RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
SLIRP-206ENST00000556375 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
SLIRP-206ENST00000556375 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
SLIRP-206ENST00000556375 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
SLIRP-206ENST00000556375 RAB3GAP2Q9H2M9 1393 aa17.21■□□□□ 0.35
SLIRP-206ENST00000556375 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
SLIRP-206ENST00000556375 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
SLIRP-206ENST00000556375 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
SLIRP-206ENST00000556375 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
SLIRP-206ENST00000556375 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
SLIRP-206ENST00000556375 NEXMIFQ5QGS0 1516 aa17.18■□□□□ 0.34
SLIRP-206ENST00000556375 LRRC7Q96NW7 1537 aa17.17■□□□□ 0.34
SLIRP-206ENST00000556375 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
SLIRP-206ENST00000556375 CHD2O14647 1828 aaKnown RBP17.16■□□□□ 0.34
SLIRP-206ENST00000556375 XIRP1Q702N8 1843 aaKnown RBP17.16■□□□□ 0.34
SLIRP-206ENST00000556375 SETBP1Q9Y6X0 1596 aa17.15■□□□□ 0.34
SLIRP-206ENST00000556375 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
SLIRP-206ENST00000556375 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
SLIRP-206ENST00000556375 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
SLIRP-206ENST00000556375 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
SLIRP-206ENST00000556375 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
SLIRP-206ENST00000556375 PPLO60437 1756 aa17.13■□□□□ 0.33
SLIRP-206ENST00000556375 FOXD1Q16676 465 aa17.13■□□□□ 0.33
SLIRP-206ENST00000556375 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
SLIRP-206ENST00000556375 BCANQ96GW7 911 aa17.12■□□□□ 0.33
SLIRP-206ENST00000556375 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
SLIRP-206ENST00000556375 IFT172Q9UG01 1749 aa17.1■□□□□ 0.33
SLIRP-206ENST00000556375 KCNA6P17658 529 aa17.1■□□□□ 0.33
SLIRP-206ENST00000556375 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
SLIRP-206ENST00000556375 HRCP23327 699 aa17.09■□□□□ 0.33
SLIRP-206ENST00000556375 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
SLIRP-206ENST00000556375 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
SLIRP-206ENST00000556375 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
SLIRP-206ENST00000556375 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
SLIRP-206ENST00000556375 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
SLIRP-206ENST00000556375 SETD1AO15047 1707 aaKnown RBP17.07■□□□□ 0.32
SLIRP-206ENST00000556375 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
SLIRP-206ENST00000556375 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
SLIRP-206ENST00000556375 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
SLIRP-206ENST00000556375 TOM1O60784 492 aa17.04■□□□□ 0.32
SLIRP-206ENST00000556375 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
SLIRP-206ENST00000556375 PTPRUQ92729 1446 aa17.02■□□□□ 0.31
SLIRP-206ENST00000556375 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
SLIRP-206ENST00000556375 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
SLIRP-206ENST00000556375 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
SLIRP-206ENST00000556375 METP08581 1390 aa16.99■□□□□ 0.31
SLIRP-206ENST00000556375 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
SLIRP-206ENST00000556375 PIP4K2BP78356 416 aa16.97■□□□□ 0.31
SLIRP-206ENST00000556375 MSH6P52701 1360 aa16.97■□□□□ 0.31
SLIRP-206ENST00000556375 MYOM2P54296 1465 aa16.97■□□□□ 0.31
SLIRP-206ENST00000556375 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
SLIRP-206ENST00000556375 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
SLIRP-206ENST00000556375 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
SLIRP-206ENST00000556375 PIK3C2GO75747 1445 aa16.96■□□□□ 0.3
SLIRP-206ENST00000556375 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
SLIRP-206ENST00000556375 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.95■□□□□ 0.3
SLIRP-206ENST00000556375 LAMC1P11047 1609 aa16.95■□□□□ 0.3
SLIRP-206ENST00000556375 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
SLIRP-206ENST00000556375 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
SLIRP-206ENST00000556375 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
SLIRP-206ENST00000556375 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
SLIRP-206ENST00000556375 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
SLIRP-206ENST00000556375 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
SLIRP-206ENST00000556375 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
SLIRP-206ENST00000556375 DCCP43146 1447 aa16.91■□□□□ 0.3
SLIRP-206ENST00000556375 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
SLIRP-206ENST00000556375 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
SLIRP-206ENST00000556375 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
SLIRP-206ENST00000556375 HSPA1LP34931 641 aa16.88■□□□□ 0.29
SLIRP-206ENST00000556375 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
SLIRP-206ENST00000556375 TECPR2O15040 1411 aa16.87■□□□□ 0.29
SLIRP-206ENST00000556375 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
SLIRP-206ENST00000556375 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
SLIRP-206ENST00000556375 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
SLIRP-206ENST00000556375 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
SLIRP-206ENST00000556375 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
SLIRP-206ENST00000556375 ATF3P18847 181 aa16.83■□□□□ 0.28
SLIRP-206ENST00000556375 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
SLIRP-206ENST00000556375 YTHDC2Q9H6S0 1430 aaKnown RBP16.82■□□□□ 0.28
SLIRP-206ENST00000556375 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
SLIRP-206ENST00000556375 STAC3Q96MF2 364 aa16.82■□□□□ 0.28
SLIRP-206ENST00000556375 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
SLIRP-206ENST00000556375 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
SLIRP-206ENST00000556375 CDC42BPGQ6DT37 1551 aa16.81■□□□□ 0.28
SLIRP-206ENST00000556375 MST1RQ04912 1400 aa16.81■□□□□ 0.28
SLIRP-206ENST00000556375 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
SLIRP-206ENST00000556375 AHDC1Q5TGY3 1603 aaPredicted RBP16.8■□□□□ 0.28
SLIRP-206ENST00000556375 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
SLIRP-206ENST00000556375 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
SLIRP-206ENST00000556375 KIAA1210Q9ULL0 1709 aa16.79■□□□□ 0.28
SLIRP-206ENST00000556375 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-206ENST00000556375 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
SLIRP-206ENST00000556375 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
SLIRP-206ENST00000556375 DLC1Q96QB1 1528 aa16.78■□□□□ 0.28
SLIRP-206ENST00000556375 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
SLIRP-206ENST00000556375 STK26Q9P289 416 aa16.77■□□□□ 0.28
SLIRP-206ENST00000556375 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
SLIRP-206ENST00000556375 FMN2Q9NZ56 1722 aa16.74■□□□□ 0.27
SLIRP-206ENST00000556375 BRINP3Q76B58 766 aa16.74■□□□□ 0.27
SLIRP-206ENST00000556375 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms