RNA–Protein interactions for RNA: ENST00000556167.1

PSMA6-212, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-212ENST00000556167 RIMS2Q9UQ26 1411 aa23.89■■□□□ 1.41
PSMA6-212ENST00000556167 ZFYVE9O95405 1425 aa23.88■■□□□ 1.41
PSMA6-212ENST00000556167 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.88■■□□□ 1.41
PSMA6-212ENST00000556167 NPHP4O75161 1426 aaPredicted RBP23.87■■□□□ 1.41
PSMA6-212ENST00000556167 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
PSMA6-212ENST00000556167 LTKP29376 864 aa23.85■■□□□ 1.41
PSMA6-212ENST00000556167 PPLO60437 1756 aa23.83■■□□□ 1.4
PSMA6-212ENST00000556167 RPGRIP1LQ68CZ1 1315 aa23.83■■□□□ 1.4
PSMA6-212ENST00000556167 PPP1R15AO75807 674 aaPredicted RBP23.82■■□□□ 1.4
PSMA6-212ENST00000556167 NEXMIFQ5QGS0 1516 aa23.81■■□□□ 1.4
PSMA6-212ENST00000556167 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
PSMA6-212ENST00000556167 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
PSMA6-212ENST00000556167 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
PSMA6-212ENST00000556167 IFT172Q9UG01 1749 aa23.79■■□□□ 1.4
PSMA6-212ENST00000556167 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
PSMA6-212ENST00000556167 RGL3Q3MIN7 710 aa23.74■■□□□ 1.39
PSMA6-212ENST00000556167 BCANQ96GW7 911 aa23.74■■□□□ 1.39
PSMA6-212ENST00000556167 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
PSMA6-212ENST00000556167 NUTM2DQ5VT03 806 aaPredicted RBP23.72■■□□□ 1.39
PSMA6-212ENST00000556167 SETBP1Q9Y6X0 1596 aa23.71■■□□□ 1.39
PSMA6-212ENST00000556167 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
PSMA6-212ENST00000556167 TBX22Q9Y458 520 aa23.67■■□□□ 1.38
PSMA6-212ENST00000556167 STAC3Q96MF2 364 aa23.66■■□□□ 1.38
PSMA6-212ENST00000556167 MYOM2P54296 1465 aa23.66■■□□□ 1.38
PSMA6-212ENST00000556167 ADAMTS13Q76LX8 1427 aa23.66■■□□□ 1.38
PSMA6-212ENST00000556167 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
PSMA6-212ENST00000556167 SLC26A8Q96RN1 970 aa23.65■■□□□ 1.38
PSMA6-212ENST00000556167 ZNF335Q9H4Z2 1342 aaPredicted RBP23.64■■□□□ 1.38
PSMA6-212ENST00000556167 LTBP4Q8N2S1 1624 aa23.64■■□□□ 1.38
PSMA6-212ENST00000556167 CPS1P31327 1500 aa23.64■■□□□ 1.37
PSMA6-212ENST00000556167 PIK3R4Q99570 1358 aa23.63■■□□□ 1.37
PSMA6-212ENST00000556167 STRCP1A6NGW2 1772 aa23.62■■□□□ 1.37
PSMA6-212ENST00000556167 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
PSMA6-212ENST00000556167 SENP3Q9H4L4 574 aaPredicted RBP23.6■■□□□ 1.37
PSMA6-212ENST00000556167 NWD1Q149M9 1564 aa23.6■■□□□ 1.37
PSMA6-212ENST00000556167 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
PSMA6-212ENST00000556167 LAMC1P11047 1609 aa23.59■■□□□ 1.37
PSMA6-212ENST00000556167 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
PSMA6-212ENST00000556167 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
PSMA6-212ENST00000556167 NRXN1Q9ULB1 1477 aa23.59■■□□□ 1.37
PSMA6-212ENST00000556167 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
PSMA6-212ENST00000556167 KCNA6P17658 529 aa23.58■■□□□ 1.37
PSMA6-212ENST00000556167 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
PSMA6-212ENST00000556167 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
PSMA6-212ENST00000556167 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
PSMA6-212ENST00000556167 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
PSMA6-212ENST00000556167 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
PSMA6-212ENST00000556167 CERKQ8TCT0 537 aa23.53■■□□□ 1.36
PSMA6-212ENST00000556167 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
PSMA6-212ENST00000556167 XRN1Q8IZH2 1706 aaKnown RBP23.51■■□□□ 1.35
PSMA6-212ENST00000556167 METP08581 1390 aa23.5■■□□□ 1.35
PSMA6-212ENST00000556167 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
PSMA6-212ENST00000556167 C14orf93Q9H972 538 aaKnown RBP23.49■■□□□ 1.35
PSMA6-212ENST00000556167 KIAA1210Q9ULL0 1709 aa23.49■■□□□ 1.35
PSMA6-212ENST00000556167 TONSLQ96HA7 1378 aa23.49■■□□□ 1.35
PSMA6-212ENST00000556167 LRRC7Q96NW7 1537 aa23.49■■□□□ 1.35
PSMA6-212ENST00000556167 XIRP1Q702N8 1843 aaKnown RBP23.48■■□□□ 1.35
PSMA6-212ENST00000556167 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
PSMA6-212ENST00000556167 AMOTL2Q9Y2J4 779 aa23.47■■□□□ 1.35
PSMA6-212ENST00000556167 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
PSMA6-212ENST00000556167 KNDC1Q76NI1 1749 aa23.45■■□□□ 1.34
PSMA6-212ENST00000556167 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
PSMA6-212ENST00000556167 PRAG1Q86YV5 1406 aa23.43■■□□□ 1.34
PSMA6-212ENST00000556167 CFAP70Q5T0N1 1121 aa23.43■■□□□ 1.34
PSMA6-212ENST00000556167 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
PSMA6-212ENST00000556167 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
PSMA6-212ENST00000556167 PTCH1Q13635 1447 aa23.42■■□□□ 1.34
PSMA6-212ENST00000556167 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
PSMA6-212ENST00000556167 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
PSMA6-212ENST00000556167 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
PSMA6-212ENST00000556167 YTHDC2Q9H6S0 1430 aaKnown RBP23.39■■□□□ 1.33
PSMA6-212ENST00000556167 TMEM132EQ6IEE7 984 aa23.38■■□□□ 1.33
PSMA6-212ENST00000556167 TECPR2O15040 1411 aa23.38■■□□□ 1.33
PSMA6-212ENST00000556167 ADGRB1O14514 1584 aa23.38■■□□□ 1.33
PSMA6-212ENST00000556167 ABCC11Q96J66 1382 aa23.38■■□□□ 1.33
PSMA6-212ENST00000556167 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
PSMA6-212ENST00000556167 MSH6P52701 1360 aa23.34■■□□□ 1.33
PSMA6-212ENST00000556167 SIRT1Q96EB6 747 aa23.33■■□□□ 1.33
PSMA6-212ENST00000556167 STK26Q9P289 416 aa23.33■■□□□ 1.33
PSMA6-212ENST00000556167 DLC1Q96QB1 1528 aa23.33■■□□□ 1.32
PSMA6-212ENST00000556167 ROBO2Q9HCK4 1378 aa23.32■■□□□ 1.32
PSMA6-212ENST00000556167 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
PSMA6-212ENST00000556167 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.31■■□□□ 1.32
PSMA6-212ENST00000556167 TOM1O60784 492 aa23.31■■□□□ 1.32
PSMA6-212ENST00000556167 FAM135BQ49AJ0 1406 aa23.31■■□□□ 1.32
PSMA6-212ENST00000556167 FBXO41Q8TF61 875 aa23.3■■□□□ 1.32
PSMA6-212ENST00000556167 NALCNQ8IZF0 1738 aa23.3■■□□□ 1.32
PSMA6-212ENST00000556167 UBAP1LF5GYI3 381 aa23.29■■□□□ 1.32
PSMA6-212ENST00000556167 RBM33Q96EV2 1170 aaKnown RBP23.29■■□□□ 1.32
PSMA6-212ENST00000556167 C19orf44Q9H6X5 657 aa23.29■■□□□ 1.32
PSMA6-212ENST00000556167 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
PSMA6-212ENST00000556167 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
PSMA6-212ENST00000556167 DCCP43146 1447 aa23.27■■□□□ 1.32
PSMA6-212ENST00000556167 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
PSMA6-212ENST00000556167 NBPF8Q3BBV2 869 aa23.25■■□□□ 1.31
PSMA6-212ENST00000556167 ROCK2O75116 1388 aaKnown RBP23.25■■□□□ 1.31
PSMA6-212ENST00000556167 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
PSMA6-212ENST00000556167 CADPS2Q86UW7 1296 aa23.24■■□□□ 1.31
PSMA6-212ENST00000556167 TRAK1Q9UPV9 953 aa23.24■■□□□ 1.31
PSMA6-212ENST00000556167 ATF3P18847 181 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms