RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 ADGRB3O60242 1522 aa24.79■■□□□ 1.56
SDR39U1-217ENST00000556249 LMTK2Q8IWU2 1503 aa24.79■■□□□ 1.56
SDR39U1-217ENST00000556249 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
SDR39U1-217ENST00000556249 LRP6O75581 1613 aa24.76■■□□□ 1.55
SDR39U1-217ENST00000556249 MEX3CQ5U5Q3 659 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-217ENST00000556249 UPF1Q92900 1129 aaKnown RBP eCLIP24.75■■□□□ 1.55
SDR39U1-217ENST00000556249 SLC52A1Q9NWF4 448 aa24.75■■□□□ 1.55
SDR39U1-217ENST00000556249 ANKRD30AQ9BXX3 1397 aa24.74■■□□□ 1.55
SDR39U1-217ENST00000556249 COL16A1Q07092 1604 aaPredicted RBP24.74■■□□□ 1.55
SDR39U1-217ENST00000556249 PPP1R15AO75807 674 aaPredicted RBP24.73■■□□□ 1.55
SDR39U1-217ENST00000556249 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
SDR39U1-217ENST00000556249 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
SDR39U1-217ENST00000556249 ZFYVE9O95405 1425 aa24.7■■□□□ 1.55
SDR39U1-217ENST00000556249 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.55
SDR39U1-217ENST00000556249 PLEKHG1Q9ULL1 1385 aa24.7■■□□□ 1.55
SDR39U1-217ENST00000556249 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
SDR39U1-217ENST00000556249 MYO5BQ9ULV0 1848 aa24.69■■□□□ 1.54
SDR39U1-217ENST00000556249 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
SDR39U1-217ENST00000556249 ZNF772Q68DY9 489 aaPredicted RBP24.68■■□□□ 1.54
SDR39U1-217ENST00000556249 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
SDR39U1-217ENST00000556249 CHGAP10645 457 aaKnown RBP24.67■■□□□ 1.54
SDR39U1-217ENST00000556249 NUTM2BA6NNL0 878 aaPredicted RBP24.65■■□□□ 1.54
SDR39U1-217ENST00000556249 NUTM2EB1AL46 878 aaPredicted RBP24.65■■□□□ 1.54
SDR39U1-217ENST00000556249 NUTM2AQ8IVF1 878 aaPredicted RBP24.65■■□□□ 1.54
SDR39U1-217ENST00000556249 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
SDR39U1-217ENST00000556249 APLP2Q06481 763 aa24.64■■□□□ 1.54
SDR39U1-217ENST00000556249 GCC2Q8IWJ2 1684 aa24.64■■□□□ 1.53
SDR39U1-217ENST00000556249 HDGFP51858 240 aaKnown RBP24.63■■□□□ 1.53
SDR39U1-217ENST00000556249 ATF3P18847 181 aa24.62■■□□□ 1.53
SDR39U1-217ENST00000556249 RXRBP28702 533 aa24.62■■□□□ 1.53
SDR39U1-217ENST00000556249 CADPS2Q86UW7 1296 aa24.62■■□□□ 1.53
SDR39U1-217ENST00000556249 C19orf44Q9H6X5 657 aa24.61■■□□□ 1.53
SDR39U1-217ENST00000556249 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.61■■□□□ 1.53
SDR39U1-217ENST00000556249 TMEM131LA2VDJ0 1609 aa24.61■■□□□ 1.53
SDR39U1-217ENST00000556249 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
SDR39U1-217ENST00000556249 RPRD2Q5VT52 1461 aaKnown RBP24.59■■□□□ 1.53
SDR39U1-217ENST00000556249 NCOA3Q9Y6Q9 1424 aa24.59■■□□□ 1.53
SDR39U1-217ENST00000556249 AHDC1Q5TGY3 1603 aaPredicted RBP24.58■■□□□ 1.53
SDR39U1-217ENST00000556249 BRINP3Q76B58 766 aa24.58■■□□□ 1.53
SDR39U1-217ENST00000556249 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
SDR39U1-217ENST00000556249 ANKRD50Q9ULJ7 1429 aa24.57■■□□□ 1.52
SDR39U1-217ENST00000556249 SHPRHQ149N8 1683 aa24.56■■□□□ 1.52
SDR39U1-217ENST00000556249 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.56■■□□□ 1.52
SDR39U1-217ENST00000556249 AMOTL2Q9Y2J4 779 aa24.55■■□□□ 1.52
SDR39U1-217ENST00000556249 ADGRL2O95490 1459 aa24.55■■□□□ 1.52
SDR39U1-217ENST00000556249 AFF2P51816 1311 aa24.54■■□□□ 1.52
SDR39U1-217ENST00000556249 DIP2AQ14689 1571 aa24.52■■□□□ 1.52
SDR39U1-217ENST00000556249 PTPRUQ92729 1446 aa24.52■■□□□ 1.52
SDR39U1-217ENST00000556249 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
SDR39U1-217ENST00000556249 PIK3R4Q99570 1358 aa24.48■■□□□ 1.51
SDR39U1-217ENST00000556249 C8orf37Q96NL8 207 aa24.47■■□□□ 1.51
SDR39U1-217ENST00000556249 CDK12Q9NYV4 1490 aaPredicted RBP24.45■■□□□ 1.51
SDR39U1-217ENST00000556249 E9PCH4 1651 aa24.45■■□□□ 1.5
SDR39U1-217ENST00000556249 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.5
SDR39U1-217ENST00000556249 TRPM2O94759 1503 aa24.44■■□□□ 1.5
SDR39U1-217ENST00000556249 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
SDR39U1-217ENST00000556249 RGS12O14924 1447 aa24.43■■□□□ 1.5
SDR39U1-217ENST00000556249 SETD5Q9C0A6 1442 aa24.42■■□□□ 1.5
SDR39U1-217ENST00000556249 LRRC59Q96AG4 307 aaKnown RBP24.41■■□□□ 1.5
SDR39U1-217ENST00000556249 MST1RQ04912 1400 aa24.41■■□□□ 1.5
SDR39U1-217ENST00000556249 UNC13BO14795 1591 aa24.41■■□□□ 1.5
SDR39U1-217ENST00000556249 RBM6P78332 1123 aaKnown RBP24.39■■□□□ 1.49
SDR39U1-217ENST00000556249 ADAMTS2O95450 1211 aa24.38■■□□□ 1.49
SDR39U1-217ENST00000556249 DCCP43146 1447 aa24.37■■□□□ 1.49
SDR39U1-217ENST00000556249 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
SDR39U1-217ENST00000556249 METP08581 1390 aa24.36■■□□□ 1.49
SDR39U1-217ENST00000556249 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
SDR39U1-217ENST00000556249 XRN1Q8IZH2 1706 aaKnown RBP24.35■■□□□ 1.49
SDR39U1-217ENST00000556249 NRXN3Q9Y4C0 1643 aa24.35■■□□□ 1.49
SDR39U1-217ENST00000556249 NGLY1Q96IV0 654 aa24.34■■□□□ 1.49
SDR39U1-217ENST00000556249 NUP155O75694 1391 aa24.33■■□□□ 1.49
SDR39U1-217ENST00000556249 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.49
SDR39U1-217ENST00000556249 IQGAP3Q86VI3 1631 aa24.32■■□□□ 1.48
SDR39U1-217ENST00000556249 SRCAPQ6ZRS2 3230 aa24.31■■□□□ 1.48
SDR39U1-217ENST00000556249 SETBP1Q9Y6X0 1596 aa24.29■■□□□ 1.48
SDR39U1-217ENST00000556249 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
SDR39U1-217ENST00000556249 ITGAEP38570 1179 aa24.27■■□□□ 1.48
SDR39U1-217ENST00000556249 USP21Q9UK80 565 aa24.26■■□□□ 1.47
SDR39U1-217ENST00000556249 NALCNQ8IZF0 1738 aa24.25■■□□□ 1.47
SDR39U1-217ENST00000556249 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
SDR39U1-217ENST00000556249 ROCK1Q13464 1354 aa24.23■■□□□ 1.47
SDR39U1-217ENST00000556249 ATAD2Q6PL18 1390 aa24.23■■□□□ 1.47
SDR39U1-217ENST00000556249 C1orf167Q5SNV9 1468 aa24.23■■□□□ 1.47
SDR39U1-217ENST00000556249 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
SDR39U1-217ENST00000556249 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
SDR39U1-217ENST00000556249 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
SDR39U1-217ENST00000556249 ZRANB1Q9UGI0 708 aa24.17■■□□□ 1.46
SDR39U1-217ENST00000556249 FNBP4Q8N3X1 1017 aaPredicted RBP24.16■■□□□ 1.46
SDR39U1-217ENST00000556249 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
SDR39U1-217ENST00000556249 ROBO2Q9HCK4 1378 aa24.15■■□□□ 1.46
SDR39U1-217ENST00000556249 ATRNO75882 1429 aa24.12■■□□□ 1.45
SDR39U1-217ENST00000556249 CLTCL1P53675 1640 aa24.12■■□□□ 1.45
SDR39U1-217ENST00000556249 PTCH1Q13635 1447 aa24.11■■□□□ 1.45
SDR39U1-217ENST00000556249 LAMC1P11047 1609 aa24.11■■□□□ 1.45
SDR39U1-217ENST00000556249 XPCQ01831 940 aaPredicted RBP24.09■■□□□ 1.45
SDR39U1-217ENST00000556249 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
SDR39U1-217ENST00000556249 BCL9LQ86UU0 1499 aa24.07■■□□□ 1.44
SDR39U1-217ENST00000556249 FOXD1Q16676 465 aa24.06■■□□□ 1.44
SDR39U1-217ENST00000556249 ESCO1Q5FWF5 840 aa24.06■■□□□ 1.44
SDR39U1-217ENST00000556249 EP400Q96L91 3159 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms