RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
COPS2-204ENST00000558545 ITGBL1O95965 494 aaPredicted RBP12.07□□□□□ -0.48
COPS2-204ENST00000558545 MAP2K5Q13163 448 aa12.06□□□□□ -0.48
COPS2-204ENST00000558545 RNF40O75150 1001 aa12.04□□□□□ -0.48
COPS2-204ENST00000558545 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
COPS2-204ENST00000558545 IRF6O14896 467 aa12□□□□□ -0.49
COPS2-204ENST00000558545 APLP1P51693 650 aa12□□□□□ -0.49
COPS2-204ENST00000558545 PHOX2BQ99453 314 aa12□□□□□ -0.49
COPS2-204ENST00000558545 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
COPS2-204ENST00000558545 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
COPS2-204ENST00000558545 ZMYND10O75800 440 aa11.96□□□□□ -0.49
COPS2-204ENST00000558545 KCNC4Q03721 635 aa11.96□□□□□ -0.49
COPS2-204ENST00000558545 TJAP1Q5JTD0 557 aa11.96□□□□□ -0.49
COPS2-204ENST00000558545 ZC3H15Q8WU90 426 aaKnown RBP11.96□□□□□ -0.49
COPS2-204ENST00000558545 SLC10A3P09131 477 aa11.95□□□□□ -0.5
COPS2-204ENST00000558545 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
COPS2-204ENST00000558545 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
COPS2-204ENST00000558545 CCDC102AQ96A19 550 aa11.93□□□□□ -0.5
COPS2-204ENST00000558545 MTRQ99707 1265 aa11.93□□□□□ -0.5
COPS2-204ENST00000558545 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
COPS2-204ENST00000558545 A0A0G2JS52 829 aa11.92□□□□□ -0.5
COPS2-204ENST00000558545 KMT5BQ4FZB7 885 aa11.92□□□□□ -0.5
COPS2-204ENST00000558545 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
COPS2-204ENST00000558545 CFHP08603 1231 aa11.91□□□□□ -0.5
COPS2-204ENST00000558545 SULF1Q8IWU6 871 aa11.9□□□□□ -0.5
COPS2-204ENST00000558545 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
COPS2-204ENST00000558545 BCANQ96GW7 911 aa11.9□□□□□ -0.5
COPS2-204ENST00000558545 PCDHB3Q9Y5E6 796 aa11.88□□□□□ -0.51
COPS2-204ENST00000558545 RGS20O76081 388 aa11.87□□□□□ -0.51
COPS2-204ENST00000558545 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
COPS2-204ENST00000558545 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
COPS2-204ENST00000558545 RDH13Q8NBN7 331 aa11.84□□□□□ -0.51
COPS2-204ENST00000558545 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
COPS2-204ENST00000558545 COPS2P61201 443 aa11.83□□□□□ -0.52
COPS2-204ENST00000558545 MDM2Q00987 491 aaPredicted RBP11.83□□□□□ -0.52
COPS2-204ENST00000558545 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
COPS2-204ENST00000558545 ZPR1O75312 459 aa11.82□□□□□ -0.52
COPS2-204ENST00000558545 CLCN1P35523 988 aa11.82□□□□□ -0.52
COPS2-204ENST00000558545 GCGRP47871 477 aa11.82□□□□□ -0.52
COPS2-204ENST00000558545 BLOC1S3Q6QNY0 202 aa11.82□□□□□ -0.52
COPS2-204ENST00000558545 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
COPS2-204ENST00000558545 CD46P15529 392 aa11.81□□□□□ -0.52
COPS2-204ENST00000558545 AMHR2Q16671 573 aa11.8□□□□□ -0.52
COPS2-204ENST00000558545 NR1I2O75469 434 aa11.78□□□□□ -0.52
COPS2-204ENST00000558545 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
COPS2-204ENST00000558545 NKX2-3Q8TAU0 364 aa11.76□□□□□ -0.53
COPS2-204ENST00000558545 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
COPS2-204ENST00000558545 FUT2Q10981 343 aa11.75□□□□□ -0.53
COPS2-204ENST00000558545 MORN1Q5T089 497 aa11.75□□□□□ -0.53
COPS2-204ENST00000558545 AK7Q96M32 723 aa11.75□□□□□ -0.53
COPS2-204ENST00000558545 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
COPS2-204ENST00000558545 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
COPS2-204ENST00000558545 TRIM66O15016 1216 aa11.72□□□□□ -0.53
COPS2-204ENST00000558545 PUS10Q3MIT2 529 aaKnown RBP11.72□□□□□ -0.53
COPS2-204ENST00000558545 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
COPS2-204ENST00000558545 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
COPS2-204ENST00000558545 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
COPS2-204ENST00000558545 TLL1O43897 1013 aa11.7□□□□□ -0.54
COPS2-204ENST00000558545 KDM4AO75164 1064 aa11.7□□□□□ -0.54
COPS2-204ENST00000558545 ADH1BP00325 375 aa11.7□□□□□ -0.54
COPS2-204ENST00000558545 GGCXP38435 758 aa11.7□□□□□ -0.54
COPS2-204ENST00000558545 USP46P62068 366 aa11.7□□□□□ -0.54
COPS2-204ENST00000558545 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
COPS2-204ENST00000558545 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
COPS2-204ENST00000558545 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
COPS2-204ENST00000558545 THAP11Q96EK4 314 aa11.68□□□□□ -0.54
COPS2-204ENST00000558545 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
COPS2-204ENST00000558545 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
COPS2-204ENST00000558545 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
COPS2-204ENST00000558545 PARP9Q8IXQ6 854 aa11.66□□□□□ -0.54
COPS2-204ENST00000558545 SPSB2Q99619 263 aa11.65□□□□□ -0.54
COPS2-204ENST00000558545 FMNL1O95466 1100 aaPredicted RBP11.64□□□□□ -0.55
COPS2-204ENST00000558545 HOXA2O43364 376 aa11.63□□□□□ -0.55
COPS2-204ENST00000558545 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
COPS2-204ENST00000558545 RNF223E7ERA6 249 aa11.62□□□□□ -0.55
COPS2-204ENST00000558545 S1PR4O95977 384 aa11.62□□□□□ -0.55
COPS2-204ENST00000558545 PDE4DQ08499 809 aa11.62□□□□□ -0.55
COPS2-204ENST00000558545 Q3C1V9 767 aa11.62□□□□□ -0.55
COPS2-204ENST00000558545 SLC6A16Q9GZN6 736 aa11.62□□□□□ -0.55
COPS2-204ENST00000558545 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
COPS2-204ENST00000558545 ANKLE1Q8NAG6 615 aa11.61□□□□□ -0.55
COPS2-204ENST00000558545 V9GY48 417 aaPredicted RBP11.61□□□□□ -0.55
COPS2-204ENST00000558545 MSS51Q4VC12 460 aa11.59□□□□□ -0.55
COPS2-204ENST00000558545 MS4A1P11836 297 aa11.58□□□□□ -0.56
COPS2-204ENST00000558545 RNF19BQ6ZMZ0 732 aa11.58□□□□□ -0.56
COPS2-204ENST00000558545 FAM160A2Q8N612 972 aaPredicted RBP11.58□□□□□ -0.56
COPS2-204ENST00000558545 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
COPS2-204ENST00000558545 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
COPS2-204ENST00000558545 BEGAINQ9BUH8 593 aa11.57□□□□□ -0.56
COPS2-204ENST00000558545 HLA-CQ95604 372 aa11.56□□□□□ -0.56
COPS2-204ENST00000558545 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
COPS2-204ENST00000558545 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
COPS2-204ENST00000558545 GJA5P36382 358 aa11.53□□□□□ -0.56
COPS2-204ENST00000558545 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
COPS2-204ENST00000558545 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
COPS2-204ENST00000558545 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
COPS2-204ENST00000558545 FDX1P10109 184 aa11.51□□□□□ -0.57
COPS2-204ENST00000558545 MMP16P51512 607 aa11.51□□□□□ -0.57
COPS2-204ENST00000558545 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
COPS2-204ENST00000558545 IRX2Q9BZI1 471 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms