RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
SYNE2-216ENST00000555002 CDR1P51861 262 aa8.38□□□□□ -1.07
SYNE2-216ENST00000555002 CEP162Q5TB80 1403 aa8.38□□□□□ -1.07
SYNE2-216ENST00000555002 CCDC191Q8NCU4 936 aa8.38□□□□□ -1.07
SYNE2-216ENST00000555002 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
SYNE2-216ENST00000555002 CPLX2Q6PUV4 134 aaKnown RBP8.37□□□□□ -1.07
SYNE2-216ENST00000555002 ERICH2A1L162 156 aa8.37□□□□□ -1.07
SYNE2-216ENST00000555002 TRDNQ13061 729 aa8.37□□□□□ -1.07
SYNE2-216ENST00000555002 HSPA5P11021 654 aaKnown RBP8.37□□□□□ -1.07
SYNE2-216ENST00000555002 PKD2Q13563 968 aa8.37□□□□□ -1.07
SYNE2-216ENST00000555002 ANKRD62A6NC57 917 aa8.37□□□□□ -1.07
SYNE2-216ENST00000555002 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
SYNE2-216ENST00000555002 ANKRD45Q5TZF3 282 aa8.37□□□□□ -1.07
SYNE2-216ENST00000555002 NEXNQ0ZGT2 675 aa8.36□□□□□ -1.07
SYNE2-216ENST00000555002 ATP6V1DQ9Y5K8 247 aa8.36□□□□□ -1.07
SYNE2-216ENST00000555002 ATP2B2Q01814 1243 aa8.36□□□□□ -1.07
SYNE2-216ENST00000555002 VPS37CA5D8V6 355 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-216ENST00000555002 NEFHP12036 1026 aa8.36□□□□□ -1.07
SYNE2-216ENST00000555002 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-216ENST00000555002 SAFBQ15424 915 aaKnown RBP eCLIP8.36□□□□□ -1.07
SYNE2-216ENST00000555002 PLIN1O60240 522 aa8.35□□□□□ -1.07
SYNE2-216ENST00000555002 CCDC173Q0VFZ6 552 aa8.35□□□□□ -1.07
SYNE2-216ENST00000555002 ZRSR2Q15696 482 aaKnown RBP8.35□□□□□ -1.07
SYNE2-216ENST00000555002 MNS1Q8NEH6 495 aa8.35□□□□□ -1.07
SYNE2-216ENST00000555002 DCTN1Q14203 1278 aa8.35□□□□□ -1.07
SYNE2-216ENST00000555002 WDR70Q9NW82 654 aa8.35□□□□□ -1.07
SYNE2-216ENST00000555002 CHMP4CQ96CF2 233 aa8.34□□□□□ -1.07
SYNE2-216ENST00000555002 DDX49Q9Y6V7 483 aaKnown RBP8.34□□□□□ -1.07
SYNE2-216ENST00000555002 TEFQ10587 303 aa8.34□□□□□ -1.07
SYNE2-216ENST00000555002 RUFY2Q8WXA3 655 aa8.34□□□□□ -1.07
SYNE2-216ENST00000555002 RBM19Q9Y4C8 960 aaKnown RBP8.34□□□□□ -1.07
SYNE2-216ENST00000555002 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
SYNE2-216ENST00000555002 KRT18P05783 430 aaKnown RBP8.34□□□□□ -1.07
SYNE2-216ENST00000555002 IFT57Q9NWB7 429 aa8.34□□□□□ -1.07
SYNE2-216ENST00000555002 NOM1Q5C9Z4 860 aaKnown RBP8.33□□□□□ -1.08
SYNE2-216ENST00000555002 MYO6Q9UM54 1294 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
SYNE2-216ENST00000555002 CDK5RAP3Q96JB5 506 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 KIF27Q86VH2 1401 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 FAM177BA6PVY3 158 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 H0YHG0 523 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 G3BP1Q13283 466 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNE2-216ENST00000555002 TSPYL1Q9H0U9 437 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 BRMS1Q9HCU9 246 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 MATR3P43243 847 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNE2-216ENST00000555002 OLFM4Q6UX06 510 aa8.33□□□□□ -1.08
SYNE2-216ENST00000555002 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-216ENST00000555002 SEPT7Q16181 437 aaKnown RBP8.32□□□□□ -1.08
SYNE2-216ENST00000555002 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 WASHC4Q2M389 1173 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 HSP90AB3PQ58FF7 597 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 COG3Q96JB2 828 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 CHMP4BP1P59074 171 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 CCDC73Q6ZRK6 1079 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 RALBP1Q15311 655 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 ATP2B1P20020 1258 aa8.32□□□□□ -1.08
SYNE2-216ENST00000555002 SYCP1Q15431 976 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 HSP90B2PQ58FF3 399 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 NEBLO76041 1014 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 CGNL1Q0VF96 1302 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 ARHGAP35Q9NRY4 1499 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 SPDYE4A6NLX3 237 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 HSP90AB4PQ58FF6 505 aa8.31□□□□□ -1.08
SYNE2-216ENST00000555002 PSME1Q06323 249 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 RALYLQ86SE5 291 aaKnown RBP8.3□□□□□ -1.08
SYNE2-216ENST00000555002 SASS6Q6UVJ0 657 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 NEUROD6Q96NK8 337 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 WASHC2CQ9Y4E1 1318 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 BAZ1BQ9UIG0 1483 aaKnown RBP8.3□□□□□ -1.08
SYNE2-216ENST00000555002 SMC2O95347 1197 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 ZHX3Q9H4I2 956 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 SEPT11Q9NVA2 429 aaKnown RBP8.3□□□□□ -1.08
SYNE2-216ENST00000555002 MAGEC2Q9UBF1 373 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-216ENST00000555002 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-216ENST00000555002 CENPHQ9H3R5 247 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 ARGLU1Q9NWB6 273 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-216ENST00000555002 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
SYNE2-216ENST00000555002 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
SYNE2-216ENST00000555002 NUP155O75694 1391 aa8.29□□□□□ -1.08
SYNE2-216ENST00000555002 AIMP1Q12904 312 aaKnown RBP8.29□□□□□ -1.08
SYNE2-216ENST00000555002 AXDND1Q5T1B0 1012 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-216ENST00000555002 HMGN5P82970 282 aaKnown RBP8.29□□□□□ -1.08
SYNE2-216ENST00000555002 PDCL3Q9H2J4 239 aa8.29□□□□□ -1.08
SYNE2-216ENST00000555002 RNF20Q5VTR2 975 aa8.29□□□□□ -1.08
SYNE2-216ENST00000555002 MYCNP04198 464 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-216ENST00000555002 EZRP15311 586 aaKnown RBP8.29□□□□□ -1.08
SYNE2-216ENST00000555002 STK11IPQ8N1F8 1099 aa8.29□□□□□ -1.08
SYNE2-216ENST00000555002 MPHOSPH10O00566 681 aaKnown RBP8.28□□□□□ -1.08
SYNE2-216ENST00000555002 SSR1P43307 286 aaKnown RBP8.28□□□□□ -1.08
SYNE2-216ENST00000555002 WASHC2AQ641Q2 1341 aa8.28□□□□□ -1.08
SYNE2-216ENST00000555002 PSMD1Q99460 953 aa8.28□□□□□ -1.08
SYNE2-216ENST00000555002 RBM5P52756 815 aaKnown RBP eCLIP8.28□□□□□ -1.08
SYNE2-216ENST00000555002 SMC3Q9UQE7 1217 aa8.28□□□□□ -1.08
SYNE2-216ENST00000555002 IPO9Q96P70 1041 aaKnown RBP8.28□□□□□ -1.08
SYNE2-216ENST00000555002 NUTM2GQ5VZR2 741 aa8.28□□□□□ -1.08
SYNE2-216ENST00000555002 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
SYNE2-216ENST00000555002 KIF3BO15066 747 aa8.28□□□□□ -1.08
SYNE2-216ENST00000555002 ERLIN2O94905 339 aa8.28□□□□□ -1.08
SYNE2-216ENST00000555002 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms