RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
MTHFD1-207ENST00000554677 E9PCH4 1651 aa18.84■□□□□ 0.61
MTHFD1-207ENST00000554677 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
MTHFD1-207ENST00000554677 CHD2O14647 1828 aaKnown RBP18.82■□□□□ 0.6
MTHFD1-207ENST00000554677 PROSER2Q86WR7 435 aaPredicted RBP18.82■□□□□ 0.6
MTHFD1-207ENST00000554677 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
MTHFD1-207ENST00000554677 FAM135BQ49AJ0 1406 aa18.81■□□□□ 0.6
MTHFD1-207ENST00000554677 RIMS2Q9UQ26 1411 aa18.81■□□□□ 0.6
MTHFD1-207ENST00000554677 NWD1Q149M9 1564 aa18.81■□□□□ 0.6
MTHFD1-207ENST00000554677 IQGAP3Q86VI3 1631 aa18.8■□□□□ 0.6
MTHFD1-207ENST00000554677 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
MTHFD1-207ENST00000554677 ITGAEP38570 1179 aa18.77■□□□□ 0.6
MTHFD1-207ENST00000554677 BCANQ96GW7 911 aa18.77■□□□□ 0.6
MTHFD1-207ENST00000554677 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.59
MTHFD1-207ENST00000554677 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
MTHFD1-207ENST00000554677 TBX22Q9Y458 520 aa18.76■□□□□ 0.59
MTHFD1-207ENST00000554677 NUP155O75694 1391 aa18.76■□□□□ 0.59
MTHFD1-207ENST00000554677 CHGAP10645 457 aaKnown RBP18.75■□□□□ 0.59
MTHFD1-207ENST00000554677 ROBO1Q9Y6N7 1651 aa18.74■□□□□ 0.59
MTHFD1-207ENST00000554677 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
MTHFD1-207ENST00000554677 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
MTHFD1-207ENST00000554677 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
MTHFD1-207ENST00000554677 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
MTHFD1-207ENST00000554677 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
MTHFD1-207ENST00000554677 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
MTHFD1-207ENST00000554677 SLAIN2Q9P270 581 aa18.7■□□□□ 0.58
MTHFD1-207ENST00000554677 MSH6P52701 1360 aa18.69■□□□□ 0.58
MTHFD1-207ENST00000554677 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
MTHFD1-207ENST00000554677 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
MTHFD1-207ENST00000554677 DIP2AQ14689 1571 aa18.65■□□□□ 0.58
MTHFD1-207ENST00000554677 PIK3R4Q99570 1358 aa18.65■□□□□ 0.58
MTHFD1-207ENST00000554677 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
MTHFD1-207ENST00000554677 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
MTHFD1-207ENST00000554677 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
MTHFD1-207ENST00000554677 NRXN3Q9Y4C0 1643 aa18.63■□□□□ 0.57
MTHFD1-207ENST00000554677 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
MTHFD1-207ENST00000554677 AMOTL2Q9Y2J4 779 aa18.62■□□□□ 0.57
MTHFD1-207ENST00000554677 NAIPQ13075 1403 aa18.61■□□□□ 0.57
MTHFD1-207ENST00000554677 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
MTHFD1-207ENST00000554677 TRPM2O94759 1503 aa18.6■□□□□ 0.57
MTHFD1-207ENST00000554677 POTEAQ6S8J7 498 aa18.6■□□□□ 0.57
MTHFD1-207ENST00000554677 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
MTHFD1-207ENST00000554677 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
MTHFD1-207ENST00000554677 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
MTHFD1-207ENST00000554677 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
MTHFD1-207ENST00000554677 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
MTHFD1-207ENST00000554677 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
MTHFD1-207ENST00000554677 XRN1Q8IZH2 1706 aaKnown RBP18.56■□□□□ 0.56
MTHFD1-207ENST00000554677 METP08581 1390 aa18.55■□□□□ 0.56
MTHFD1-207ENST00000554677 JCADQ9P266 1359 aa18.55■□□□□ 0.56
MTHFD1-207ENST00000554677 KIF1BO60333 1816 aa18.55■□□□□ 0.56
MTHFD1-207ENST00000554677 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
MTHFD1-207ENST00000554677 ATF3P18847 181 aa18.54■□□□□ 0.56
MTHFD1-207ENST00000554677 AHDC1Q5TGY3 1603 aaPredicted RBP18.52■□□□□ 0.55
MTHFD1-207ENST00000554677 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
MTHFD1-207ENST00000554677 HFM1A2PYH4 1435 aa18.5■□□□□ 0.55
MTHFD1-207ENST00000554677 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
MTHFD1-207ENST00000554677 LRP6O75581 1613 aa18.49■□□□□ 0.55
MTHFD1-207ENST00000554677 DCCP43146 1447 aa18.49■□□□□ 0.55
MTHFD1-207ENST00000554677 SETD1AO15047 1707 aaKnown RBP18.47■□□□□ 0.55
MTHFD1-207ENST00000554677 MST1RQ04912 1400 aa18.47■□□□□ 0.55
MTHFD1-207ENST00000554677 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
MTHFD1-207ENST00000554677 SPATA31A6Q5VVP1 1343 aa18.47■□□□□ 0.55
MTHFD1-207ENST00000554677 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
MTHFD1-207ENST00000554677 ASXL1Q8IXJ9 1541 aa18.44■□□□□ 0.54
MTHFD1-207ENST00000554677 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
MTHFD1-207ENST00000554677 ADGRL3Q9HAR2 1447 aa18.43■□□□□ 0.54
MTHFD1-207ENST00000554677 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
MTHFD1-207ENST00000554677 PPLO60437 1756 aa18.42■□□□□ 0.54
MTHFD1-207ENST00000554677 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
MTHFD1-207ENST00000554677 RPGRIP1LQ68CZ1 1315 aa18.42■□□□□ 0.54
MTHFD1-207ENST00000554677 FOXD1Q16676 465 aa18.41■□□□□ 0.54
MTHFD1-207ENST00000554677 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
MTHFD1-207ENST00000554677 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
MTHFD1-207ENST00000554677 ROBO2Q9HCK4 1378 aa18.4■□□□□ 0.54
MTHFD1-207ENST00000554677 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
MTHFD1-207ENST00000554677 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
MTHFD1-207ENST00000554677 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
MTHFD1-207ENST00000554677 C1orf167Q5SNV9 1468 aa18.37■□□□□ 0.53
MTHFD1-207ENST00000554677 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
MTHFD1-207ENST00000554677 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
MTHFD1-207ENST00000554677 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
MTHFD1-207ENST00000554677 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
MTHFD1-207ENST00000554677 LRRC59Q96AG4 307 aaKnown RBP18.36■□□□□ 0.53
MTHFD1-207ENST00000554677 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
MTHFD1-207ENST00000554677 MPHOSPH9Q99550 1183 aa18.34■□□□□ 0.53
MTHFD1-207ENST00000554677 LAMC1P11047 1609 aa18.34■□□□□ 0.53
MTHFD1-207ENST00000554677 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
MTHFD1-207ENST00000554677 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
MTHFD1-207ENST00000554677 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
MTHFD1-207ENST00000554677 IFT172Q9UG01 1749 aa18.31■□□□□ 0.52
MTHFD1-207ENST00000554677 SOS2Q07890 1332 aaPredicted RBP18.3■□□□□ 0.52
MTHFD1-207ENST00000554677 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
MTHFD1-207ENST00000554677 AFF2P51816 1311 aa18.29■□□□□ 0.52
MTHFD1-207ENST00000554677 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
MTHFD1-207ENST00000554677 RXRBP28702 533 aa18.28■□□□□ 0.52
MTHFD1-207ENST00000554677 WAPLQ7Z5K2 1190 aa18.26■□□□□ 0.51
MTHFD1-207ENST00000554677 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
MTHFD1-207ENST00000554677 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
MTHFD1-207ENST00000554677 TECPR2O15040 1411 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms