RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.88
SNX6-206ENST00000556162 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.88
SNX6-206ENST00000556162 SPATA31E1Q6ZUB1 1445 aa20.58■□□□□ 0.88
SNX6-206ENST00000556162 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
SNX6-206ENST00000556162 SCAF11Q99590 1463 aaKnown RBP20.57■□□□□ 0.88
SNX6-206ENST00000556162 ZFYVE9O95405 1425 aa20.56■□□□□ 0.88
SNX6-206ENST00000556162 SIN3AQ96ST3 1273 aa20.56■□□□□ 0.88
SNX6-206ENST00000556162 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
SNX6-206ENST00000556162 STRCQ7RTU9 1775 aa20.55■□□□□ 0.88
SNX6-206ENST00000556162 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
SNX6-206ENST00000556162 NEURL4Q96JN8 1562 aa20.54■□□□□ 0.88
SNX6-206ENST00000556162 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
SNX6-206ENST00000556162 BCANQ96GW7 911 aa20.53■□□□□ 0.88
SNX6-206ENST00000556162 NPHP4O75161 1426 aaPredicted RBP20.52■□□□□ 0.88
SNX6-206ENST00000556162 MED14O60244 1454 aa20.52■□□□□ 0.88
SNX6-206ENST00000556162 POLR1AO95602 1720 aaPredicted RBP20.51■□□□□ 0.87
SNX6-206ENST00000556162 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
SNX6-206ENST00000556162 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
SNX6-206ENST00000556162 CLSPNQ9HAW4 1339 aa20.49■□□□□ 0.87
SNX6-206ENST00000556162 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
SNX6-206ENST00000556162 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
SNX6-206ENST00000556162 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
SNX6-206ENST00000556162 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
SNX6-206ENST00000556162 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
SNX6-206ENST00000556162 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
SNX6-206ENST00000556162 ADGRF5Q8IZF2 1346 aa20.44■□□□□ 0.86
SNX6-206ENST00000556162 PPLO60437 1756 aa20.43■□□□□ 0.86
SNX6-206ENST00000556162 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
SNX6-206ENST00000556162 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
SNX6-206ENST00000556162 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
SNX6-206ENST00000556162 IFT172Q9UG01 1749 aa20.4■□□□□ 0.86
SNX6-206ENST00000556162 MYOM2P54296 1465 aa20.39■□□□□ 0.85
SNX6-206ENST00000556162 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
SNX6-206ENST00000556162 SETBP1Q9Y6X0 1596 aa20.37■□□□□ 0.85
SNX6-206ENST00000556162 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
SNX6-206ENST00000556162 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
SNX6-206ENST00000556162 NRXN1Q9ULB1 1477 aa20.35■□□□□ 0.85
SNX6-206ENST00000556162 DIP2AQ14689 1571 aa20.33■□□□□ 0.85
SNX6-206ENST00000556162 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.85
SNX6-206ENST00000556162 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
SNX6-206ENST00000556162 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
SNX6-206ENST00000556162 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
SNX6-206ENST00000556162 KCNA6P17658 529 aa20.32■□□□□ 0.84
SNX6-206ENST00000556162 CFAP70Q5T0N1 1121 aa20.32■□□□□ 0.84
SNX6-206ENST00000556162 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
SNX6-206ENST00000556162 METP08581 1390 aa20.31■□□□□ 0.84
SNX6-206ENST00000556162 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
SNX6-206ENST00000556162 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
SNX6-206ENST00000556162 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.84
SNX6-206ENST00000556162 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
SNX6-206ENST00000556162 LTBP4Q8N2S1 1624 aa20.24■□□□□ 0.83
SNX6-206ENST00000556162 LAMC1P11047 1609 aa20.23■□□□□ 0.83
SNX6-206ENST00000556162 SETD1AO15047 1707 aaKnown RBP20.23■□□□□ 0.83
SNX6-206ENST00000556162 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
SNX6-206ENST00000556162 PROSER2Q86WR7 435 aaPredicted RBP20.23■□□□□ 0.83
SNX6-206ENST00000556162 STK26Q9P289 416 aa20.23■□□□□ 0.83
SNX6-206ENST00000556162 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
SNX6-206ENST00000556162 CPS1P31327 1500 aa20.23■□□□□ 0.83
SNX6-206ENST00000556162 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
SNX6-206ENST00000556162 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
SNX6-206ENST00000556162 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
SNX6-206ENST00000556162 STRCP1A6NGW2 1772 aa20.2■□□□□ 0.82
SNX6-206ENST00000556162 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
SNX6-206ENST00000556162 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
SNX6-206ENST00000556162 ABCC11Q96J66 1382 aa20.19■□□□□ 0.82
SNX6-206ENST00000556162 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
SNX6-206ENST00000556162 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
SNX6-206ENST00000556162 KIAA1210Q9ULL0 1709 aa20.17■□□□□ 0.82
SNX6-206ENST00000556162 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
SNX6-206ENST00000556162 ADGRB1O14514 1584 aa20.17■□□□□ 0.82
SNX6-206ENST00000556162 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
SNX6-206ENST00000556162 ROCK2O75116 1388 aaKnown RBP20.16■□□□□ 0.82
SNX6-206ENST00000556162 TMEM94Q12767 1356 aa20.16■□□□□ 0.82
SNX6-206ENST00000556162 TRAK1Q9UPV9 953 aa20.16■□□□□ 0.82
SNX6-206ENST00000556162 XRN1Q8IZH2 1706 aaKnown RBP20.15■□□□□ 0.82
SNX6-206ENST00000556162 ROBO2Q9HCK4 1378 aa20.15■□□□□ 0.82
SNX6-206ENST00000556162 SIRT1Q96EB6 747 aa20.14■□□□□ 0.81
SNX6-206ENST00000556162 TECPR2O15040 1411 aa20.14■□□□□ 0.81
SNX6-206ENST00000556162 PTCH1Q13635 1447 aa20.14■□□□□ 0.81
SNX6-206ENST00000556162 C14orf37Q86TY3 774 aa20.13■□□□□ 0.81
SNX6-206ENST00000556162 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
SNX6-206ENST00000556162 WAPLQ7Z5K2 1190 aa20.11■□□□□ 0.81
SNX6-206ENST00000556162 CARD11Q9BXL7 1154 aa20.11■□□□□ 0.81
SNX6-206ENST00000556162 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
SNX6-206ENST00000556162 POGKQ9P215 609 aa20.11■□□□□ 0.81
SNX6-206ENST00000556162 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
SNX6-206ENST00000556162 PRAM1Q96QH2 718 aa20.1■□□□□ 0.81
SNX6-206ENST00000556162 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
SNX6-206ENST00000556162 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
SNX6-206ENST00000556162 GPRASP1Q5JY77 1395 aa20.09■□□□□ 0.81
SNX6-206ENST00000556162 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
SNX6-206ENST00000556162 DLC1Q96QB1 1528 aa20.08■□□□□ 0.81
SNX6-206ENST00000556162 KNDC1Q76NI1 1749 aa20.08■□□□□ 0.8
SNX6-206ENST00000556162 MSH6P52701 1360 aa20.07■□□□□ 0.8
SNX6-206ENST00000556162 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
SNX6-206ENST00000556162 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
SNX6-206ENST00000556162 XIRP1Q702N8 1843 aaKnown RBP20.03■□□□□ 0.8
SNX6-206ENST00000556162 ATF3P18847 181 aa20.03■□□□□ 0.8
SNX6-206ENST00000556162 ADGRL3Q9HAR2 1447 aa20.03■□□□□ 0.8
SNX6-206ENST00000556162 TOM1O60784 492 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms