPredicted RBP20.49■□□□□ 0.87
TSPAN3-205ENST00000558745 TRPM2O94759 1503 aa20.48■□□□□ 0.87
TSPAN3-205ENST00000558745 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
TSPAN3-205ENST00000558745 HRCP23327 699 aa20.46■□□□□ 0.87
TSPAN3-205ENST00000558745 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
TSPAN3-205ENST00000558745 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSPAN3-205ENST00000558745 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
TSPAN3-205ENST00000558745 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
TSPAN3-205ENST00000558745 PLEKHG1Q9ULL1 1385 aa20.41■□□□□ 0.86
TSPAN3-205ENST00000558745 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-205ENST00000558745 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-205ENST00000558745 STRCP1A6NGW2 1772 aa20.39■□□□□ 0.85
TSPAN3-205ENST00000558745 KIF1BO60333 1816 aa20.39■□□□□ 0.85
TSPAN3-205ENST00000558745 CCDC144AA2RUR9 1427 aa20.39■□□□□ 0.85
TSPAN3-205ENST00000558745 RBM33Q96EV2 1170 aaKnown RBP20.36■□□□□ 0.85
TSPAN3-205ENST00000558745 ADAMTS13Q76LX8 1427 aa20.35■□□□□ 0.85
TSPAN3-205ENST00000558745 KCNA6P17658 529 aa20.35■□□□□ 0.85
TSPAN3-205ENST00000558745 TBX22Q9Y458 520 aa20.35■□□□□ 0.85
TSPAN3-205ENST00000558745 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
TSPAN3-205ENST00000558745 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
TSPAN3-205ENST00000558745 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
TSPAN3-205ENST00000558745 CPS1P31327 1500 aa20.32■□□□□ 0.84
TSPAN3-205ENST00000558745 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
TSPAN3-205ENST00000558745 RPGRIP1LQ68CZ1 1315 aa20.32■□□□□ 0.84
TSPAN3-205ENST00000558745 LRRC7Q96NW7 1537 aa20.31■□□□□ 0.84
TSPAN3-205ENST00000558745 ADGRF5Q8IZF2 1346 aa20.3■□□□□ 0.84
TSPAN3-205ENST00000558745 VGFO15240 615 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-205ENST00000558745 HSPA1LP34931 641 aa20.29■□□□□ 0.84
TSPAN3-205ENST00000558745 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-205ENST00000558745 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
TSPAN3-205ENST00000558745 NRXN3Q9Y4C0 1643 aa20.27■□□□□ 0.84
TSPAN3-205ENST00000558745 AMOTL2Q9Y2J4 779 aa20.27■□□□□ 0.83
TSPAN3-205ENST00000558745 METP08581 1390 aa20.26■□□□□ 0.83
TSPAN3-205ENST00000558745 PTPRUQ92729 1446 aa20.26■□□□□ 0.83
TSPAN3-205ENST00000558745 TOM1O60784 492 aa20.26■□□□□ 0.83
TSPAN3-205ENST00000558745 TMEM94Q12767 1356 aa20.25■□□□□ 0.83
TSPAN3-205ENST00000558745 PPLO60437 1756 aa20.25■□□□□ 0.83
TSPAN3-205ENST00000558745 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
TSPAN3-205ENST00000558745 SETBP1Q9Y6X0 1596 aa20.23■□□□□ 0.83
TSPAN3-205ENST00000558745 PIP4K2BP78356 416 aa20.23■□□□□ 0.83
TSPAN3-205ENST00000558745 KDM2AQ9Y2K7 1162 aa20.23■□□□□ 0.83
TSPAN3-205ENST00000558745 XIRP1Q702N8 1843 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-205ENST00000558745 DIP2AQ14689 1571 aa20.2■□□□□ 0.82
TSPAN3-205ENST00000558745 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
TSPAN3-205ENST00000558745 SIN3AQ96ST3 1273 aa20.2■□□□□ 0.82
TSPAN3-205ENST00000558745 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
TSPAN3-205ENST00000558745 DCAF11Q8TEB1 546 aa20.19■□□□□ 0.82
TSPAN3-205ENST00000558745 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
TSPAN3-205ENST00000558745 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-205ENST00000558745 ALKQ9UM73 1620 aa20.17■□□□□ 0.82
TSPAN3-205ENST00000558745 IFT172Q9UG01 1749 aa20.17■□□□□ 0.82
TSPAN3-205ENST00000558745 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
TSPAN3-205ENST00000558745 NKTRP30414 1462 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-205ENST00000558745 CFAP70Q5T0N1 1121 aa20.15■□□□□ 0.82
TSPAN3-205ENST00000558745 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
TSPAN3-205ENST00000558745 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
TSPAN3-205ENST00000558745 STK26Q9P289 416 aa20.14■□□□□ 0.81
TSPAN3-205ENST00000558745 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
TSPAN3-205ENST00000558745 PIK3C2GO75747 1445 aa20.11■□□□□ 0.81
TSPAN3-205ENST00000558745 C14orf93Q9H972 538 aaKnown RBP20.11■□□□□ 0.81
TSPAN3-205ENST00000558745 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-205ENST00000558745 ROBO2Q9HCK4 1378 aa20.09■□□□□ 0.81
TSPAN3-205ENST00000558745 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
TSPAN3-205ENST00000558745 MSH6P52701 1360 aa20.09■□□□□ 0.81
TSPAN3-205ENST00000558745 MYOM2P54296 1465 aa20.08■□□□□ 0.8
TSPAN3-205ENST00000558745 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
TSPAN3-205ENST00000558745 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
TSPAN3-205ENST00000558745 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
TSPAN3-205ENST00000558745 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
TSPAN3-205ENST00000558745 SLAIN2Q9P270 581 aa20.05■□□□□ 0.8
TSPAN3-205ENST00000558745 NCOA3Q9Y6Q9 1424 aa20.03■□□□□ 0.8
TSPAN3-205ENST00000558745 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
TSPAN3-205ENST00000558745 ATF3P18847 181 aa20.02■□□□□ 0.8
TSPAN3-205ENST00000558745 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-205ENST00000558745 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.01■□□□□ 0.79
TSPAN3-205ENST00000558745 PLEKHH1Q9ULM0 1364 aa20.01■□□□□ 0.79
TSPAN3-205ENST00000558745 ABCC11Q96J66 1382 aa20■□□□□ 0.79
TSPAN3-205ENST00000558745 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
TSPAN3-205ENST00000558745 STAC3Q96MF2 364 aa20■□□□□ 0.79
TSPAN3-205ENST00000558745 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
TSPAN3-205ENST00000558745 TRAK1Q9UPV9 953 aa19.99■□□□□ 0.79
TSPAN3-205ENST00000558745 SAFB2Q14151 953 aaKnown RBP eCLIP19.98■□□□□ 0.79
TSPAN3-205ENST00000558745 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
TSPAN3-205ENST00000558745 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
TSPAN3-205ENST00000558745 ADGRL3Q9HAR2 1447 aa19.97■□□□□ 0.79
TSPAN3-205ENST00000558745 TECPR2O15040 1411 aa19.95■□□□□ 0.78
TSPAN3-205ENST00000558745 PRAG1Q86YV5 1406 aa19.95■□□□□ 0.78
TSPAN3-205ENST00000558745 PRAM1Q96QH2 718 aa19.95■□□□□ 0.78
TSPAN3-205ENST00000558745 RGS17Q9UGC6 210 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-205ENST00000558745 NALCNQ8IZF0 1738 aa19.94■□□□□ 0.78
TSPAN3-205ENST00000558745 ADGRB1O14514 1584 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms