RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-210ENST00000555718 ZMYND10O75800 440 aa13.23□□□□□ -0.29
PPP4R3A-210ENST00000555718 PPP4CP60510 307 aa13.22□□□□□ -0.29
PPP4R3A-210ENST00000555718 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
PPP4R3A-210ENST00000555718 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
PPP4R3A-210ENST00000555718 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-210ENST00000555718 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
PPP4R3A-210ENST00000555718 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
PPP4R3A-210ENST00000555718 APLP1P51693 650 aa13.18□□□□□ -0.3
PPP4R3A-210ENST00000555718 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
PPP4R3A-210ENST00000555718 SLC10A3P09131 477 aa13.17□□□□□ -0.3
PPP4R3A-210ENST00000555718 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
PPP4R3A-210ENST00000555718 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
PPP4R3A-210ENST00000555718 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3A-210ENST00000555718 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3A-210ENST00000555718 CFHP08603 1231 aa13.09□□□□□ -0.31
PPP4R3A-210ENST00000555718 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
PPP4R3A-210ENST00000555718 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3A-210ENST00000555718 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
PPP4R3A-210ENST00000555718 TJAP1Q5JTD0 557 aa13.07□□□□□ -0.32
PPP4R3A-210ENST00000555718 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
PPP4R3A-210ENST00000555718 MTRQ99707 1265 aa13.06□□□□□ -0.32
PPP4R3A-210ENST00000555718 RDH13Q8NBN7 331 aa13.04□□□□□ -0.32
PPP4R3A-210ENST00000555718 COPS2P61201 443 aa13.03□□□□□ -0.32
PPP4R3A-210ENST00000555718 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
PPP4R3A-210ENST00000555718 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
PPP4R3A-210ENST00000555718 TMUB1Q9BVT8 246 aa13.03□□□□□ -0.32
PPP4R3A-210ENST00000555718 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
PPP4R3A-210ENST00000555718 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.33
PPP4R3A-210ENST00000555718 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
PPP4R3A-210ENST00000555718 BLOC1S3Q6QNY0 202 aa13.01□□□□□ -0.33
PPP4R3A-210ENST00000555718 KCNC4Q03721 635 aa13□□□□□ -0.33
PPP4R3A-210ENST00000555718 TRIM66O15016 1216 aa12.99□□□□□ -0.33
PPP4R3A-210ENST00000555718 KMT5BQ4FZB7 885 aa12.99□□□□□ -0.33
PPP4R3A-210ENST00000555718 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
PPP4R3A-210ENST00000555718 GPCPD1Q9NPB8 672 aa12.99□□□□□ -0.33
PPP4R3A-210ENST00000555718 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
PPP4R3A-210ENST00000555718 AMHR2Q16671 573 aa12.98□□□□□ -0.33
PPP4R3A-210ENST00000555718 CD46P15529 392 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 CLCN1P35523 988 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 GCGRP47871 477 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 PUS10Q3MIT2 529 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 AK7Q96M32 723 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 PRR14Q9BWN1 585 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 IL21Q9HBE4 155 aa12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
PPP4R3A-210ENST00000555718 FUT2Q10981 343 aa12.95□□□□□ -0.34
PPP4R3A-210ENST00000555718 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
PPP4R3A-210ENST00000555718 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
PPP4R3A-210ENST00000555718 PARP9Q8IXQ6 854 aa12.94□□□□□ -0.34
PPP4R3A-210ENST00000555718 A0A0G2JS52 829 aa12.93□□□□□ -0.34
PPP4R3A-210ENST00000555718 TLL1O43897 1013 aa12.93□□□□□ -0.34
PPP4R3A-210ENST00000555718 ZPR1O75312 459 aa12.92□□□□□ -0.34
PPP4R3A-210ENST00000555718 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
PPP4R3A-210ENST00000555718 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-210ENST00000555718 MORN1Q5T089 497 aa12.89□□□□□ -0.35
PPP4R3A-210ENST00000555718 PDE4DQ08499 809 aa12.88□□□□□ -0.35
PPP4R3A-210ENST00000555718 HLA-CQ95604 372 aa12.88□□□□□ -0.35
PPP4R3A-210ENST00000555718 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-210ENST00000555718 MS4A1P11836 297 aa12.86□□□□□ -0.35
PPP4R3A-210ENST00000555718 SCUBE3Q8IX30 993 aa12.86□□□□□ -0.35
PPP4R3A-210ENST00000555718 KDM4AO75164 1064 aa12.85□□□□□ -0.35
PPP4R3A-210ENST00000555718 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
PPP4R3A-210ENST00000555718 SLC27A5Q9Y2P5 690 aa12.85□□□□□ -0.35
PPP4R3A-210ENST00000555718 NR1I2O75469 434 aa12.83□□□□□ -0.36
PPP4R3A-210ENST00000555718 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
PPP4R3A-210ENST00000555718 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
PPP4R3A-210ENST00000555718 HOXA2O43364 376 aa12.8□□□□□ -0.36
PPP4R3A-210ENST00000555718 THAP11Q96EK4 314 aa12.8□□□□□ -0.36
PPP4R3A-210ENST00000555718 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
PPP4R3A-210ENST00000555718 RNF19BQ6ZMZ0 732 aa12.79□□□□□ -0.36
PPP4R3A-210ENST00000555718 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
PPP4R3A-210ENST00000555718 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3A-210ENST00000555718 ADH1BP00325 375 aa12.77□□□□□ -0.37
PPP4R3A-210ENST00000555718 S1PR4O95977 384 aa12.76□□□□□ -0.37
PPP4R3A-210ENST00000555718 USP46P62068 366 aa12.75□□□□□ -0.37
PPP4R3A-210ENST00000555718 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
PPP4R3A-210ENST00000555718 SPSB2Q99619 263 aa12.75□□□□□ -0.37
PPP4R3A-210ENST00000555718 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
PPP4R3A-210ENST00000555718 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
PPP4R3A-210ENST00000555718 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
PPP4R3A-210ENST00000555718 NDUFV2P19404 249 aa12.73□□□□□ -0.37
PPP4R3A-210ENST00000555718 GRIPAP1Q4V328 841 aa12.73□□□□□ -0.37
PPP4R3A-210ENST00000555718 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
PPP4R3A-210ENST00000555718 PRDM9Q9NQV7 894 aa12.73□□□□□ -0.37
PPP4R3A-210ENST00000555718 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
PPP4R3A-210ENST00000555718 RNF223E7ERA6 249 aa12.72□□□□□ -0.37
PPP4R3A-210ENST00000555718 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
PPP4R3A-210ENST00000555718 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
PPP4R3A-210ENST00000555718 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
PPP4R3A-210ENST00000555718 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
PPP4R3A-210ENST00000555718 SLC6A16Q9GZN6 736 aa12.7□□□□□ -0.38
PPP4R3A-210ENST00000555718 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
PPP4R3A-210ENST00000555718 SALL2Q9Y467 1007 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3A-210ENST00000555718 EMID1Q96A84 441 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3A-210ENST00000555718 FDX1P10109 184 aa12.67□□□□□ -0.38
PPP4R3A-210ENST00000555718 Q3C1V9 767 aa12.66□□□□□ -0.38
PPP4R3A-210ENST00000555718 RGS20O76081 388 aa12.65□□□□□ -0.38
PPP4R3A-210ENST00000555718 GGCXP38435 758 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms