RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
PCNX4-210ENST00000555740 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
PCNX4-210ENST00000555740 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
PCNX4-210ENST00000555740 CNTLNQ9NXG0 1405 aa11.41□□□□□ -0.58
PCNX4-210ENST00000555740 ZEB1P37275 1124 aaPredicted RBP11.41□□□□□ -0.58
PCNX4-210ENST00000555740 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
PCNX4-210ENST00000555740 SYNMO15061 1565 aa11.41□□□□□ -0.58
PCNX4-210ENST00000555740 NPATQ14207 1427 aa11.4□□□□□ -0.58
PCNX4-210ENST00000555740 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
PCNX4-210ENST00000555740 NOS1P29475 1434 aa11.4□□□□□ -0.58
PCNX4-210ENST00000555740 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
PCNX4-210ENST00000555740 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
PCNX4-210ENST00000555740 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.38□□□□□ -0.59
PCNX4-210ENST00000555740 KIF1BO60333 1816 aa11.38□□□□□ -0.59
PCNX4-210ENST00000555740 C3P01024 1663 aa11.38□□□□□ -0.59
PCNX4-210ENST00000555740 ERVK-7P63135 1459 aa11.37□□□□□ -0.59
PCNX4-210ENST00000555740 ADGRB3O60242 1522 aa11.37□□□□□ -0.59
PCNX4-210ENST00000555740 MADDQ8WXG6 1647 aa11.37□□□□□ -0.59
PCNX4-210ENST00000555740 TIMELESSQ9UNS1 1208 aa11.37□□□□□ -0.59
PCNX4-210ENST00000555740 MIER1Q8N108 512 aa11.36□□□□□ -0.59
PCNX4-210ENST00000555740 CCDC144AA2RUR9 1427 aa11.34□□□□□ -0.59
PCNX4-210ENST00000555740 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
PCNX4-210ENST00000555740 CHGAP10645 457 aaKnown RBP11.34□□□□□ -0.59
PCNX4-210ENST00000555740 SPATA31E1Q6ZUB1 1445 aa11.34□□□□□ -0.59
PCNX4-210ENST00000555740 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
PCNX4-210ENST00000555740 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
PCNX4-210ENST00000555740 DSG3P32926 999 aa11.32□□□□□ -0.6
PCNX4-210ENST00000555740 GGT6Q6P531 493 aa11.32□□□□□ -0.6
PCNX4-210ENST00000555740 PPLO60437 1756 aa11.32□□□□□ -0.6
PCNX4-210ENST00000555740 TMEM131LA2VDJ0 1609 aa11.32□□□□□ -0.6
PCNX4-210ENST00000555740 UGGT1Q9NYU2 1555 aa11.32□□□□□ -0.6
PCNX4-210ENST00000555740 ZNF142P52746 1687 aaPredicted RBP11.32□□□□□ -0.6
PCNX4-210ENST00000555740 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
PCNX4-210ENST00000555740 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
PCNX4-210ENST00000555740 MYOM2P54296 1465 aa11.3□□□□□ -0.6
PCNX4-210ENST00000555740 MYO5BQ9ULV0 1848 aa11.3□□□□□ -0.6
PCNX4-210ENST00000555740 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
PCNX4-210ENST00000555740 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
PCNX4-210ENST00000555740 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
PCNX4-210ENST00000555740 TONSLQ96HA7 1378 aa11.29□□□□□ -0.6
PCNX4-210ENST00000555740 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
PCNX4-210ENST00000555740 LAMC1P11047 1609 aa11.29□□□□□ -0.6
PCNX4-210ENST00000555740 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
PCNX4-210ENST00000555740 UBR1Q8IWV7 1749 aa11.28□□□□□ -0.6
PCNX4-210ENST00000555740 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
PCNX4-210ENST00000555740 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
PCNX4-210ENST00000555740 ZMYM3Q14202 1370 aa11.27□□□□□ -0.6
PCNX4-210ENST00000555740 NLRP1Q9C000 1473 aa11.27□□□□□ -0.61
PCNX4-210ENST00000555740 NRXN1Q9ULB1 1477 aa11.27□□□□□ -0.61
PCNX4-210ENST00000555740 NEXMIFQ5QGS0 1516 aa11.27□□□□□ -0.61
PCNX4-210ENST00000555740 TRPM1Q7Z4N2 1603 aa11.27□□□□□ -0.61
PCNX4-210ENST00000555740 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
PCNX4-210ENST00000555740 ARID4BQ4LE39 1312 aaPredicted RBP11.25□□□□□ -0.61
PCNX4-210ENST00000555740 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
PCNX4-210ENST00000555740 TNRQ92752 1358 aa11.24□□□□□ -0.61
PCNX4-210ENST00000555740 SLC52A1Q9NWF4 448 aa11.24□□□□□ -0.61
PCNX4-210ENST00000555740 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
PCNX4-210ENST00000555740 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
PCNX4-210ENST00000555740 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
PCNX4-210ENST00000555740 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-210ENST00000555740 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
PCNX4-210ENST00000555740 MLECQ14165 292 aa11.22□□□□□ -0.61
PCNX4-210ENST00000555740 STAC3Q96MF2 364 aa11.22□□□□□ -0.61
PCNX4-210ENST00000555740 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
PCNX4-210ENST00000555740 PTPRMP28827 1452 aa11.21□□□□□ -0.61
PCNX4-210ENST00000555740 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 PPP1R15AO75807 674 aaPredicted RBP11.2□□□□□ -0.62
PCNX4-210ENST00000555740 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
PCNX4-210ENST00000555740 SLIT1O75093 1534 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
PCNX4-210ENST00000555740 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 IQGAP1P46940 1657 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
PCNX4-210ENST00000555740 ARHGAP23Q9P227 1491 aa11.19□□□□□ -0.62
PCNX4-210ENST00000555740 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
PCNX4-210ENST00000555740 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
PCNX4-210ENST00000555740 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
PCNX4-210ENST00000555740 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
PCNX4-210ENST00000555740 FBXO31Q5XUX0 539 aaPredicted RBP11.17□□□□□ -0.62
PCNX4-210ENST00000555740 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
PCNX4-210ENST00000555740 IDI1Q13907 227 aa11.16□□□□□ -0.62
PCNX4-210ENST00000555740 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
PCNX4-210ENST00000555740 ADGRB1O14514 1584 aa11.14□□□□□ -0.63
PCNX4-210ENST00000555740 DIP2AQ14689 1571 aa11.14□□□□□ -0.63
PCNX4-210ENST00000555740 KNDC1Q76NI1 1749 aa11.14□□□□□ -0.63
PCNX4-210ENST00000555740 ASXL1Q8IXJ9 1541 aa11.13□□□□□ -0.63
PCNX4-210ENST00000555740 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
PCNX4-210ENST00000555740 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
PCNX4-210ENST00000555740 TMEM2Q9UHN6 1383 aa11.12□□□□□ -0.63
PCNX4-210ENST00000555740 ALKQ9UM73 1620 aa11.11□□□□□ -0.63
PCNX4-210ENST00000555740 DCAF11Q8TEB1 546 aa11.1□□□□□ -0.63
PCNX4-210ENST00000555740 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
PCNX4-210ENST00000555740 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
PCNX4-210ENST00000555740 MED14O60244 1454 aa11.09□□□□□ -0.63
PCNX4-210ENST00000555740 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
PCNX4-210ENST00000555740 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
PCNX4-210ENST00000555740 SCAF11Q99590 1463 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms