RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 LTKP29376 864 aa26.87■■□□□ 1.89
PSEN1-210ENST00000554131 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
PSEN1-210ENST00000554131 MED14O60244 1454 aa26.85■■□□□ 1.89
PSEN1-210ENST00000554131 RGL3Q3MIN7 710 aa26.84■■□□□ 1.89
PSEN1-210ENST00000554131 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
PSEN1-210ENST00000554131 RPGRIP1LQ68CZ1 1315 aa26.84■■□□□ 1.89
PSEN1-210ENST00000554131 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
PSEN1-210ENST00000554131 NCKAP5LQ9HCH0 1330 aa26.83■■□□□ 1.89
PSEN1-210ENST00000554131 TXNDC2Q86VQ3 553 aa26.81■■□□□ 1.88
PSEN1-210ENST00000554131 ANKLE2Q86XL3 938 aa26.81■■□□□ 1.88
PSEN1-210ENST00000554131 NEUROD1Q13562 356 aa26.8■■□□□ 1.88
PSEN1-210ENST00000554131 MYOM2P54296 1465 aa26.79■■□□□ 1.88
PSEN1-210ENST00000554131 NRXN3Q9Y4C0 1643 aa26.79■■□□□ 1.88
PSEN1-210ENST00000554131 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
PSEN1-210ENST00000554131 IQGAP1P46940 1657 aa26.78■■□□□ 1.88
PSEN1-210ENST00000554131 NRXN1Q9ULB1 1477 aa26.77■■□□□ 1.88
PSEN1-210ENST00000554131 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
PSEN1-210ENST00000554131 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.77■■□□□ 1.88
PSEN1-210ENST00000554131 EID1Q9Y6B2 187 aa26.77■■□□□ 1.88
PSEN1-210ENST00000554131 NPHP4O75161 1426 aaPredicted RBP26.76■■□□□ 1.87
PSEN1-210ENST00000554131 SETBP1Q9Y6X0 1596 aa26.75■■□□□ 1.87
PSEN1-210ENST00000554131 ADGRF5Q8IZF2 1346 aa26.73■■□□□ 1.87
PSEN1-210ENST00000554131 HDGFP51858 240 aaKnown RBP26.73■■□□□ 1.87
PSEN1-210ENST00000554131 L3MBTL2Q969R5 705 aa26.73■■□□□ 1.87
PSEN1-210ENST00000554131 SETD1AO15047 1707 aaKnown RBP26.71■■□□□ 1.87
PSEN1-210ENST00000554131 VGFO15240 615 aaPredicted RBP26.71■■□□□ 1.87
PSEN1-210ENST00000554131 ADAMTS13Q76LX8 1427 aa26.71■■□□□ 1.87
PSEN1-210ENST00000554131 PIK3C2GO75747 1445 aa26.7■■□□□ 1.86
PSEN1-210ENST00000554131 PPP1R15AO75807 674 aaPredicted RBP26.69■■□□□ 1.86
PSEN1-210ENST00000554131 DCAF11Q8TEB1 546 aa26.69■■□□□ 1.86
PSEN1-210ENST00000554131 STAC3Q96MF2 364 aa26.66■■□□□ 1.86
PSEN1-210ENST00000554131 TONSLQ96HA7 1378 aa26.66■■□□□ 1.86
PSEN1-210ENST00000554131 DIP2AQ14689 1571 aa26.66■■□□□ 1.86
PSEN1-210ENST00000554131 ALKQ9UM73 1620 aa26.65■■□□□ 1.86
PSEN1-210ENST00000554131 PRAG1Q86YV5 1406 aa26.64■■□□□ 1.85
PSEN1-210ENST00000554131 KDM2AQ9Y2K7 1162 aa26.63■■□□□ 1.85
PSEN1-210ENST00000554131 SENP3Q9H4L4 574 aaPredicted RBP26.62■■□□□ 1.85
PSEN1-210ENST00000554131 DMRT2Q9Y5R5 561 aa26.62■■□□□ 1.85
PSEN1-210ENST00000554131 ASXL1Q8IXJ9 1541 aa26.6■■□□□ 1.85
PSEN1-210ENST00000554131 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
PSEN1-210ENST00000554131 TIMELESSQ9UNS1 1208 aa26.6■■□□□ 1.85
PSEN1-210ENST00000554131 LAMC1P11047 1609 aa26.6■■□□□ 1.85
PSEN1-210ENST00000554131 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
PSEN1-210ENST00000554131 KIAA1210Q9ULL0 1709 aa26.58■■□□□ 1.85
PSEN1-210ENST00000554131 STRCP1A6NGW2 1772 aa26.56■■□□□ 1.84
PSEN1-210ENST00000554131 C14orf93Q9H972 538 aaKnown RBP26.56■■□□□ 1.84
PSEN1-210ENST00000554131 METP08581 1390 aa26.56■■□□□ 1.84
PSEN1-210ENST00000554131 CHD2O14647 1828 aaKnown RBP26.55■■□□□ 1.84
PSEN1-210ENST00000554131 TRPM1Q7Z4N2 1603 aa26.55■■□□□ 1.84
PSEN1-210ENST00000554131 ADGRB1O14514 1584 aa26.54■■□□□ 1.84
PSEN1-210ENST00000554131 NWD1Q149M9 1564 aa26.54■■□□□ 1.84
PSEN1-210ENST00000554131 NBPF8Q3BBV2 869 aa26.54■■□□□ 1.84
PSEN1-210ENST00000554131 BCANQ96GW7 911 aa26.54■■□□□ 1.84
PSEN1-210ENST00000554131 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
PSEN1-210ENST00000554131 PTPRUQ92729 1446 aa26.53■■□□□ 1.84
PSEN1-210ENST00000554131 PIK3R4Q99570 1358 aa26.52■■□□□ 1.84
PSEN1-210ENST00000554131 XRN1Q8IZH2 1706 aaKnown RBP26.51■■□□□ 1.83
PSEN1-210ENST00000554131 ZNF335Q9H4Z2 1342 aaPredicted RBP26.48■■□□□ 1.83
PSEN1-210ENST00000554131 LTBP4Q8N2S1 1624 aa26.48■■□□□ 1.83
PSEN1-210ENST00000554131 RALGAPBQ86X10 1494 aa26.45■■□□□ 1.82
PSEN1-210ENST00000554131 KNDC1Q76NI1 1749 aa26.45■■□□□ 1.82
PSEN1-210ENST00000554131 TMEM132EQ6IEE7 984 aa26.44■■□□□ 1.82
PSEN1-210ENST00000554131 KCNA6P17658 529 aa26.43■■□□□ 1.82
PSEN1-210ENST00000554131 NBPF1Q3BBV0 1214 aa26.43■■□□□ 1.82
PSEN1-210ENST00000554131 YTHDC2Q9H6S0 1430 aaKnown RBP26.42■■□□□ 1.82
PSEN1-210ENST00000554131 LRPPRCP42704 1394 aaKnown RBP26.42■■□□□ 1.82
PSEN1-210ENST00000554131 TECPR2O15040 1411 aa26.41■■□□□ 1.82
PSEN1-210ENST00000554131 GPRASP1Q5JY77 1395 aa26.41■■□□□ 1.82
PSEN1-210ENST00000554131 NKTRP30414 1462 aaKnown RBP26.41■■□□□ 1.82
PSEN1-210ENST00000554131 CPS1P31327 1500 aa26.4■■□□□ 1.82
PSEN1-210ENST00000554131 AMOTL2Q9Y2J4 779 aa26.39■■□□□ 1.82
PSEN1-210ENST00000554131 ABCC11Q96J66 1382 aa26.38■■□□□ 1.81
PSEN1-210ENST00000554131 PTCH1Q13635 1447 aa26.37■■□□□ 1.81
PSEN1-210ENST00000554131 XIRP1Q702N8 1843 aaKnown RBP26.37■■□□□ 1.81
PSEN1-210ENST00000554131 DLC1Q96QB1 1528 aa26.36■■□□□ 1.81
PSEN1-210ENST00000554131 ROBO2Q9HCK4 1378 aa26.35■■□□□ 1.81
PSEN1-210ENST00000554131 LRRC7Q96NW7 1537 aa26.35■■□□□ 1.81
PSEN1-210ENST00000554131 ARHGEF28Q8N1W1 1705 aaKnown RBP26.35■■□□□ 1.81
PSEN1-210ENST00000554131 ROCK2O75116 1388 aaKnown RBP26.34■■□□□ 1.81
PSEN1-210ENST00000554131 STK26Q9P289 416 aa26.31■■□□□ 1.8
PSEN1-210ENST00000554131 FAM135BQ49AJ0 1406 aa26.3■■□□□ 1.8
PSEN1-210ENST00000554131 SIRT1Q96EB6 747 aa26.28■■□□□ 1.8
PSEN1-210ENST00000554131 PLEKHH1Q9ULM0 1364 aa26.27■■□□□ 1.8
PSEN1-210ENST00000554131 TMEM94Q12767 1356 aa26.26■■□□□ 1.79
PSEN1-210ENST00000554131 TRAK1Q9UPV9 953 aa26.26■■□□□ 1.79
PSEN1-210ENST00000554131 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.25■■□□□ 1.79
PSEN1-210ENST00000554131 NALCNQ8IZF0 1738 aa26.25■■□□□ 1.79
PSEN1-210ENST00000554131 PROSER2Q86WR7 435 aaPredicted RBP26.24■■□□□ 1.79
PSEN1-210ENST00000554131 RBM33Q96EV2 1170 aaKnown RBP26.24■■□□□ 1.79
PSEN1-210ENST00000554131 CARD11Q9BXL7 1154 aa26.24■■□□□ 1.79
PSEN1-210ENST00000554131 NCOA3Q9Y6Q9 1424 aa26.23■■□□□ 1.79
PSEN1-210ENST00000554131 WAPLQ7Z5K2 1190 aa26.23■■□□□ 1.79
PSEN1-210ENST00000554131 PRAM1Q96QH2 718 aa26.2■■□□□ 1.78
PSEN1-210ENST00000554131 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
PSEN1-210ENST00000554131 ADGRL3Q9HAR2 1447 aa26.18■■□□□ 1.78
PSEN1-210ENST00000554131 QRICH2Q9H0J4 1663 aa26.18■■□□□ 1.78
PSEN1-210ENST00000554131 ADGRB2O60241 1585 aa26.17■■□□□ 1.78
PSEN1-210ENST00000554131 CERKQ8TCT0 537 aa26.15■■□□□ 1.78
PSEN1-210ENST00000554131 USP47Q96K76 1375 aa26.14■■□□□ 1.78
PSEN1-210ENST00000554131 EIF3AQ14152 1382 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms