RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 RPGRIP1LQ68CZ1 1315 aa23.92■■□□□ 1.42
PCNX4-213ENST00000556907 NCKAP5LQ9HCH0 1330 aa23.92■■□□□ 1.42
PCNX4-213ENST00000556907 MED14O60244 1454 aa23.92■■□□□ 1.42
PCNX4-213ENST00000556907 SCAF11Q99590 1463 aaKnown RBP23.92■■□□□ 1.42
PCNX4-213ENST00000556907 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
PCNX4-213ENST00000556907 ZFYVE9O95405 1425 aa23.9■■□□□ 1.42
PCNX4-213ENST00000556907 RIMS2Q9UQ26 1411 aa23.9■■□□□ 1.42
PCNX4-213ENST00000556907 LTKP29376 864 aa23.88■■□□□ 1.41
PCNX4-213ENST00000556907 SPATA31E1Q6ZUB1 1445 aa23.87■■□□□ 1.41
PCNX4-213ENST00000556907 NPHP4O75161 1426 aaPredicted RBP23.86■■□□□ 1.41
PCNX4-213ENST00000556907 PPP1R15AO75807 674 aaPredicted RBP23.85■■□□□ 1.41
PCNX4-213ENST00000556907 VGFO15240 615 aaPredicted RBP23.83■■□□□ 1.41
PCNX4-213ENST00000556907 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
PCNX4-213ENST00000556907 STAC3Q96MF2 364 aa23.82■■□□□ 1.4
PCNX4-213ENST00000556907 IQGAP1P46940 1657 aa23.82■■□□□ 1.4
PCNX4-213ENST00000556907 NEXMIFQ5QGS0 1516 aa23.81■■□□□ 1.4
PCNX4-213ENST00000556907 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
PCNX4-213ENST00000556907 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
PCNX4-213ENST00000556907 PPLO60437 1756 aa23.77■■□□□ 1.4
PCNX4-213ENST00000556907 BCANQ96GW7 911 aa23.75■■□□□ 1.39
PCNX4-213ENST00000556907 TBX22Q9Y458 520 aa23.74■■□□□ 1.39
PCNX4-213ENST00000556907 NUTM2DQ5VT03 806 aaPredicted RBP23.73■■□□□ 1.39
PCNX4-213ENST00000556907 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
PCNX4-213ENST00000556907 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
PCNX4-213ENST00000556907 SETBP1Q9Y6X0 1596 aa23.71■■□□□ 1.39
PCNX4-213ENST00000556907 MYOM2P54296 1465 aa23.7■■□□□ 1.38
PCNX4-213ENST00000556907 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
PCNX4-213ENST00000556907 PIK3R4Q99570 1358 aa23.68■■□□□ 1.38
PCNX4-213ENST00000556907 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
PCNX4-213ENST00000556907 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
PCNX4-213ENST00000556907 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
PCNX4-213ENST00000556907 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
PCNX4-213ENST00000556907 ADGRF5Q8IZF2 1346 aa23.65■■□□□ 1.38
PCNX4-213ENST00000556907 NRXN1Q9ULB1 1477 aa23.65■■□□□ 1.38
PCNX4-213ENST00000556907 NRXN3Q9Y4C0 1643 aa23.63■■□□□ 1.37
PCNX4-213ENST00000556907 PIK3C2GO75747 1445 aa23.62■■□□□ 1.37
PCNX4-213ENST00000556907 KCNA6P17658 529 aa23.62■■□□□ 1.37
PCNX4-213ENST00000556907 ZNF335Q9H4Z2 1342 aaPredicted RBP23.61■■□□□ 1.37
PCNX4-213ENST00000556907 CPS1P31327 1500 aa23.61■■□□□ 1.37
PCNX4-213ENST00000556907 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
PCNX4-213ENST00000556907 KDM2AQ9Y2K7 1162 aa23.6■■□□□ 1.37
PCNX4-213ENST00000556907 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
PCNX4-213ENST00000556907 L3MBTL2Q969R5 705 aa23.59■■□□□ 1.37
PCNX4-213ENST00000556907 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
PCNX4-213ENST00000556907 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
PCNX4-213ENST00000556907 LTBP4Q8N2S1 1624 aa23.58■■□□□ 1.36
PCNX4-213ENST00000556907 CHD2O14647 1828 aaKnown RBP23.57■■□□□ 1.36
PCNX4-213ENST00000556907 LAMC1P11047 1609 aa23.57■■□□□ 1.36
PCNX4-213ENST00000556907 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
PCNX4-213ENST00000556907 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
PCNX4-213ENST00000556907 SETD1AO15047 1707 aaKnown RBP23.54■■□□□ 1.36
PCNX4-213ENST00000556907 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
PCNX4-213ENST00000556907 METP08581 1390 aa23.53■■□□□ 1.36
PCNX4-213ENST00000556907 IQSEC2Q5JU85 1478 aa23.52■■□□□ 1.36
PCNX4-213ENST00000556907 AMOTL2Q9Y2J4 779 aa23.52■■□□□ 1.36
PCNX4-213ENST00000556907 PRAG1Q86YV5 1406 aa23.5■■□□□ 1.35
PCNX4-213ENST00000556907 STRCP1A6NGW2 1772 aa23.5■■□□□ 1.35
PCNX4-213ENST00000556907 CFAP70Q5T0N1 1121 aa23.5■■□□□ 1.35
PCNX4-213ENST00000556907 CERKQ8TCT0 537 aa23.5■■□□□ 1.35
PCNX4-213ENST00000556907 KIAA1210Q9ULL0 1709 aa23.49■■□□□ 1.35
PCNX4-213ENST00000556907 PTPRUQ92729 1446 aa23.49■■□□□ 1.35
PCNX4-213ENST00000556907 NCOA3Q9Y6Q9 1424 aa23.48■■□□□ 1.35
PCNX4-213ENST00000556907 PROSER2Q86WR7 435 aaPredicted RBP23.47■■□□□ 1.35
PCNX4-213ENST00000556907 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
PCNX4-213ENST00000556907 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
PCNX4-213ENST00000556907 LRRC7Q96NW7 1537 aa23.46■■□□□ 1.35
PCNX4-213ENST00000556907 ABCC11Q96J66 1382 aa23.45■■□□□ 1.34
PCNX4-213ENST00000556907 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
PCNX4-213ENST00000556907 TECPR2O15040 1411 aa23.43■■□□□ 1.34
PCNX4-213ENST00000556907 PTCH1Q13635 1447 aa23.43■■□□□ 1.34
PCNX4-213ENST00000556907 YTHDC2Q9H6S0 1430 aaKnown RBP23.43■■□□□ 1.34
PCNX4-213ENST00000556907 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
PCNX4-213ENST00000556907 TRPM1Q7Z4N2 1603 aa23.43■■□□□ 1.34
PCNX4-213ENST00000556907 ASXL1Q8IXJ9 1541 aa23.42■■□□□ 1.34
PCNX4-213ENST00000556907 ADGRB1O14514 1584 aa23.41■■□□□ 1.34
PCNX4-213ENST00000556907 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
PCNX4-213ENST00000556907 KNDC1Q76NI1 1749 aa23.4■■□□□ 1.34
PCNX4-213ENST00000556907 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
PCNX4-213ENST00000556907 STK26Q9P289 416 aa23.37■■□□□ 1.33
PCNX4-213ENST00000556907 DLC1Q96QB1 1528 aa23.36■■□□□ 1.33
PCNX4-213ENST00000556907 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
PCNX4-213ENST00000556907 ROBO2Q9HCK4 1378 aa23.35■■□□□ 1.33
PCNX4-213ENST00000556907 XIRP1Q702N8 1843 aaKnown RBP23.34■■□□□ 1.33
PCNX4-213ENST00000556907 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
PCNX4-213ENST00000556907 C19orf44Q9H6X5 657 aa23.34■■□□□ 1.33
PCNX4-213ENST00000556907 MSH6P52701 1360 aa23.34■■□□□ 1.33
PCNX4-213ENST00000556907 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
PCNX4-213ENST00000556907 ROCK2O75116 1388 aaKnown RBP23.32■■□□□ 1.32
PCNX4-213ENST00000556907 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
PCNX4-213ENST00000556907 TOM1O60784 492 aa23.32■■□□□ 1.32
PCNX4-213ENST00000556907 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
PCNX4-213ENST00000556907 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
PCNX4-213ENST00000556907 DCCP43146 1447 aa23.29■■□□□ 1.32
PCNX4-213ENST00000556907 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
PCNX4-213ENST00000556907 CADPS2Q86UW7 1296 aa23.28■■□□□ 1.32
PCNX4-213ENST00000556907 RBM33Q96EV2 1170 aaKnown RBP23.28■■□□□ 1.32
PCNX4-213ENST00000556907 POGKQ9P215 609 aa23.28■■□□□ 1.32
PCNX4-213ENST00000556907 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
PCNX4-213ENST00000556907 PRAM1Q96QH2 718 aa23.27■■□□□ 1.32
PCNX4-213ENST00000556907 ATF3P18847 181 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms