RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 LTKP29376 864 aa14.21□□□□□ -0.13
NEK9-205ENST00000555405 REREQ9P2R6 1566 aa14.21□□□□□ -0.14
NEK9-205ENST00000555405 POGKQ9P215 609 aa14.2□□□□□ -0.14
NEK9-205ENST00000555405 RPGRIP1LQ68CZ1 1315 aa14.2□□□□□ -0.14
NEK9-205ENST00000555405 SYNMO15061 1565 aa14.19□□□□□ -0.14
NEK9-205ENST00000555405 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
NEK9-205ENST00000555405 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
NEK9-205ENST00000555405 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
NEK9-205ENST00000555405 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
NEK9-205ENST00000555405 MADDQ8WXG6 1647 aa14.17□□□□□ -0.14
NEK9-205ENST00000555405 C14orf93Q9H972 538 aaKnown RBP14.16□□□□□ -0.14
NEK9-205ENST00000555405 PREX1Q8TCU6 1659 aa14.16□□□□□ -0.14
NEK9-205ENST00000555405 NUTM2FA1L443 756 aa14.16□□□□□ -0.14
NEK9-205ENST00000555405 KIF1BO60333 1816 aa14.16□□□□□ -0.14
NEK9-205ENST00000555405 RIMS1Q86UR5 1692 aaKnown RBP14.16□□□□□ -0.14
NEK9-205ENST00000555405 STAC3Q96MF2 364 aa14.15□□□□□ -0.14
NEK9-205ENST00000555405 MINK1Q8N4C8 1332 aaPredicted RBP14.15□□□□□ -0.14
NEK9-205ENST00000555405 WAPLQ7Z5K2 1190 aa14.15□□□□□ -0.14
NEK9-205ENST00000555405 MIER1Q8N108 512 aa14.15□□□□□ -0.14
NEK9-205ENST00000555405 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
NEK9-205ENST00000555405 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
NEK9-205ENST00000555405 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
NEK9-205ENST00000555405 ANKLE2Q86XL3 938 aa14.14□□□□□ -0.15
NEK9-205ENST00000555405 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
NEK9-205ENST00000555405 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
NEK9-205ENST00000555405 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
NEK9-205ENST00000555405 A2ML1A8K2U0 1454 aa14.13□□□□□ -0.15
NEK9-205ENST00000555405 UHRF1BP1Q6BDS2 1440 aa14.13□□□□□ -0.15
NEK9-205ENST00000555405 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
NEK9-205ENST00000555405 TMF1P82094 1093 aa14.12□□□□□ -0.15
NEK9-205ENST00000555405 TMEM2Q9UHN6 1383 aa14.12□□□□□ -0.15
NEK9-205ENST00000555405 KIF7Q2M1P5 1343 aa14.12□□□□□ -0.15
NEK9-205ENST00000555405 MROH2AA6NES4 1674 aa14.11□□□□□ -0.15
NEK9-205ENST00000555405 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
NEK9-205ENST00000555405 PIK3C2BO00750 1634 aa14.11□□□□□ -0.15
NEK9-205ENST00000555405 PTPRMP28827 1452 aa14.1□□□□□ -0.15
NEK9-205ENST00000555405 RALGAPBQ86X10 1494 aa14.1□□□□□ -0.15
NEK9-205ENST00000555405 C14orf37Q86TY3 774 aa14.1□□□□□ -0.15
NEK9-205ENST00000555405 CENPJQ9HC77 1338 aaPredicted RBP14.1□□□□□ -0.15
NEK9-205ENST00000555405 ADGRB3O60242 1522 aa14.1□□□□□ -0.15
NEK9-205ENST00000555405 SRPK2P78362 688 aaKnown RBP14.09□□□□□ -0.15
NEK9-205ENST00000555405 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
NEK9-205ENST00000555405 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.16
NEK9-205ENST00000555405 C3P01024 1663 aa14.08□□□□□ -0.16
NEK9-205ENST00000555405 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
NEK9-205ENST00000555405 CCDC7Q96M83 1385 aa14.06□□□□□ -0.16
NEK9-205ENST00000555405 ANP32CO43423 234 aa14.06□□□□□ -0.16
NEK9-205ENST00000555405 AMOTL2Q9Y2J4 779 aa14.06□□□□□ -0.16
NEK9-205ENST00000555405 METP08581 1390 aa14.05□□□□□ -0.16
NEK9-205ENST00000555405 TESK2Q96S53 571 aa14.05□□□□□ -0.16
NEK9-205ENST00000555405 TMEM131LA2VDJ0 1609 aa14.05□□□□□ -0.16
NEK9-205ENST00000555405 NLRP1Q9C000 1473 aa14.05□□□□□ -0.16
NEK9-205ENST00000555405 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
NEK9-205ENST00000555405 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
NEK9-205ENST00000555405 DISP3Q9P2K9 1392 aa14.04□□□□□ -0.16
NEK9-205ENST00000555405 NEXMIFQ5QGS0 1516 aa14.04□□□□□ -0.16
NEK9-205ENST00000555405 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
NEK9-205ENST00000555405 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
NEK9-205ENST00000555405 CC2D1BQ5T0F9 858 aaKnown RBP14.02□□□□□ -0.17
NEK9-205ENST00000555405 PANK3Q9H999 370 aa14.02□□□□□ -0.17
NEK9-205ENST00000555405 MYOM2P54296 1465 aa14.02□□□□□ -0.17
NEK9-205ENST00000555405 SETD1BQ9UPS6 1966 aaKnown RBP14.01□□□□□ -0.17
NEK9-205ENST00000555405 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
NEK9-205ENST00000555405 KCNA6P17658 529 aa14.01□□□□□ -0.17
NEK9-205ENST00000555405 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
NEK9-205ENST00000555405 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
NEK9-205ENST00000555405 ADAMTSL3P82987 1691 aa14□□□□□ -0.17
NEK9-205ENST00000555405 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
NEK9-205ENST00000555405 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
NEK9-205ENST00000555405 CDCA8Q53HL2 280 aa13.99□□□□□ -0.17
NEK9-205ENST00000555405 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
NEK9-205ENST00000555405 ZFYVE9O95405 1425 aa13.99□□□□□ -0.17
NEK9-205ENST00000555405 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
NEK9-205ENST00000555405 EVC2Q86UK5 1308 aa13.98□□□□□ -0.17
NEK9-205ENST00000555405 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
NEK9-205ENST00000555405 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
NEK9-205ENST00000555405 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
NEK9-205ENST00000555405 PPLO60437 1756 aa13.97□□□□□ -0.17
NEK9-205ENST00000555405 PROSER2Q86WR7 435 aaPredicted RBP13.97□□□□□ -0.17
NEK9-205ENST00000555405 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
NEK9-205ENST00000555405 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.17
NEK9-205ENST00000555405 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
NEK9-205ENST00000555405 ALKQ9UM73 1620 aa13.96□□□□□ -0.18
NEK9-205ENST00000555405 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
NEK9-205ENST00000555405 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
NEK9-205ENST00000555405 PMFBP1Q8TBY8 1022 aa13.94□□□□□ -0.18
NEK9-205ENST00000555405 NRXN1Q9ULB1 1477 aa13.93□□□□□ -0.18
NEK9-205ENST00000555405 LRPPRCP42704 1394 aaKnown RBP13.93□□□□□ -0.18
NEK9-205ENST00000555405 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
NEK9-205ENST00000555405 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
NEK9-205ENST00000555405 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
NEK9-205ENST00000555405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
NEK9-205ENST00000555405 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
NEK9-205ENST00000555405 SOX12O15370 315 aa13.91□□□□□ -0.18
NEK9-205ENST00000555405 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
NEK9-205ENST00000555405 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
NEK9-205ENST00000555405 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
NEK9-205ENST00000555405 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
NEK9-205ENST00000555405 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
NEK9-205ENST00000555405 ADGRB1O14514 1584 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms