RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 RALBP1Q15311 655 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 FAM161AQ3B820 660 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 GCC2Q8IWJ2 1684 aa6.59□□□□□ -1.36
HMG20A-204ENST00000558288 ROCK2O75116 1388 aaKnown RBP6.58□□□□□ -1.36
HMG20A-204ENST00000558288 ZMYM3Q14202 1370 aa6.58□□□□□ -1.36
HMG20A-204ENST00000558288 ARHGEF40Q8TER5 1519 aa6.58□□□□□ -1.36
HMG20A-204ENST00000558288 NAP1L5Q96NT1 182 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-204ENST00000558288 SAMD9Q5K651 1589 aa6.58□□□□□ -1.36
HMG20A-204ENST00000558288 ANKLE2Q86XL3 938 aa6.58□□□□□ -1.36
HMG20A-204ENST00000558288 RBM33Q96EV2 1170 aaKnown RBP6.58□□□□□ -1.36
HMG20A-204ENST00000558288 POLR1AO95602 1720 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-204ENST00000558288 BCORL1Q5H9F3 1711 aa6.57□□□□□ -1.36
HMG20A-204ENST00000558288 C20orf194Q5TEA3 1177 aa6.57□□□□□ -1.36
HMG20A-204ENST00000558288 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
HMG20A-204ENST00000558288 LRPPRCP42704 1394 aaKnown RBP6.57□□□□□ -1.36
HMG20A-204ENST00000558288 ST20-MTHFSA0A0A6YYL1 179 aa6.57□□□□□ -1.36
HMG20A-204ENST00000558288 CC2D1BQ5T0F9 858 aaKnown RBP6.57□□□□□ -1.36
HMG20A-204ENST00000558288 CENPQQ7L2Z9 268 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-204ENST00000558288 VSIG10Q8N0Z9 540 aa6.57□□□□□ -1.36
HMG20A-204ENST00000558288 SLKQ9H2G2 1235 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-204ENST00000558288 POGKQ9P215 609 aa6.57□□□□□ -1.36
HMG20A-204ENST00000558288 KTN1Q86UP2 1357 aaKnown RBP6.56□□□□□ -1.36
HMG20A-204ENST00000558288 MAGI2Q86UL8 1455 aa6.56□□□□□ -1.36
HMG20A-204ENST00000558288 CFAP74Q9C0B2 1584 aa6.56□□□□□ -1.36
HMG20A-204ENST00000558288 THEMISQ8N1K5 641 aaPredicted RBP6.56□□□□□ -1.36
HMG20A-204ENST00000558288 SOCS7O14512 581 aa6.56□□□□□ -1.36
HMG20A-204ENST00000558288 HSPA1LP34931 641 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 PKD2Q13563 968 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 C8orf34Q49A92 452 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 LRRIQ1Q96JM4 1722 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 FER1L4A9Z1Z3 1794 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 ADAMTSL3P82987 1691 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 POTEDQ86YR6 584 aa6.55□□□□□ -1.36
HMG20A-204ENST00000558288 RRAGDQ9NQL2 400 aaPredicted RBP6.55□□□□□ -1.36
HMG20A-204ENST00000558288 TCOF1Q13428 1488 aaKnown RBP6.54□□□□□ -1.36
HMG20A-204ENST00000558288 L1TD1Q5T7N2 865 aaKnown RBP6.54□□□□□ -1.36
HMG20A-204ENST00000558288 EID1Q9Y6B2 187 aa6.54□□□□□ -1.36
HMG20A-204ENST00000558288 FRMPD1Q5SYB0 1578 aa6.54□□□□□ -1.36
HMG20A-204ENST00000558288 PLEKHG5O94827 1062 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 BECN1Q14457 450 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 NUTM2DQ5VT03 806 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-204ENST00000558288 TXNDC2Q86VQ3 553 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-204ENST00000558288 PNNQ9H307 717 aaKnown RBP6.53□□□□□ -1.36
HMG20A-204ENST00000558288 MYO5CQ9NQX4 1742 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 GZF1Q9H116 711 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-204ENST00000558288 SYCP2Q9BX26 1530 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 DAPK1P53355 1430 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 KDM2BQ8NHM5 1336 aa6.53□□□□□ -1.36
HMG20A-204ENST00000558288 HSP90AA1P07900 732 aaKnown RBP6.52□□□□□ -1.37
HMG20A-204ENST00000558288 HSP90AA2PQ14568 343 aaPredicted RBP6.52□□□□□ -1.37
HMG20A-204ENST00000558288 SLC26A8Q96RN1 970 aa6.52□□□□□ -1.37
HMG20A-204ENST00000558288 RICTORQ6R327 1708 aa6.52□□□□□ -1.37
HMG20A-204ENST00000558288 KDM5CP41229 1560 aa6.52□□□□□ -1.37
HMG20A-204ENST00000558288 SPRYD3Q8NCJ5 442 aa6.52□□□□□ -1.37
HMG20A-204ENST00000558288 MEX3CQ5U5Q3 659 aaKnown RBP6.51□□□□□ -1.37
HMG20A-204ENST00000558288 ZMYND15Q9H091 742 aa6.51□□□□□ -1.37
HMG20A-204ENST00000558288 TNRQ92752 1358 aa6.51□□□□□ -1.37
HMG20A-204ENST00000558288 A2MP01023 1474 aa6.51□□□□□ -1.37
HMG20A-204ENST00000558288 GOLGA6L3A6NEY3 463 aa6.51□□□□□ -1.37
HMG20A-204ENST00000558288 WDR43Q15061 677 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMG20A-204ENST00000558288 ROCK1Q13464 1354 aa6.51□□□□□ -1.37
HMG20A-204ENST00000558288 ABCC5O15440 1437 aa6.51□□□□□ -1.37
HMG20A-204ENST00000558288 PROSER2Q86WR7 435 aaPredicted RBP6.51□□□□□ -1.37
HMG20A-204ENST00000558288 KIAA1107Q9UPP5 1409 aa6.5□□□□□ -1.37
HMG20A-204ENST00000558288 SETD1BQ9UPS6 1966 aaKnown RBP6.5□□□□□ -1.37
HMG20A-204ENST00000558288 CANXP27824 592 aaKnown RBP6.5□□□□□ -1.37
HMG20A-204ENST00000558288 CAMSAP1Q5T5Y3 1602 aa6.5□□□□□ -1.37
HMG20A-204ENST00000558288 ARHGEF12Q9NZN5 1544 aa6.5□□□□□ -1.37
HMG20A-204ENST00000558288 UPF2Q9HAU5 1272 aaKnown RBP6.49□□□□□ -1.37
HMG20A-204ENST00000558288 GPATCH8Q9UKJ3 1502 aaKnown RBP6.49□□□□□ -1.37
HMG20A-204ENST00000558288 PZPP20742 1482 aa6.49□□□□□ -1.37
HMG20A-204ENST00000558288 MBD5Q9P267 1494 aa6.49□□□□□ -1.37
HMG20A-204ENST00000558288 ADAMTS8Q9UP79 889 aa6.49□□□□□ -1.37
HMG20A-204ENST00000558288 PARD3Q8TEW0 1356 aa6.49□□□□□ -1.37
HMG20A-204ENST00000558288 NUTM2BA6NNL0 878 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-204ENST00000558288 NUTM2EB1AL46 878 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-204ENST00000558288 RGL3Q3MIN7 710 aa6.49□□□□□ -1.37
HMG20A-204ENST00000558288 NUTM2AQ8IVF1 878 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-204ENST00000558288 GOLGA2Q08379 1002 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 PANK3Q9H999 370 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 RALGAPBQ86X10 1494 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 MLH3Q9UHC1 1453 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 ZMYM4Q5VZL5 1548 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 SEC24BO95487 1268 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 PANK2Q9BZ23 570 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 DIP2CQ9Y2E4 1556 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 NUP155O75694 1391 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
HMG20A-204ENST00000558288 XRCC6P12956 609 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMG20A-204ENST00000558288 RSPH4AQ5TD94 716 aa6.47□□□□□ -1.37
HMG20A-204ENST00000558288 DUSP27Q5VZP5 1158 aa6.47□□□□□ -1.37
HMG20A-204ENST00000558288 CCDC146Q8IYE0 955 aa6.47□□□□□ -1.37
HMG20A-204ENST00000558288 KANK1Q14678 1352 aa6.47□□□□□ -1.37
HMG20A-204ENST00000558288 ATP7AQ04656 1500 aa6.47□□□□□ -1.37
HMG20A-204ENST00000558288 RRP9O43818 475 aaKnown RBP6.47□□□□□ -1.37
HMG20A-204ENST00000558288 FAM135AQ9P2D6 1515 aa6.46□□□□□ -1.37
HMG20A-204ENST00000558288 ABCA6Q8N139 1617 aa6.46□□□□□ -1.37
HMG20A-204ENST00000558288 BCAR3O75815 825 aa6.46□□□□□ -1.37
HMG20A-204ENST00000558288 IGHDP01880 384 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms