RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 CTR9Q6PD62 1173 aa7.82□□□□□ -1.16
PCNX1-207ENST00000554691 CT47B1P0C2W7 299 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-207ENST00000554691 RGL3Q3MIN7 710 aa7.82□□□□□ -1.16
PCNX1-207ENST00000554691 CCDC94Q9BW85 323 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-207ENST00000554691 CCDC144AA2RUR9 1427 aa7.81□□□□□ -1.16
PCNX1-207ENST00000554691 MCTP1Q6DN14 999 aa7.81□□□□□ -1.16
PCNX1-207ENST00000554691 CGNQ9P2M7 1197 aaKnown RBP7.81□□□□□ -1.16
PCNX1-207ENST00000554691 AEBP2Q6ZN18 517 aaPredicted RBP7.81□□□□□ -1.16
PCNX1-207ENST00000554691 XRCC6P12956 609 aaKnown RBP eCLIP7.81□□□□□ -1.16
PCNX1-207ENST00000554691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.81□□□□□ -1.163e-6■□□□□ 10.4
PCNX1-207ENST00000554691 DEF6Q9H4E7 631 aa7.81□□□□□ -1.16
PCNX1-207ENST00000554691 COG6Q9Y2V7 657 aa7.81□□□□□ -1.16
PCNX1-207ENST00000554691 KCNJ4P48050 445 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 INTS3Q68E01 1043 aaKnown RBP7.8□□□□□ -1.16
PCNX1-207ENST00000554691 RBM25P49756 843 aaKnown RBP7.8□□□□□ -1.16
PCNX1-207ENST00000554691 DZIP1LQ8IYY4 767 aaKnown RBP7.8□□□□□ -1.16
PCNX1-207ENST00000554691 CCDC112Q8NEF3 446 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 ERCC4Q92889 916 aaPredicted RBP7.8□□□□□ -1.16
PCNX1-207ENST00000554691 TIGD1Q96MW7 591 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 ARID3CA6NKF2 412 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 K7ELQ4 463 aaPredicted RBP7.8□□□□□ -1.16
PCNX1-207ENST00000554691 CDC45O75419 566 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 MYOM3Q5VTT5 1437 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 LEKR1Q6ZMV7 388 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 PDS5BQ9NTI5 1447 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 ROCK1Q13464 1354 aa7.8□□□□□ -1.16
PCNX1-207ENST00000554691 BECN2A8MW95 431 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 HSP90B2PQ58FF3 399 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 FEZ1Q99689 392 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 HDAC5Q9UQL6 1122 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 ST20-MTHFSA0A0A6YYL1 179 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 TPM1P09493 284 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 UVSSAQ2YD98 709 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 MNS1Q8NEH6 495 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 NCOA1Q15788 1441 aa7.79□□□□□ -1.16
PCNX1-207ENST00000554691 CCDC70Q6NSX1 233 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 FGD1P98174 961 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 LMOD3Q0VAK6 560 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 KLHL40Q2TBA0 621 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 RSPH4AQ5TD94 716 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 FAM107BQ9H098 131 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 FAM193AP78312 1265 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 UTP14CQ5TAP6 766 aaKnown RBP7.78□□□□□ -1.16
PCNX1-207ENST00000554691 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
PCNX1-207ENST00000554691 NUP155O75694 1391 aa7.77□□□□□ -1.17
PCNX1-207ENST00000554691 ARAP1Q96P48 1450 aa7.77□□□□□ -1.17
PCNX1-207ENST00000554691 FYCO1Q9BQS8 1478 aa7.77□□□□□ -1.17
PCNX1-207ENST00000554691 PDZRN3Q9UPQ7 1066 aa7.77□□□□□ -1.17
PCNX1-207ENST00000554691 TIAM1Q13009 1591 aa7.77□□□□□ -1.17
PCNX1-207ENST00000554691 ZBTB7CA1YPR0 619 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 IRX3P78415 501 aaPredicted RBP7.76□□□□□ -1.17
PCNX1-207ENST00000554691 PANK3Q9H999 370 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 U2SURPO15042 1029 aaKnown RBP7.76□□□□□ -1.17
PCNX1-207ENST00000554691 RDXP35241 583 aaKnown RBP7.76□□□□□ -1.17
PCNX1-207ENST00000554691 GCC1Q96CN9 775 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 ZKSCAN5Q9Y2L8 839 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 CASKIN1Q8WXD9 1431 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 SCAPERQ9BY12 1400 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 SMARCA4P51532 1647 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 TPD52L1Q16890 204 aaPredicted RBP7.76□□□□□ -1.17
PCNX1-207ENST00000554691 RRAGDQ9NQL2 400 aaPredicted RBP7.76□□□□□ -1.17
PCNX1-207ENST00000554691 ZNF592Q92610 1267 aa7.76□□□□□ -1.17
PCNX1-207ENST00000554691 GABPB1Q06547 395 aaPredicted RBP7.75□□□□□ -1.17
PCNX1-207ENST00000554691 ANKRD45Q5TZF3 282 aa7.75□□□□□ -1.17
PCNX1-207ENST00000554691 TBC1D32Q96NH3 1257 aa7.75□□□□□ -1.17
PCNX1-207ENST00000554691 ZHX1Q9UKY1 873 aaPredicted RBP7.75□□□□□ -1.17
PCNX1-207ENST00000554691 EIF3JO75822 258 aaKnown RBP7.75□□□□□ -1.17
PCNX1-207ENST00000554691 CHGAP10645 457 aaKnown RBP7.75□□□□□ -1.17
PCNX1-207ENST00000554691 TBC1D2Q9BYX2 928 aa7.75□□□□□ -1.17
PCNX1-207ENST00000554691 NEMFO60524 1076 aa7.75□□□□□ -1.17
PCNX1-207ENST00000554691 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
PCNX1-207ENST00000554691 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.177e-6■■■□□ 18.2
PCNX1-207ENST00000554691 API5Q9BZZ5 524 aaKnown RBP7.75□□□□□ -1.17
PCNX1-207ENST00000554691 PRXQ9BXM0 1461 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 APAF1O14727 1248 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 TPRNQ4KMQ1 711 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 NAT10Q9H0A0 1025 aaKnown RBP7.74□□□□□ -1.17
PCNX1-207ENST00000554691 INSRP06213 1382 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 CCDC192P0DO97 292 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 CBX1P83916 185 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 HOMER1Q86YM7 354 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 RUNDC1Q96C34 613 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 GPATCH3Q96I76 525 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 ZMYM3Q14202 1370 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 WDR33Q9C0J8 1336 aaKnown RBP7.74□□□□□ -1.17
PCNX1-207ENST00000554691 PRPF40AO75400 957 aaKnown RBP7.74□□□□□ -1.17
PCNX1-207ENST00000554691 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.74□□□□□ -1.17
PCNX1-207ENST00000554691 PLEKHH1Q9ULM0 1364 aa7.74□□□□□ -1.17
PCNX1-207ENST00000554691 GNL2Q13823 731 aaKnown RBP7.73□□□□□ -1.17
PCNX1-207ENST00000554691 FOXD1Q16676 465 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 PPP4R3BQ5MIZ7 849 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 KRT222Q8N1A0 295 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 PAXBP1Q9Y5B6 917 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 EFCAB5A4FU69 1503 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 KANK1Q14678 1352 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 TUBB4AP04350 444 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 SNX21Q969T3 373 aa7.73□□□□□ -1.17
PCNX1-207ENST00000554691 ERLIN1O75477 346 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms