RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
RDH11-210ENST00000557331 JCADQ9P266 1359 aa15.88■□□□□ 0.13
RDH11-210ENST00000557331 TBX22Q9Y458 520 aa15.88■□□□□ 0.13
RDH11-210ENST00000557331 ADGRB3O60242 1522 aa15.88■□□□□ 0.13
RDH11-210ENST00000557331 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
RDH11-210ENST00000557331 POTEAQ6S8J7 498 aa15.87■□□□□ 0.13
RDH11-210ENST00000557331 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
RDH11-210ENST00000557331 PLEKHG1Q9ULL1 1385 aa15.87■□□□□ 0.13
RDH11-210ENST00000557331 ROBO1Q9Y6N7 1651 aa15.86■□□□□ 0.13
RDH11-210ENST00000557331 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
RDH11-210ENST00000557331 ADGRL2O95490 1459 aa15.84■□□□□ 0.13
RDH11-210ENST00000557331 CADPS2Q86UW7 1296 aa15.84■□□□□ 0.13
RDH11-210ENST00000557331 SPATA31A6Q5VVP1 1343 aa15.84■□□□□ 0.13
RDH11-210ENST00000557331 PIK3R4Q99570 1358 aa15.84■□□□□ 0.13
RDH11-210ENST00000557331 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
RDH11-210ENST00000557331 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
RDH11-210ENST00000557331 C19orf44Q9H6X5 657 aa15.83■□□□□ 0.12
RDH11-210ENST00000557331 ZFYVE9O95405 1425 aa15.82■□□□□ 0.12
RDH11-210ENST00000557331 ATF3P18847 181 aa15.81■□□□□ 0.12
RDH11-210ENST00000557331 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
RDH11-210ENST00000557331 RIMS2Q9UQ26 1411 aa15.81■□□□□ 0.12
RDH11-210ENST00000557331 RBM33Q96EV2 1170 aaKnown RBP15.79■□□□□ 0.12
RDH11-210ENST00000557331 CHD2O14647 1828 aaKnown RBP15.79■□□□□ 0.12
RDH11-210ENST00000557331 PHLPP1O60346 1717 aa15.78■□□□□ 0.12
RDH11-210ENST00000557331 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
RDH11-210ENST00000557331 MEX3CQ5U5Q3 659 aaKnown RBP15.77■□□□□ 0.12
RDH11-210ENST00000557331 DIP2AQ14689 1571 aa15.76■□□□□ 0.11
RDH11-210ENST00000557331 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
RDH11-210ENST00000557331 TMEM131LA2VDJ0 1609 aa15.74■□□□□ 0.11
RDH11-210ENST00000557331 ROCK1Q13464 1354 aa15.73■□□□□ 0.11
RDH11-210ENST00000557331 DCCP43146 1447 aa15.72■□□□□ 0.11
RDH11-210ENST00000557331 GCC2Q8IWJ2 1684 aa15.72■□□□□ 0.11
RDH11-210ENST00000557331 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
RDH11-210ENST00000557331 RXRBP28702 533 aa15.71■□□□□ 0.11
RDH11-210ENST00000557331 AMOTL2Q9Y2J4 779 aa15.71■□□□□ 0.11
RDH11-210ENST00000557331 AHDC1Q5TGY3 1603 aaPredicted RBP15.71■□□□□ 0.11
RDH11-210ENST00000557331 ADAMTS13Q76LX8 1427 aa15.7■□□□□ 0.1
RDH11-210ENST00000557331 TRPM2O94759 1503 aa15.69■□□□□ 0.1
RDH11-210ENST00000557331 LRRC59Q96AG4 307 aaKnown RBP15.69■□□□□ 0.1
RDH11-210ENST00000557331 UNC13BO14795 1591 aa15.68■□□□□ 0.1
RDH11-210ENST00000557331 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
RDH11-210ENST00000557331 UPF1Q92900 1129 aaKnown RBP eCLIP15.68■□□□□ 0.1
RDH11-210ENST00000557331 MYO5BQ9ULV0 1848 aa15.68■□□□□ 0.1
RDH11-210ENST00000557331 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
RDH11-210ENST00000557331 BRINP3Q76B58 766 aa15.67■□□□□ 0.1
RDH11-210ENST00000557331 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
RDH11-210ENST00000557331 NUP155O75694 1391 aa15.66■□□□□ 0.1
RDH11-210ENST00000557331 SETD5Q9C0A6 1442 aa15.65■□□□□ 0.1
RDH11-210ENST00000557331 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
RDH11-210ENST00000557331 TRIM52Q96A61 297 aa15.64■□□□□ 0.09
RDH11-210ENST00000557331 LRP6O75581 1613 aa15.64■□□□□ 0.09
RDH11-210ENST00000557331 FOXD1Q16676 465 aa15.63■□□□□ 0.09
RDH11-210ENST00000557331 IQGAP3Q86VI3 1631 aa15.63■□□□□ 0.09
RDH11-210ENST00000557331 E9PCH4 1651 aa15.63■□□□□ 0.09
RDH11-210ENST00000557331 NUTM2BA6NNL0 878 aaPredicted RBP15.61■□□□□ 0.09
RDH11-210ENST00000557331 NUTM2EB1AL46 878 aaPredicted RBP15.61■□□□□ 0.09
RDH11-210ENST00000557331 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
RDH11-210ENST00000557331 ZNF326Q5BKZ1 582 aaKnown RBP15.61■□□□□ 0.09
RDH11-210ENST00000557331 NUTM2AQ8IVF1 878 aaPredicted RBP15.61■□□□□ 0.09
RDH11-210ENST00000557331 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
RDH11-210ENST00000557331 SETBP1Q9Y6X0 1596 aa15.6■□□□□ 0.09
RDH11-210ENST00000557331 AFF2P51816 1311 aa15.6■□□□□ 0.09
RDH11-210ENST00000557331 SETD1AO15047 1707 aaKnown RBP15.6■□□□□ 0.09
RDH11-210ENST00000557331 PTPRUQ92729 1446 aa15.59■□□□□ 0.09
RDH11-210ENST00000557331 ASXL1Q8IXJ9 1541 aa15.58■□□□□ 0.09
RDH11-210ENST00000557331 MST1RQ04912 1400 aa15.58■□□□□ 0.08
RDH11-210ENST00000557331 QTRT2Q9H974 415 aaKnown RBP15.57■□□□□ 0.08
RDH11-210ENST00000557331 ADGRL3Q9HAR2 1447 aa15.56■□□□□ 0.08
RDH11-210ENST00000557331 SRCAPQ6ZRS2 3230 aa15.56■□□□□ 0.08
RDH11-210ENST00000557331 XRN1Q8IZH2 1706 aaKnown RBP15.55■□□□□ 0.08
RDH11-210ENST00000557331 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
RDH11-210ENST00000557331 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
RDH11-210ENST00000557331 NHSL1Q5SYE7 1610 aa15.54■□□□□ 0.08
RDH11-210ENST00000557331 METP08581 1390 aa15.53■□□□□ 0.08
RDH11-210ENST00000557331 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.08
RDH11-210ENST00000557331 RPGRIP1LQ68CZ1 1315 aa15.51■□□□□ 0.07
RDH11-210ENST00000557331 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
RDH11-210ENST00000557331 TRPC5Q9UL62 973 aaPredicted RBP15.5■□□□□ 0.07
RDH11-210ENST00000557331 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
RDH11-210ENST00000557331 PTCH1Q13635 1447 aa15.5■□□□□ 0.07
RDH11-210ENST00000557331 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
RDH11-210ENST00000557331 SOS2Q07890 1332 aaPredicted RBP15.49■□□□□ 0.07
RDH11-210ENST00000557331 ITGAEP38570 1179 aa15.49■□□□□ 0.07
RDH11-210ENST00000557331 CCDC125Q86Z20 511 aa15.49■□□□□ 0.07
RDH11-210ENST00000557331 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
RDH11-210ENST00000557331 FNBP4Q8N3X1 1017 aaPredicted RBP15.48■□□□□ 0.07
RDH11-210ENST00000557331 ADAMTS2O95450 1211 aa15.47■□□□□ 0.07
RDH11-210ENST00000557331 PRAG1Q86YV5 1406 aa15.47■□□□□ 0.07
RDH11-210ENST00000557331 USP21Q9UK80 565 aa15.47■□□□□ 0.07
RDH11-210ENST00000557331 LAMC1P11047 1609 aa15.46■□□□□ 0.07
RDH11-210ENST00000557331 HFM1A2PYH4 1435 aa15.46■□□□□ 0.07
RDH11-210ENST00000557331 RGS12O14924 1447 aa15.46■□□□□ 0.07
RDH11-210ENST00000557331 NEXMIFQ5QGS0 1516 aa15.45■□□□□ 0.06
RDH11-210ENST00000557331 NPHP3Q7Z494 1330 aa15.44■□□□□ 0.06
RDH11-210ENST00000557331 KIF1BO60333 1816 aa15.44■□□□□ 0.06
RDH11-210ENST00000557331 LRPPRCP42704 1394 aaKnown RBP15.44■□□□□ 0.06
RDH11-210ENST00000557331 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
RDH11-210ENST00000557331 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
RDH11-210ENST00000557331 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
RDH11-210ENST00000557331 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms