RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 DNAJB2P25686 324 aa14.21□□□□□ -0.13
VRK1-203ENST00000555067 MLLT3P42568 568 aaPredicted RBP14.21□□□□□ -0.13
VRK1-203ENST00000555067 PTGDRQ13258 359 aa14.21□□□□□ -0.13
VRK1-203ENST00000555067 SLC19A1P41440 591 aa14.2□□□□□ -0.14
VRK1-203ENST00000555067 TMEM134Q9H6X4 195 aa14.19□□□□□ -0.14
VRK1-203ENST00000555067 TLL1O43897 1013 aa14.17□□□□□ -0.14
VRK1-203ENST00000555067 SPRYD7Q5W111 196 aa14.17□□□□□ -0.14
VRK1-203ENST00000555067 ARHGEF1Q92888 912 aaKnown RBP14.17□□□□□ -0.14
VRK1-203ENST00000555067 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
VRK1-203ENST00000555067 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
VRK1-203ENST00000555067 ACTN4O43707 911 aaKnown RBP14.15□□□□□ -0.14
VRK1-203ENST00000555067 PRR20EP86478 221 aa14.15□□□□□ -0.14
VRK1-203ENST00000555067 PRR20CP86479 221 aa14.15□□□□□ -0.14
VRK1-203ENST00000555067 PRR20DP86480 221 aa14.15□□□□□ -0.14
VRK1-203ENST00000555067 PRR20BP86481 221 aa14.15□□□□□ -0.14
VRK1-203ENST00000555067 PRR20AP86496 221 aa14.15□□□□□ -0.14
VRK1-203ENST00000555067 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
VRK1-203ENST00000555067 ZNF775Q96BV0 537 aaPredicted RBP14.15□□□□□ -0.14
VRK1-203ENST00000555067 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
VRK1-203ENST00000555067 RCCD1A6NED2 376 aa14.11□□□□□ -0.15
VRK1-203ENST00000555067 DGAT1O75907 488 aa14.11□□□□□ -0.15
VRK1-203ENST00000555067 MYT1Q01538 1121 aa14.11□□□□□ -0.15
VRK1-203ENST00000555067 KMT5BQ4FZB7 885 aa14.11□□□□□ -0.15
VRK1-203ENST00000555067 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
VRK1-203ENST00000555067 S1PR4O95977 384 aa14.1□□□□□ -0.15
VRK1-203ENST00000555067 LIAT1Q6ZQX7 453 aa14.1□□□□□ -0.15
VRK1-203ENST00000555067 PPEF1O14829 653 aaPredicted RBP14.09□□□□□ -0.15
VRK1-203ENST00000555067 KCNV2Q8TDN2 545 aa14.09□□□□□ -0.15
VRK1-203ENST00000555067 CFHP08603 1231 aa14.08□□□□□ -0.16
VRK1-203ENST00000555067 SLC10A3P09131 477 aa14.07□□□□□ -0.16
VRK1-203ENST00000555067 PKDCCQ504Y2 493 aa14.07□□□□□ -0.16
VRK1-203ENST00000555067 GDF9O60383 454 aa14.06□□□□□ -0.16
VRK1-203ENST00000555067 ADH1BP00325 375 aa14.06□□□□□ -0.16
VRK1-203ENST00000555067 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
VRK1-203ENST00000555067 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
VRK1-203ENST00000555067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
VRK1-203ENST00000555067 NR1I2O75469 434 aa14.01□□□□□ -0.17
VRK1-203ENST00000555067 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
VRK1-203ENST00000555067 PLA2G2CQ5R387 149 aa14.01□□□□□ -0.17
VRK1-203ENST00000555067 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
VRK1-203ENST00000555067 POTECB2RU33 542 aa13.99□□□□□ -0.17
VRK1-203ENST00000555067 PXYLP1Q8TE99 480 aa13.98□□□□□ -0.17
VRK1-203ENST00000555067 SLC6A16Q9GZN6 736 aa13.98□□□□□ -0.17
VRK1-203ENST00000555067 FCHSD2O94868 740 aa13.97□□□□□ -0.17
VRK1-203ENST00000555067 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
VRK1-203ENST00000555067 TNFRSF10AO00220 468 aa13.96□□□□□ -0.17
VRK1-203ENST00000555067 SCUBE3Q8IX30 993 aa13.96□□□□□ -0.17
VRK1-203ENST00000555067 OATP04181 439 aa13.92□□□□□ -0.18
VRK1-203ENST00000555067 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
VRK1-203ENST00000555067 PKD2L1Q9P0L9 805 aa13.91□□□□□ -0.18
VRK1-203ENST00000555067 PUS10Q3MIT2 529 aaKnown RBP13.9□□□□□ -0.18
VRK1-203ENST00000555067 LMOD2Q6P5Q4 547 aa13.9□□□□□ -0.18
VRK1-203ENST00000555067 AAASQ9NRG9 546 aa13.9□□□□□ -0.18
VRK1-203ENST00000555067 METTL3Q86U44 580 aaKnown RBP13.89□□□□□ -0.19
VRK1-203ENST00000555067 SPSB2Q99619 263 aa13.89□□□□□ -0.19
VRK1-203ENST00000555067 ST8SIA5O15466 376 aa13.87□□□□□ -0.19
VRK1-203ENST00000555067 LCE2AQ5TA79 106 aaPredicted RBP13.87□□□□□ -0.19
VRK1-203ENST00000555067 SEMA3EO15041 775 aa13.86□□□□□ -0.19
VRK1-203ENST00000555067 HIC1Q14526 733 aa13.86□□□□□ -0.19
VRK1-203ENST00000555067 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
VRK1-203ENST00000555067 CRIPAKQ8N1N5 446 aa13.85□□□□□ -0.19
VRK1-203ENST00000555067 RPIAP49247 311 aa13.84□□□□□ -0.19
VRK1-203ENST00000555067 MORN1Q5T089 497 aa13.83□□□□□ -0.2
VRK1-203ENST00000555067 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
VRK1-203ENST00000555067 AVPP01185 164 aa13.81□□□□□ -0.2
VRK1-203ENST00000555067 TOR4AQ9NXH8 423 aa13.81□□□□□ -0.2
VRK1-203ENST00000555067 FOXC1Q12948 553 aa13.8□□□□□ -0.2
VRK1-203ENST00000555067 TREML4Q6UXN2 200 aa13.8□□□□□ -0.2
VRK1-203ENST00000555067 DAXXQ9UER7 740 aaPredicted RBP13.8□□□□□ -0.2
VRK1-203ENST00000555067 FCF1Q9Y324 198 aaKnown RBP13.78□□□□□ -0.2
VRK1-203ENST00000555067 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.21
VRK1-203ENST00000555067 FAM160A2Q8N612 972 aaPredicted RBP13.77□□□□□ -0.21
VRK1-203ENST00000555067 FECHP22830 423 aa13.76□□□□□ -0.21
VRK1-203ENST00000555067 FUT2Q10981 343 aa13.76□□□□□ -0.21
VRK1-203ENST00000555067 DACH1Q9UI36 760 aa13.76□□□□□ -0.21
VRK1-203ENST00000555067 GPR37O15354 613 aa13.75□□□□□ -0.21
VRK1-203ENST00000555067 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
VRK1-203ENST00000555067 GNPATO15228 680 aa13.74□□□□□ -0.21
VRK1-203ENST00000555067 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
VRK1-203ENST00000555067 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
VRK1-203ENST00000555067 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
VRK1-203ENST00000555067 RDH13Q8NBN7 331 aa13.73□□□□□ -0.21
VRK1-203ENST00000555067 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
VRK1-203ENST00000555067 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
VRK1-203ENST00000555067 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
VRK1-203ENST00000555067 SMCPP49901 116 aaPredicted RBP13.71□□□□□ -0.21
VRK1-203ENST00000555067 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
VRK1-203ENST00000555067 GCGRP47871 477 aa13.7□□□□□ -0.22
VRK1-203ENST00000555067 CTC1Q2NKJ3 1217 aa13.7□□□□□ -0.22
VRK1-203ENST00000555067 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
VRK1-203ENST00000555067 CYP4X1Q8N118 509 aa13.7□□□□□ -0.22
VRK1-203ENST00000555067 PRDM9Q9NQV7 894 aa13.69□□□□□ -0.22
VRK1-203ENST00000555067 AXIN1O15169 862 aa13.68□□□□□ -0.22
VRK1-203ENST00000555067 GMPR2Q9P2T1 348 aaKnown RBP13.68□□□□□ -0.22
VRK1-203ENST00000555067 MSS51Q4VC12 460 aa13.67□□□□□ -0.22
VRK1-203ENST00000555067 NLRP7Q8WX94 980 aa13.67□□□□□ -0.22
VRK1-203ENST00000555067 PHOX2BQ99453 314 aa13.66□□□□□ -0.22
VRK1-203ENST00000555067 SULF1Q8IWU6 871 aa13.65□□□□□ -0.22
VRK1-203ENST00000555067 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
VRK1-203ENST00000555067 RNF19BQ6ZMZ0 732 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms