RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
PRKCH-220ENST00000556164 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
PRKCH-220ENST00000556164 PTPN23Q9H3S7 1636 aa9.18□□□□□ -0.94
PRKCH-220ENST00000556164 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
PRKCH-220ENST00000556164 ROBO1Q9Y6N7 1651 aa9.17□□□□□ -0.94
PRKCH-220ENST00000556164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRKCH-220ENST00000556164 RRP7BPQ9NSQ0 103 aa9.17□□□□□ -0.94
PRKCH-220ENST00000556164 EFCAB6Q5THR3 1501 aa9.16□□□□□ -0.94
PRKCH-220ENST00000556164 KANK1Q14678 1352 aa9.16□□□□□ -0.94
PRKCH-220ENST00000556164 TMEM2Q9UHN6 1383 aa9.16□□□□□ -0.94
PRKCH-220ENST00000556164 RGS17Q9UGC6 210 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-220ENST00000556164 ABCC5O15440 1437 aa9.15□□□□□ -0.94
PRKCH-220ENST00000556164 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
PRKCH-220ENST00000556164 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.95
PRKCH-220ENST00000556164 DAPK1P53355 1430 aa9.14□□□□□ -0.95
PRKCH-220ENST00000556164 FAM135BQ49AJ0 1406 aa9.14□□□□□ -0.95
PRKCH-220ENST00000556164 TMEM94Q12767 1356 aa9.14□□□□□ -0.95
PRKCH-220ENST00000556164 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
PRKCH-220ENST00000556164 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
PRKCH-220ENST00000556164 ADGRB3O60242 1522 aa9.13□□□□□ -0.95
PRKCH-220ENST00000556164 LMTK2Q8IWU2 1503 aa9.13□□□□□ -0.95
PRKCH-220ENST00000556164 SETD1AO15047 1707 aaKnown RBP9.13□□□□□ -0.95
PRKCH-220ENST00000556164 PHLPP1O60346 1717 aa9.13□□□□□ -0.95
PRKCH-220ENST00000556164 TET3O43151 1660 aa9.13□□□□□ -0.95
PRKCH-220ENST00000556164 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
PRKCH-220ENST00000556164 KCNA6P17658 529 aa9.12□□□□□ -0.95
PRKCH-220ENST00000556164 IDI1Q13907 227 aa9.12□□□□□ -0.95
PRKCH-220ENST00000556164 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
PRKCH-220ENST00000556164 RBM33Q96EV2 1170 aaKnown RBP9.12□□□□□ -0.95
PRKCH-220ENST00000556164 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
PRKCH-220ENST00000556164 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
PRKCH-220ENST00000556164 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
PRKCH-220ENST00000556164 GCC2Q8IWJ2 1684 aa9.11□□□□□ -0.95
PRKCH-220ENST00000556164 CHD2O14647 1828 aaKnown RBP9.11□□□□□ -0.95
PRKCH-220ENST00000556164 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
PRKCH-220ENST00000556164 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
PRKCH-220ENST00000556164 FGD6Q6ZV73 1430 aa9.11□□□□□ -0.95
PRKCH-220ENST00000556164 APLP2Q06481 763 aa9.1□□□□□ -0.95
PRKCH-220ENST00000556164 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
PRKCH-220ENST00000556164 MSH6P52701 1360 aa9.1□□□□□ -0.95
PRKCH-220ENST00000556164 NOS1P29475 1434 aa9.09□□□□□ -0.95
PRKCH-220ENST00000556164 HOMEZQ8IX15 550 aa9.08□□□□□ -0.96
PRKCH-220ENST00000556164 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-220ENST00000556164 COL16A1Q07092 1604 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-220ENST00000556164 PPP1R15AO75807 674 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-220ENST00000556164 SLC52A1Q9NWF4 448 aa9.07□□□□□ -0.96
PRKCH-220ENST00000556164 RPRD2Q5VT52 1461 aaKnown RBP9.07□□□□□ -0.96
PRKCH-220ENST00000556164 TMEM131LA2VDJ0 1609 aa9.06□□□□□ -0.96
PRKCH-220ENST00000556164 SLAIN2Q9P270 581 aa9.06□□□□□ -0.96
PRKCH-220ENST00000556164 JCADQ9P266 1359 aa9.06□□□□□ -0.96
PRKCH-220ENST00000556164 PLEKHG1Q9ULL1 1385 aa9.06□□□□□ -0.96
PRKCH-220ENST00000556164 ADGRL2O95490 1459 aa9.06□□□□□ -0.96
PRKCH-220ENST00000556164 ZFYVE9O95405 1425 aa9.05□□□□□ -0.96
PRKCH-220ENST00000556164 RIMS2Q9UQ26 1411 aa9.05□□□□□ -0.96
PRKCH-220ENST00000556164 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-220ENST00000556164 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-220ENST00000556164 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
PRKCH-220ENST00000556164 FAM50AQ14320 339 aaKnown RBP9.04□□□□□ -0.96
PRKCH-220ENST00000556164 C14orf37Q86TY3 774 aa9.04□□□□□ -0.96
PRKCH-220ENST00000556164 E9PCH4 1651 aa9.04□□□□□ -0.96
PRKCH-220ENST00000556164 SHPRHQ149N8 1683 aa9.04□□□□□ -0.96
PRKCH-220ENST00000556164 LRP6O75581 1613 aa9.03□□□□□ -0.96
PRKCH-220ENST00000556164 CHGAP10645 457 aaKnown RBP9.03□□□□□ -0.96
PRKCH-220ENST00000556164 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-220ENST00000556164 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
PRKCH-220ENST00000556164 MEX3CQ5U5Q3 659 aaKnown RBP9.03□□□□□ -0.96
PRKCH-220ENST00000556164 UNC13BO14795 1591 aa9.03□□□□□ -0.96
PRKCH-220ENST00000556164 DIP2AQ14689 1571 aa9.03□□□□□ -0.96
PRKCH-220ENST00000556164 AHDC1Q5TGY3 1603 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-220ENST00000556164 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-220ENST00000556164 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-220ENST00000556164 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.01□□□□□ -0.97
PRKCH-220ENST00000556164 TBX22Q9Y458 520 aa9.01□□□□□ -0.97
PRKCH-220ENST00000556164 NCOA3Q9Y6Q9 1424 aa9.01□□□□□ -0.97
PRKCH-220ENST00000556164 SPATA31A6Q5VVP1 1343 aa9.01□□□□□ -0.97
PRKCH-220ENST00000556164 TRPM2O94759 1503 aa9□□□□□ -0.97
PRKCH-220ENST00000556164 ADAMTS13Q76LX8 1427 aa9□□□□□ -0.97
PRKCH-220ENST00000556164 ATF3P18847 181 aa9□□□□□ -0.97
PRKCH-220ENST00000556164 VASPP50552 380 aaPredicted RBP9□□□□□ -0.97
PRKCH-220ENST00000556164 ZNF772Q68DY9 489 aaPredicted RBP9□□□□□ -0.97
PRKCH-220ENST00000556164 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
PRKCH-220ENST00000556164 TRIM52Q96A61 297 aa9□□□□□ -0.97
PRKCH-220ENST00000556164 IQGAP3Q86VI3 1631 aa9□□□□□ -0.97
PRKCH-220ENST00000556164 PIK3R4Q99570 1358 aa8.99□□□□□ -0.97
PRKCH-220ENST00000556164 C19orf44Q9H6X5 657 aa8.98□□□□□ -0.97
PRKCH-220ENST00000556164 XRN1Q8IZH2 1706 aaKnown RBP8.97□□□□□ -0.97
PRKCH-220ENST00000556164 NUTM2BA6NNL0 878 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-220ENST00000556164 NUTM2EB1AL46 878 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-220ENST00000556164 NUTM2AQ8IVF1 878 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-220ENST00000556164 UPF1Q92900 1129 aaKnown RBP eCLIP8.97□□□□□ -0.97
PRKCH-220ENST00000556164 NRXN3Q9Y4C0 1643 aa8.97□□□□□ -0.97
PRKCH-220ENST00000556164 SPHKAPQ2M3C7 1700 aa8.97□□□□□ -0.97
PRKCH-220ENST00000556164 PTPRUQ92729 1446 aa8.97□□□□□ -0.97
PRKCH-220ENST00000556164 ASXL1Q8IXJ9 1541 aa8.96□□□□□ -0.97
PRKCH-220ENST00000556164 NHSL1Q5SYE7 1610 aa8.96□□□□□ -0.98
PRKCH-220ENST00000556164 RXRBP28702 533 aa8.96□□□□□ -0.98
PRKCH-220ENST00000556164 BRINP3Q76B58 766 aa8.96□□□□□ -0.98
PRKCH-220ENST00000556164 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
PRKCH-220ENST00000556164 DCCP43146 1447 aa8.95□□□□□ -0.98
PRKCH-220ENST00000556164 SETBP1Q9Y6X0 1596 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms