RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SLC26A8Q96RN1 970 aa36.93■■■■□ 3.5
PRKCH-216ENST00000555542 SENP3Q9H4L4 574 aaPredicted RBP36.92■■■■□ 3.5
PRKCH-216ENST00000555542 RIMS2Q9UQ26 1411 aa36.92■■■■□ 3.5
PRKCH-216ENST00000555542 ZFYVE9O95405 1425 aa36.89■■■■□ 3.5
PRKCH-216ENST00000555542 SPHKAPQ2M3C7 1700 aa36.88■■■■□ 3.49
PRKCH-216ENST00000555542 HFM1A2PYH4 1435 aa36.85■■■■□ 3.49
PRKCH-216ENST00000555542 PLEKHG1Q9ULL1 1385 aa36.84■■■■□ 3.49
PRKCH-216ENST00000555542 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.84■■■■□ 3.49
PRKCH-216ENST00000555542 TRIM52Q96A61 297 aa36.83■■■■□ 3.49
PRKCH-216ENST00000555542 DISP3Q9P2K9 1392 aa36.81■■■■□ 3.48
PRKCH-216ENST00000555542 KCNA6P17658 529 aa36.81■■■■□ 3.48
PRKCH-216ENST00000555542 NUTM2DQ5VT03 806 aaPredicted RBP36.8■■■■□ 3.48
PRKCH-216ENST00000555542 XIRP1Q702N8 1843 aaKnown RBP36.78■■■■□ 3.48
PRKCH-216ENST00000555542 ALKQ9UM73 1620 aa36.77■■■■□ 3.48
PRKCH-216ENST00000555542 HSPA1LP34931 641 aa36.77■■■■□ 3.48
PRKCH-216ENST00000555542 PROSER2Q86WR7 435 aaPredicted RBP36.74■■■■□ 3.47
PRKCH-216ENST00000555542 TMEM94Q12767 1356 aa36.73■■■■□ 3.47
PRKCH-216ENST00000555542 NWD1Q149M9 1564 aa36.73■■■■□ 3.47
PRKCH-216ENST00000555542 NKTRP30414 1462 aaKnown RBP36.71■■■■□ 3.47
PRKCH-216ENST00000555542 ZNF326Q5BKZ1 582 aaKnown RBP36.71■■■■□ 3.47
PRKCH-216ENST00000555542 TRPM2O94759 1503 aa36.69■■■■□ 3.46
PRKCH-216ENST00000555542 CLTCL1P53675 1640 aa36.67■■■■□ 3.46
PRKCH-216ENST00000555542 RBM33Q96EV2 1170 aaKnown RBP36.67■■■■□ 3.46
PRKCH-216ENST00000555542 CHD2O14647 1828 aaKnown RBP36.66■■■■□ 3.46
PRKCH-216ENST00000555542 SLC4A1APQ9BWU0 796 aaKnown RBP36.66■■■■□ 3.46
PRKCH-216ENST00000555542 TBX22Q9Y458 520 aa36.66■■■■□ 3.46
PRKCH-216ENST00000555542 DIP2AQ14689 1571 aa36.65■■■■□ 3.46
PRKCH-216ENST00000555542 KIF1BO60333 1816 aa36.62■■■■□ 3.45
PRKCH-216ENST00000555542 ADAMTS13Q76LX8 1427 aa36.62■■■■□ 3.45
PRKCH-216ENST00000555542 MSH6P52701 1360 aa36.57■■■■□ 3.45
PRKCH-216ENST00000555542 PIK3R4Q99570 1358 aa36.53■■■■□ 3.44
PRKCH-216ENST00000555542 C14orf37Q86TY3 774 aa36.52■■■■□ 3.44
PRKCH-216ENST00000555542 NEXMIFQ5QGS0 1516 aa36.49■■■■□ 3.43
PRKCH-216ENST00000555542 SETBP1Q9Y6X0 1596 aa36.49■■■■□ 3.43
PRKCH-216ENST00000555542 NRXN3Q9Y4C0 1643 aa36.48■■■■□ 3.43
PRKCH-216ENST00000555542 FOXD1Q16676 465 aa36.46■■■■□ 3.43
PRKCH-216ENST00000555542 MED1Q15648 1581 aaPredicted RBP36.45■■■■□ 3.43
PRKCH-216ENST00000555542 FAM135BQ49AJ0 1406 aa36.45■■■■□ 3.43
PRKCH-216ENST00000555542 AMOTL2Q9Y2J4 779 aa36.45■■■■□ 3.43
PRKCH-216ENST00000555542 ROBO1Q9Y6N7 1651 aa36.44■■■■□ 3.42
PRKCH-216ENST00000555542 ILDR2Q71H61 639 aa36.43■■■■□ 3.42
PRKCH-216ENST00000555542 NCOA3Q9Y6Q9 1424 aa36.42■■■■□ 3.42
PRKCH-216ENST00000555542 PTPRUQ92729 1446 aa36.41■■■■□ 3.42
PRKCH-216ENST00000555542 MPHOSPH9Q99550 1183 aa36.4■■■■□ 3.42
PRKCH-216ENST00000555542 SETD5Q9C0A6 1442 aa36.38■■■■□ 3.41
PRKCH-216ENST00000555542 SLAIN2Q9P270 581 aa36.38■■■■□ 3.41
PRKCH-216ENST00000555542 VGFO15240 615 aaPredicted RBP36.37■■■■□ 3.41
PRKCH-216ENST00000555542 CCDC144AA2RUR9 1427 aa36.36■■■■□ 3.41
PRKCH-216ENST00000555542 ACIN1Q9UKV3 1341 aaKnown RBP36.35■■■■□ 3.41
PRKCH-216ENST00000555542 XRN1Q8IZH2 1706 aaKnown RBP36.35■■■■□ 3.41
PRKCH-216ENST00000555542 METP08581 1390 aa36.35■■■■□ 3.41
PRKCH-216ENST00000555542 RPGRIP1LQ68CZ1 1315 aa36.34■■■■□ 3.41
PRKCH-216ENST00000555542 ATF3P18847 181 aa36.33■■■■□ 3.41
PRKCH-216ENST00000555542 C19orf44Q9H6X5 657 aa36.33■■■■□ 3.41
PRKCH-216ENST00000555542 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.33■■■■□ 3.41
PRKCH-216ENST00000555542 PPLO60437 1756 aa36.31■■■■□ 3.4
PRKCH-216ENST00000555542 PHF23Q9BUL5 403 aaPredicted RBP36.31■■■■□ 3.4
PRKCH-216ENST00000555542 CADPS2Q86UW7 1296 aa36.3■■■■□ 3.4
PRKCH-216ENST00000555542 RAB3GAP2Q9H2M9 1393 aa36.25■■■■□ 3.39
PRKCH-216ENST00000555542 PHLPP1O60346 1717 aa36.25■■■■□ 3.39
PRKCH-216ENST00000555542 RGL3Q3MIN7 710 aa36.24■■■■□ 3.39
PRKCH-216ENST00000555542 SETD1AO15047 1707 aaKnown RBP36.2■■■■□ 3.38
PRKCH-216ENST00000555542 DCCP43146 1447 aa36.17■■■■□ 3.38
PRKCH-216ENST00000555542 SPATA31E1Q6ZUB1 1445 aa36.16■■■■□ 3.38
PRKCH-216ENST00000555542 SOCS7O14512 581 aa36.15■■■■□ 3.38
PRKCH-216ENST00000555542 ANKRD30BQ9BXX2 1392 aa36.13■■■■□ 3.37
PRKCH-216ENST00000555542 ADGRL3Q9HAR2 1447 aa36.12■■■■□ 3.37
PRKCH-216ENST00000555542 IFT172Q9UG01 1749 aa36.11■■■■□ 3.37
PRKCH-216ENST00000555542 NALCNQ8IZF0 1738 aa36.11■■■■□ 3.37
PRKCH-216ENST00000555542 ADGRF5Q8IZF2 1346 aa36.1■■■■□ 3.37
PRKCH-216ENST00000555542 PTCH1Q13635 1447 aa36.1■■■■□ 3.37
PRKCH-216ENST00000555542 COL16A1Q07092 1604 aaPredicted RBP36.08■■■■□ 3.37
PRKCH-216ENST00000555542 ROBO2Q9HCK4 1378 aa36.06■■■■□ 3.36
PRKCH-216ENST00000555542 JCADQ9P266 1359 aa36.06■■■■□ 3.36
PRKCH-216ENST00000555542 AHDC1Q5TGY3 1603 aaPredicted RBP36.05■■■■□ 3.36
PRKCH-216ENST00000555542 BRINP3Q76B58 766 aa36.05■■■■□ 3.36
PRKCH-216ENST00000555542 MST1RQ04912 1400 aa36.05■■■■□ 3.36
PRKCH-216ENST00000555542 ASXL1Q8IXJ9 1541 aa36.02■■■■□ 3.36
PRKCH-216ENST00000555542 PRAG1Q86YV5 1406 aa36■■■■□ 3.35
PRKCH-216ENST00000555542 STK26Q9P289 416 aa35.97■■■■□ 3.35
PRKCH-216ENST00000555542 PIK3C2GO75747 1445 aa35.97■■■■□ 3.35
PRKCH-216ENST00000555542 HRCP23327 699 aa35.92■■■■□ 3.34
PRKCH-216ENST00000555542 TMEM132EQ6IEE7 984 aa35.91■■■■□ 3.34
PRKCH-216ENST00000555542 NHSL1Q5SYE7 1610 aa35.9■■■■□ 3.34
PRKCH-216ENST00000555542 SHPRHQ149N8 1683 aa35.9■■■■□ 3.34
PRKCH-216ENST00000555542 LRPPRCP42704 1394 aaKnown RBP35.89■■■■□ 3.34
PRKCH-216ENST00000555542 SPATA31A6Q5VVP1 1343 aa35.89■■■■□ 3.34
PRKCH-216ENST00000555542 MYOM2P54296 1465 aa35.89■■■■□ 3.34
PRKCH-216ENST00000555542 C1orf167Q5SNV9 1468 aa35.89■■■■□ 3.34
PRKCH-216ENST00000555542 RGS17Q9UGC6 210 aaPredicted RBP35.89■■■■□ 3.34
PRKCH-216ENST00000555542 KNDC1Q76NI1 1749 aa35.86■■■■□ 3.33
PRKCH-216ENST00000555542 MEX3CQ5U5Q3 659 aaKnown RBP35.86■■■■□ 3.33
PRKCH-216ENST00000555542 LAMC1P11047 1609 aa35.86■■■■□ 3.33
PRKCH-216ENST00000555542 TECPR2O15040 1411 aa35.85■■■■□ 3.33
PRKCH-216ENST00000555542 DDX17Q92841 729 aaKnown RBP35.84■■■■□ 3.33
PRKCH-216ENST00000555542 YTHDC2Q9H6S0 1430 aaKnown RBP35.83■■■■□ 3.33
PRKCH-216ENST00000555542 WAPLQ7Z5K2 1190 aa35.83■■■■□ 3.33
PRKCH-216ENST00000555542 ABCC11Q96J66 1382 aa35.83■■■■□ 3.33
PRKCH-216ENST00000555542 NRXN1Q9ULB1 1477 aa35.83■■■■□ 3.33
PRKCH-216ENST00000555542 C14orf93Q9H972 538 aaKnown RBP35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms