RNA–Protein interactions for RNA: ENST00000555881.5

COCH-209, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-209ENST00000555881 RIMS2Q9UQ26 1411 aa32.24■■■□□ 2.75
COCH-209ENST00000555881 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
COCH-209ENST00000555881 HDGFP51858 240 aaKnown RBP32.16■■■□□ 2.74
COCH-209ENST00000555881 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.16■■■□□ 2.74
COCH-209ENST00000555881 NEXMIFQ5QGS0 1516 aa32.15■■■□□ 2.74
COCH-209ENST00000555881 ZNF326Q5BKZ1 582 aaKnown RBP32.13■■■□□ 2.73
COCH-209ENST00000555881 SPATA31E1Q6ZUB1 1445 aa32.13■■■□□ 2.73
COCH-209ENST00000555881 PLEKHG1Q9ULL1 1385 aa32.11■■■□□ 2.73
COCH-209ENST00000555881 PPP1R15AO75807 674 aaPredicted RBP32.1■■■□□ 2.73
COCH-209ENST00000555881 PPLO60437 1756 aa32.09■■■□□ 2.73
COCH-209ENST00000555881 RPGRIP1LQ68CZ1 1315 aa32.06■■■□□ 2.72
COCH-209ENST00000555881 NUTM2DQ5VT03 806 aaPredicted RBP32.05■■■□□ 2.72
COCH-209ENST00000555881 PCGF6Q9BYE7 350 aa32.05■■■□□ 2.72
COCH-209ENST00000555881 IFT172Q9UG01 1749 aa32.05■■■□□ 2.72
COCH-209ENST00000555881 LTBP4Q8N2S1 1624 aa32.04■■■□□ 2.72
COCH-209ENST00000555881 DHX57Q6P158 1386 aaKnown RBP32.04■■■□□ 2.72
COCH-209ENST00000555881 ZNF335Q9H4Z2 1342 aaPredicted RBP32.02■■■□□ 2.72
COCH-209ENST00000555881 DIP2AQ14689 1571 aa32■■■□□ 2.71
COCH-209ENST00000555881 SETBP1Q9Y6X0 1596 aa32■■■□□ 2.71
COCH-209ENST00000555881 NRXN3Q9Y4C0 1643 aa32■■■□□ 2.71
COCH-209ENST00000555881 RGL3Q3MIN7 710 aa31.98■■■□□ 2.71
COCH-209ENST00000555881 BCANQ96GW7 911 aa31.98■■■□□ 2.71
COCH-209ENST00000555881 ADAMTS13Q76LX8 1427 aa31.98■■■□□ 2.71
COCH-209ENST00000555881 SLC26A8Q96RN1 970 aa31.97■■■□□ 2.71
COCH-209ENST00000555881 STRCP1A6NGW2 1772 aa31.95■■■□□ 2.71
COCH-209ENST00000555881 VGFO15240 615 aaPredicted RBP31.95■■■□□ 2.71
COCH-209ENST00000555881 CPS1P31327 1500 aa31.94■■■□□ 2.7
COCH-209ENST00000555881 SENP3Q9H4L4 574 aaPredicted RBP31.93■■■□□ 2.7
COCH-209ENST00000555881 TBX22Q9Y458 520 aa31.92■■■□□ 2.7
COCH-209ENST00000555881 NWD1Q149M9 1564 aa31.9■■■□□ 2.7
COCH-209ENST00000555881 MYOM2P54296 1465 aa31.89■■■□□ 2.7
COCH-209ENST00000555881 CHD2O14647 1828 aaKnown RBP31.88■■■□□ 2.69
COCH-209ENST00000555881 SETD1AO15047 1707 aaKnown RBP31.86■■■□□ 2.69
COCH-209ENST00000555881 CERKQ8TCT0 537 aa31.86■■■□□ 2.69
COCH-209ENST00000555881 PIK3R4Q99570 1358 aa31.85■■■□□ 2.69
COCH-209ENST00000555881 ADGRF5Q8IZF2 1346 aa31.84■■■□□ 2.69
COCH-209ENST00000555881 IQSEC2Q5JU85 1478 aa31.84■■■□□ 2.69
COCH-209ENST00000555881 NRXN1Q9ULB1 1477 aa31.83■■■□□ 2.69
COCH-209ENST00000555881 ALKQ9UM73 1620 aa31.82■■■□□ 2.69
COCH-209ENST00000555881 KCNA6P17658 529 aa31.82■■■□□ 2.68
COCH-209ENST00000555881 PIK3C2GO75747 1445 aa31.82■■■□□ 2.68
COCH-209ENST00000555881 NKTRP30414 1462 aaKnown RBP31.81■■■□□ 2.68
COCH-209ENST00000555881 LRRC7Q96NW7 1537 aa31.79■■■□□ 2.68
COCH-209ENST00000555881 XRN1Q8IZH2 1706 aaKnown RBP31.76■■■□□ 2.67
COCH-209ENST00000555881 STAC3Q96MF2 364 aa31.76■■■□□ 2.67
COCH-209ENST00000555881 SIN3AQ96ST3 1273 aa31.76■■■□□ 2.67
COCH-209ENST00000555881 METP08581 1390 aa31.76■■■□□ 2.67
COCH-209ENST00000555881 PTPRUQ92729 1446 aa31.75■■■□□ 2.67
COCH-209ENST00000555881 LAMC1P11047 1609 aa31.75■■■□□ 2.67
COCH-209ENST00000555881 DCAF11Q8TEB1 546 aa31.74■■■□□ 2.67
COCH-209ENST00000555881 XIRP1Q702N8 1843 aaKnown RBP31.73■■■□□ 2.67
COCH-209ENST00000555881 NEUROD1Q13562 356 aa31.69■■■□□ 2.66
COCH-209ENST00000555881 AMOTL2Q9Y2J4 779 aa31.68■■■□□ 2.66
COCH-209ENST00000555881 KDM2AQ9Y2K7 1162 aa31.68■■■□□ 2.66
COCH-209ENST00000555881 ASXL1Q8IXJ9 1541 aa31.68■■■□□ 2.66
COCH-209ENST00000555881 C14orf93Q9H972 538 aaKnown RBP31.65■■■□□ 2.66
COCH-209ENST00000555881 TMEM94Q12767 1356 aa31.65■■■□□ 2.66
COCH-209ENST00000555881 PRAG1Q86YV5 1406 aa31.65■■■□□ 2.66
COCH-209ENST00000555881 PROSER2Q86WR7 435 aaPredicted RBP31.64■■■□□ 2.66
COCH-209ENST00000555881 L3MBTL2Q969R5 705 aa31.62■■■□□ 2.65
COCH-209ENST00000555881 CLSPNQ9HAW4 1339 aa31.6■■■□□ 2.65
COCH-209ENST00000555881 CFAP70Q5T0N1 1121 aa31.6■■■□□ 2.65
COCH-209ENST00000555881 KNDC1Q76NI1 1749 aa31.6■■■□□ 2.65
COCH-209ENST00000555881 PTCH1Q13635 1447 aa31.59■■■□□ 2.65
COCH-209ENST00000555881 NCOA3Q9Y6Q9 1424 aa31.58■■■□□ 2.65
COCH-209ENST00000555881 KIAA1210Q9ULL0 1709 aa31.58■■■□□ 2.65
COCH-209ENST00000555881 FBXO41Q8TF61 875 aa31.57■■■□□ 2.64
COCH-209ENST00000555881 TECPR2O15040 1411 aa31.57■■■□□ 2.64
COCH-209ENST00000555881 LRPPRCP42704 1394 aaKnown RBP31.56■■■□□ 2.64
COCH-209ENST00000555881 ADGRB1O14514 1584 aa31.56■■■□□ 2.64
COCH-209ENST00000555881 TMEM132EQ6IEE7 984 aa31.54■■■□□ 2.64
COCH-209ENST00000555881 RBM33Q96EV2 1170 aaKnown RBP31.54■■■□□ 2.64
COCH-209ENST00000555881 YTHDC2Q9H6S0 1430 aaKnown RBP31.54■■■□□ 2.64
COCH-209ENST00000555881 TONSLQ96HA7 1378 aa31.54■■■□□ 2.64
COCH-209ENST00000555881 ABCC11Q96J66 1382 aa31.52■■■□□ 2.64
COCH-209ENST00000555881 ROBO2Q9HCK4 1378 aa31.52■■■□□ 2.64
COCH-209ENST00000555881 MSH6P52701 1360 aa31.49■■■□□ 2.63
COCH-209ENST00000555881 UBAP1LF5GYI3 381 aa31.49■■■□□ 2.63
COCH-209ENST00000555881 NALCNQ8IZF0 1738 aa31.47■■■□□ 2.63
COCH-209ENST00000555881 CCER1Q8TC90 406 aaPredicted RBP31.47■■■□□ 2.63
COCH-209ENST00000555881 STK26Q9P289 416 aa31.47■■■□□ 2.63
COCH-209ENST00000555881 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.46■■■□□ 2.63
COCH-209ENST00000555881 TOM1O60784 492 aa31.46■■■□□ 2.63
COCH-209ENST00000555881 TRPM1Q7Z4N2 1603 aa31.45■■■□□ 2.62
COCH-209ENST00000555881 DLC1Q96QB1 1528 aa31.44■■■□□ 2.62
COCH-209ENST00000555881 ADGRL3Q9HAR2 1447 aa31.44■■■□□ 2.62
COCH-209ENST00000555881 C14orf37Q86TY3 774 aa31.44■■■□□ 2.62
COCH-209ENST00000555881 FAM135BQ49AJ0 1406 aa31.43■■■□□ 2.62
COCH-209ENST00000555881 DCCP43146 1447 aa31.41■■■□□ 2.62
COCH-209ENST00000555881 SIRT1Q96EB6 747 aa31.41■■■□□ 2.62
COCH-209ENST00000555881 C19orf44Q9H6X5 657 aa31.41■■■□□ 2.62
COCH-209ENST00000555881 ILDR1Q86SU0 546 aaPredicted RBP31.39■■■□□ 2.62
COCH-209ENST00000555881 ARHGEF28Q8N1W1 1705 aaKnown RBP31.37■■■□□ 2.61
COCH-209ENST00000555881 PLEKHH1Q9ULM0 1364 aa31.35■■■□□ 2.61
COCH-209ENST00000555881 NBPF1Q3BBV0 1214 aa31.35■■■□□ 2.61
COCH-209ENST00000555881 WAPLQ7Z5K2 1190 aa31.35■■■□□ 2.61
COCH-209ENST00000555881 NBPF8Q3BBV2 869 aa31.34■■■□□ 2.61
COCH-209ENST00000555881 CADPS2Q86UW7 1296 aa31.34■■■□□ 2.61
COCH-209ENST00000555881 TIMELESSQ9UNS1 1208 aa31.34■■■□□ 2.61
COCH-209ENST00000555881 TRAK1Q9UPV9 953 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms