RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 HDGFP51858 240 aaKnown RBP36.28■■■■□ 3.4
SDR39U1-221ENST00000556707 CCDC144AA2RUR9 1427 aa36.25■■■■□ 3.39
SDR39U1-221ENST00000556707 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.25■■■■□ 3.39
SDR39U1-221ENST00000556707 ZNF326Q5BKZ1 582 aaKnown RBP36.21■■■■□ 3.39
SDR39U1-221ENST00000556707 LTBP4Q8N2S1 1624 aa36.21■■■■□ 3.39
SDR39U1-221ENST00000556707 ZNF335Q9H4Z2 1342 aaPredicted RBP36.21■■■■□ 3.39
SDR39U1-221ENST00000556707 PPP1R15AO75807 674 aaPredicted RBP36.2■■■■□ 3.39
SDR39U1-221ENST00000556707 PLEKHG1Q9ULL1 1385 aa36.18■■■■□ 3.38
SDR39U1-221ENST00000556707 NUTM2DQ5VT03 806 aaPredicted RBP36.16■■■■□ 3.38
SDR39U1-221ENST00000556707 ANKRD30BQ9BXX2 1392 aa36.15■■■■□ 3.38
SDR39U1-221ENST00000556707 NEXMIFQ5QGS0 1516 aa36.15■■■■□ 3.38
SDR39U1-221ENST00000556707 SPATA31E1Q6ZUB1 1445 aa36.11■■■■□ 3.37
SDR39U1-221ENST00000556707 CERKQ8TCT0 537 aa36.11■■■■□ 3.37
SDR39U1-221ENST00000556707 BCANQ96GW7 911 aa36.11■■■■□ 3.37
SDR39U1-221ENST00000556707 PPLO60437 1756 aa36.1■■■■□ 3.37
SDR39U1-221ENST00000556707 RPGRIP1LQ68CZ1 1315 aa36.08■■■■□ 3.37
SDR39U1-221ENST00000556707 STRCP1A6NGW2 1772 aa36.08■■■■□ 3.37
SDR39U1-221ENST00000556707 SLC26A8Q96RN1 970 aa36.08■■■■□ 3.37
SDR39U1-221ENST00000556707 SENP3Q9H4L4 574 aaPredicted RBP36.07■■■■□ 3.36
SDR39U1-221ENST00000556707 CPS1P31327 1500 aa36.04■■■■□ 3.36
SDR39U1-221ENST00000556707 DIP2AQ14689 1571 aa36.02■■■■□ 3.36
SDR39U1-221ENST00000556707 ADAMTS13Q76LX8 1427 aa36.02■■■■□ 3.36
SDR39U1-221ENST00000556707 RGL3Q3MIN7 710 aa36.02■■■■□ 3.36
SDR39U1-221ENST00000556707 SETBP1Q9Y6X0 1596 aa36.02■■■■□ 3.36
SDR39U1-221ENST00000556707 IFT172Q9UG01 1749 aa36.01■■■■□ 3.36
SDR39U1-221ENST00000556707 NRXN3Q9Y4C0 1643 aa36.01■■■■□ 3.35
SDR39U1-221ENST00000556707 VGFO15240 615 aaPredicted RBP36■■■■□ 3.35
SDR39U1-221ENST00000556707 TBX22Q9Y458 520 aa36■■■■□ 3.35
SDR39U1-221ENST00000556707 CHD2O14647 1828 aaKnown RBP35.97■■■■□ 3.35
SDR39U1-221ENST00000556707 IQSEC2Q5JU85 1478 aa35.97■■■■□ 3.35
SDR39U1-221ENST00000556707 KCNA6P17658 529 aa35.93■■■■□ 3.34
SDR39U1-221ENST00000556707 NWD1Q149M9 1564 aa35.92■■■■□ 3.34
SDR39U1-221ENST00000556707 PIK3R4Q99570 1358 aa35.89■■■■□ 3.34
SDR39U1-221ENST00000556707 DHX57Q6P158 1386 aaKnown RBP35.89■■■■□ 3.34
SDR39U1-221ENST00000556707 LRRC7Q96NW7 1537 aa35.88■■■■□ 3.33
SDR39U1-221ENST00000556707 ADGRF5Q8IZF2 1346 aa35.85■■■■□ 3.33
SDR39U1-221ENST00000556707 PCGF6Q9BYE7 350 aa35.85■■■■□ 3.33
SDR39U1-221ENST00000556707 SETD1AO15047 1707 aaKnown RBP35.84■■■■□ 3.33
SDR39U1-221ENST00000556707 NKTRP30414 1462 aaKnown RBP35.84■■■■□ 3.33
SDR39U1-221ENST00000556707 FBXO41Q8TF61 875 aa35.83■■■■□ 3.33
SDR39U1-221ENST00000556707 XIRP1Q702N8 1843 aaKnown RBP35.83■■■■□ 3.33
SDR39U1-221ENST00000556707 ALKQ9UM73 1620 aa35.83■■■■□ 3.33
SDR39U1-221ENST00000556707 MYOM2P54296 1465 aa35.8■■■■□ 3.32
SDR39U1-221ENST00000556707 METP08581 1390 aa35.79■■■■□ 3.32
SDR39U1-221ENST00000556707 PTPRUQ92729 1446 aa35.78■■■■□ 3.32
SDR39U1-221ENST00000556707 PIK3C2GO75747 1445 aa35.76■■■■□ 3.32
SDR39U1-221ENST00000556707 NRXN1Q9ULB1 1477 aa35.76■■■■□ 3.32
SDR39U1-221ENST00000556707 PROSER2Q86WR7 435 aaPredicted RBP35.76■■■■□ 3.32
SDR39U1-221ENST00000556707 XRN1Q8IZH2 1706 aaKnown RBP35.76■■■■□ 3.31
SDR39U1-221ENST00000556707 AMOTL2Q9Y2J4 779 aa35.74■■■■□ 3.31
SDR39U1-221ENST00000556707 TMEM94Q12767 1356 aa35.72■■■■□ 3.31
SDR39U1-221ENST00000556707 ILDR1Q86SU0 546 aaPredicted RBP35.71■■■■□ 3.31
SDR39U1-221ENST00000556707 DCAF11Q8TEB1 546 aa35.71■■■■□ 3.31
SDR39U1-221ENST00000556707 STAC3Q96MF2 364 aa35.7■■■■□ 3.31
SDR39U1-221ENST00000556707 SIN3AQ96ST3 1273 aa35.68■■■■□ 3.3
SDR39U1-221ENST00000556707 UBAP1LF5GYI3 381 aa35.67■■■■□ 3.3
SDR39U1-221ENST00000556707 KDM2AQ9Y2K7 1162 aa35.67■■■■□ 3.3
SDR39U1-221ENST00000556707 LAMC1P11047 1609 aa35.66■■■■□ 3.3
SDR39U1-221ENST00000556707 RBM33Q96EV2 1170 aaKnown RBP35.65■■■■□ 3.3
SDR39U1-221ENST00000556707 C14orf93Q9H972 538 aaKnown RBP35.63■■■■□ 3.29
SDR39U1-221ENST00000556707 NCOA3Q9Y6Q9 1424 aa35.62■■■■□ 3.29
SDR39U1-221ENST00000556707 TOM1O60784 492 aa35.6■■■■□ 3.29
SDR39U1-221ENST00000556707 NEUROD1Q13562 356 aa35.6■■■■□ 3.29
SDR39U1-221ENST00000556707 ASXL1Q8IXJ9 1541 aa35.6■■■■□ 3.29
SDR39U1-221ENST00000556707 CFAP70Q5T0N1 1121 aa35.59■■■■□ 3.29
SDR39U1-221ENST00000556707 PRAG1Q86YV5 1406 aa35.58■■■■□ 3.29
SDR39U1-221ENST00000556707 PTCH1Q13635 1447 aa35.57■■■■□ 3.28
SDR39U1-221ENST00000556707 TMEM132EQ6IEE7 984 aa35.55■■■■□ 3.28
SDR39U1-221ENST00000556707 MSH6P52701 1360 aa35.54■■■■□ 3.28
SDR39U1-221ENST00000556707 LRPPRCP42704 1394 aaKnown RBP35.53■■■■□ 3.28
SDR39U1-221ENST00000556707 L3MBTL2Q969R5 705 aa35.53■■■■□ 3.28
SDR39U1-221ENST00000556707 KNDC1Q76NI1 1749 aa35.52■■■■□ 3.28
SDR39U1-221ENST00000556707 ROBO2Q9HCK4 1378 aa35.51■■■■□ 3.28
SDR39U1-221ENST00000556707 C14orf37Q86TY3 774 aa35.51■■■■□ 3.28
SDR39U1-221ENST00000556707 YTHDC2Q9H6S0 1430 aaKnown RBP35.5■■■■□ 3.27
SDR39U1-221ENST00000556707 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.5■■■■□ 3.27
SDR39U1-221ENST00000556707 TECPR2O15040 1411 aa35.49■■■■□ 3.27
SDR39U1-221ENST00000556707 ABCC11Q96J66 1382 aa35.49■■■■□ 3.27
SDR39U1-221ENST00000556707 STK26Q9P289 416 aa35.48■■■■□ 3.27
SDR39U1-221ENST00000556707 C19orf44Q9H6X5 657 aa35.47■■■■□ 3.27
SDR39U1-221ENST00000556707 ADGRB1O14514 1584 aa35.47■■■■□ 3.27
SDR39U1-221ENST00000556707 KIAA1210Q9ULL0 1709 aa35.46■■■■□ 3.27
SDR39U1-221ENST00000556707 PIP4K2BP78356 416 aa35.45■■■■□ 3.27
SDR39U1-221ENST00000556707 NALCNQ8IZF0 1738 aa35.44■■■■□ 3.26
SDR39U1-221ENST00000556707 SCAF1Q9H7N4 1312 aaKnown RBP35.43■■■■□ 3.26
SDR39U1-221ENST00000556707 ADGRL3Q9HAR2 1447 aa35.42■■■■□ 3.26
SDR39U1-221ENST00000556707 DCCP43146 1447 aa35.4■■■■□ 3.26
SDR39U1-221ENST00000556707 ATF3P18847 181 aa35.38■■■■□ 3.25
SDR39U1-221ENST00000556707 CADPS2Q86UW7 1296 aa35.38■■■■□ 3.25
SDR39U1-221ENST00000556707 TONSLQ96HA7 1378 aa35.38■■■■□ 3.25
SDR39U1-221ENST00000556707 CLSPNQ9HAW4 1339 aa35.37■■■■□ 3.25
SDR39U1-221ENST00000556707 SIRT1Q96EB6 747 aa35.37■■■■□ 3.25
SDR39U1-221ENST00000556707 FAM135BQ49AJ0 1406 aa35.36■■■■□ 3.25
SDR39U1-221ENST00000556707 DLC1Q96QB1 1528 aa35.35■■■■□ 3.25
SDR39U1-221ENST00000556707 WAPLQ7Z5K2 1190 aa35.34■■■■□ 3.25
SDR39U1-221ENST00000556707 SLAIN2Q9P270 581 aa35.34■■■■□ 3.25
SDR39U1-221ENST00000556707 PLEKHH1Q9ULM0 1364 aa35.32■■■■□ 3.24
SDR39U1-221ENST00000556707 ROBO1Q9Y6N7 1651 aa35.3■■■■□ 3.24
SDR39U1-221ENST00000556707 TRPM1Q7Z4N2 1603 aa35.28■■■■□ 3.24
SDR39U1-221ENST00000556707 NBPF1Q3BBV0 1214 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms