RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 KANK4Q5T7N3 995 aaPredicted RBP10.42□□□□□ -0.74
MARK3-212ENST00000558223 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
MARK3-212ENST00000558223 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
MARK3-212ENST00000558223 TIAM1Q13009 1591 aa10.42□□□□□ -0.74
MARK3-212ENST00000558223 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
MARK3-212ENST00000558223 MLLT3P42568 568 aaPredicted RBP10.41□□□□□ -0.74
MARK3-212ENST00000558223 LRRC9Q6ZRR7 1453 aa10.41□□□□□ -0.74
MARK3-212ENST00000558223 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.74
MARK3-212ENST00000558223 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
MARK3-212ENST00000558223 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
MARK3-212ENST00000558223 CTTNBP2Q8WZ74 1663 aa10.39□□□□□ -0.75
MARK3-212ENST00000558223 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
MARK3-212ENST00000558223 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
MARK3-212ENST00000558223 WDR62O43379 1518 aa10.38□□□□□ -0.75
MARK3-212ENST00000558223 NCKAP5LQ9HCH0 1330 aa10.38□□□□□ -0.75
MARK3-212ENST00000558223 FOXD4L5Q5VV16 416 aaPredicted RBP10.38□□□□□ -0.75
MARK3-212ENST00000558223 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
MARK3-212ENST00000558223 FOXD4L4Q8WXT5 416 aaPredicted RBP10.38□□□□□ -0.75
MARK3-212ENST00000558223 THOC2Q8NI27 1593 aaKnown RBP10.38□□□□□ -0.75
MARK3-212ENST00000558223 KIF21AQ7Z4S6 1674 aa10.38□□□□□ -0.75
MARK3-212ENST00000558223 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
MARK3-212ENST00000558223 MFSD10Q14728 455 aa10.36□□□□□ -0.75
MARK3-212ENST00000558223 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
MARK3-212ENST00000558223 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
MARK3-212ENST00000558223 SAMD9Q5K651 1589 aa10.35□□□□□ -0.75
MARK3-212ENST00000558223 E9PSI1 815 aa10.34□□□□□ -0.75
MARK3-212ENST00000558223 CCDC18Q5T9S5 1454 aa10.34□□□□□ -0.75
MARK3-212ENST00000558223 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
MARK3-212ENST00000558223 ERBB3P21860 1342 aa10.33□□□□□ -0.76
MARK3-212ENST00000558223 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
MARK3-212ENST00000558223 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
MARK3-212ENST00000558223 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
MARK3-212ENST00000558223 FBXW7Q969H0 707 aa10.33□□□□□ -0.76
MARK3-212ENST00000558223 ERCC6Q03468 1493 aa10.32□□□□□ -0.76
MARK3-212ENST00000558223 KIF3CO14782 793 aa10.32□□□□□ -0.76
MARK3-212ENST00000558223 CAMK2BQ13554 666 aa10.32□□□□□ -0.76
MARK3-212ENST00000558223 MCM6Q14566 821 aa10.32□□□□□ -0.76
MARK3-212ENST00000558223 ZNF428Q96B54 188 aa10.32□□□□□ -0.76
MARK3-212ENST00000558223 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
MARK3-212ENST00000558223 C2orf72A6NCS6 295 aa10.31□□□□□ -0.76
MARK3-212ENST00000558223 GPR153Q6NV75 609 aa10.31□□□□□ -0.76
MARK3-212ENST00000558223 KIAA0586Q9BVV6 1533 aa10.31□□□□□ -0.76
MARK3-212ENST00000558223 PCF11O94913 1555 aaKnown RBP10.31□□□□□ -0.76
MARK3-212ENST00000558223 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
MARK3-212ENST00000558223 SNAPC4Q5SXM2 1469 aa10.3□□□□□ -0.76
MARK3-212ENST00000558223 MAGI1Q96QZ7 1491 aaPredicted RBP10.3□□□□□ -0.76
MARK3-212ENST00000558223 UGGT2Q9NYU1 1516 aa10.3□□□□□ -0.76
MARK3-212ENST00000558223 RIMBP2O15034 1052 aa10.3□□□□□ -0.76
MARK3-212ENST00000558223 HSP90B1P14625 803 aaKnown RBP10.3□□□□□ -0.76
MARK3-212ENST00000558223 CDK11BP21127 795 aaKnown RBP10.3□□□□□ -0.76
MARK3-212ENST00000558223 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
MARK3-212ENST00000558223 ATP1B4Q9UN42 357 aaPredicted RBP10.3□□□□□ -0.76
MARK3-212ENST00000558223 CDK11AQ9UQ88 783 aaPredicted RBP10.3□□□□□ -0.76
MARK3-212ENST00000558223 IQGAP2Q13576 1575 aa10.3□□□□□ -0.76
MARK3-212ENST00000558223 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
MARK3-212ENST00000558223 AMHR2Q16671 573 aa10.29□□□□□ -0.76
MARK3-212ENST00000558223 SETD5Q9C0A6 1442 aa10.29□□□□□ -0.76
MARK3-212ENST00000558223 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
MARK3-212ENST00000558223 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
MARK3-212ENST00000558223 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
MARK3-212ENST00000558223 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.76
MARK3-212ENST00000558223 PDE4CQ08493 712 aa10.27□□□□□ -0.77
MARK3-212ENST00000558223 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
MARK3-212ENST00000558223 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
MARK3-212ENST00000558223 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
MARK3-212ENST00000558223 EHBP1L1Q8N3D4 1523 aa10.27□□□□□ -0.77
MARK3-212ENST00000558223 IRF5Q13568 498 aa10.26□□□□□ -0.77
MARK3-212ENST00000558223 ARSIQ5FYB1 569 aa10.26□□□□□ -0.77
MARK3-212ENST00000558223 DIEXFQ68CQ4 756 aaKnown RBP10.26□□□□□ -0.77
MARK3-212ENST00000558223 PATL2C9JE40 543 aaKnown RBP10.25□□□□□ -0.77
MARK3-212ENST00000558223 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
MARK3-212ENST00000558223 HECW1Q76N89 1606 aa10.25□□□□□ -0.77
MARK3-212ENST00000558223 FGD6Q6ZV73 1430 aa10.24□□□□□ -0.77
MARK3-212ENST00000558223 GRIN2AQ12879 1464 aa10.24□□□□□ -0.77
MARK3-212ENST00000558223 IRF6O14896 467 aa10.24□□□□□ -0.77
MARK3-212ENST00000558223 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
MARK3-212ENST00000558223 FAM50AQ14320 339 aaKnown RBP10.24□□□□□ -0.77
MARK3-212ENST00000558223 KHSRPQ92945 711 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■□□□□ 9.4
MARK3-212ENST00000558223 MYOM3Q5VTT5 1437 aa10.24□□□□□ -0.77
MARK3-212ENST00000558223 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
MARK3-212ENST00000558223 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
MARK3-212ENST00000558223 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
MARK3-212ENST00000558223 RAB3GAP2Q9H2M9 1393 aa10.23□□□□□ -0.77
MARK3-212ENST00000558223 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
MARK3-212ENST00000558223 GPR37O15354 613 aa10.22□□□□□ -0.77
MARK3-212ENST00000558223 TMC2Q8TDI7 906 aa10.22□□□□□ -0.77
MARK3-212ENST00000558223 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
MARK3-212ENST00000558223 POM121Q96HA1 1249 aa10.21□□□□□ -0.77
MARK3-212ENST00000558223 ZNF608Q9ULD9 1512 aaPredicted RBP10.21□□□□□ -0.78
MARK3-212ENST00000558223 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.78
MARK3-212ENST00000558223 SPDYE16A6NNV3 312 aaPredicted RBP10.2□□□□□ -0.78
MARK3-212ENST00000558223 NCOA2Q15596 1464 aa10.2□□□□□ -0.78
MARK3-212ENST00000558223 ARHGEF11O15085 1522 aa10.19□□□□□ -0.78
MARK3-212ENST00000558223 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
MARK3-212ENST00000558223 AKNAQ7Z591 1439 aa10.19□□□□□ -0.78
MARK3-212ENST00000558223 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
MARK3-212ENST00000558223 PUS7Q96PZ0 661 aaKnown RBP10.19□□□□□ -0.78
MARK3-212ENST00000558223 EIF4G3O43432 1585 aaKnown RBP10.18□□□□□ -0.78
MARK3-212ENST00000558223 TCOF1Q13428 1488 aaKnown RBP10.18□□□□□ -0.78
MARK3-212ENST00000558223 HFM1A2PYH4 1435 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms