RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 CHGAP10645 457 aaKnown RBP16.31■□□□□ 0.2
PNN-203ENST00000554117 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
PNN-203ENST00000554117 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
PNN-203ENST00000554117 NUP155O75694 1391 aa16.29■□□□□ 0.2
PNN-203ENST00000554117 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
PNN-203ENST00000554117 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
PNN-203ENST00000554117 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
PNN-203ENST00000554117 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
PNN-203ENST00000554117 HSPA1LP34931 641 aa16.27■□□□□ 0.2
PNN-203ENST00000554117 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
PNN-203ENST00000554117 ROBO1Q9Y6N7 1651 aa16.26■□□□□ 0.19
PNN-203ENST00000554117 KCNA6P17658 529 aa16.25■□□□□ 0.19
PNN-203ENST00000554117 SLC26A8Q96RN1 970 aa16.25■□□□□ 0.19
PNN-203ENST00000554117 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
PNN-203ENST00000554117 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
PNN-203ENST00000554117 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
PNN-203ENST00000554117 PHLPP1O60346 1717 aa16.24■□□□□ 0.19
PNN-203ENST00000554117 TRPM2O94759 1503 aa16.24■□□□□ 0.19
PNN-203ENST00000554117 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
PNN-203ENST00000554117 MSH6P52701 1360 aa16.23■□□□□ 0.19
PNN-203ENST00000554117 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
PNN-203ENST00000554117 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
PNN-203ENST00000554117 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
PNN-203ENST00000554117 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
PNN-203ENST00000554117 TMEM94Q12767 1356 aa16.2■□□□□ 0.18
PNN-203ENST00000554117 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
PNN-203ENST00000554117 SOCS7O14512 581 aa16.19■□□□□ 0.18
PNN-203ENST00000554117 ZNF326Q5BKZ1 582 aaKnown RBP16.19■□□□□ 0.18
PNN-203ENST00000554117 CLTCL1P53675 1640 aa16.18■□□□□ 0.18
PNN-203ENST00000554117 SETD1AO15047 1707 aaKnown RBP16.17■□□□□ 0.18
PNN-203ENST00000554117 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
PNN-203ENST00000554117 ILDR2Q71H61 639 aa16.16■□□□□ 0.18
PNN-203ENST00000554117 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
PNN-203ENST00000554117 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
PNN-203ENST00000554117 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
PNN-203ENST00000554117 PPLO60437 1756 aa16.15■□□□□ 0.18
PNN-203ENST00000554117 NCOA3Q9Y6Q9 1424 aa16.14■□□□□ 0.17
PNN-203ENST00000554117 NAIPQ13075 1403 aa16.13■□□□□ 0.17
PNN-203ENST00000554117 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
PNN-203ENST00000554117 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
PNN-203ENST00000554117 NRXN3Q9Y4C0 1643 aa16.12■□□□□ 0.17
PNN-203ENST00000554117 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
PNN-203ENST00000554117 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
PNN-203ENST00000554117 ATF3P18847 181 aa16.1■□□□□ 0.17
PNN-203ENST00000554117 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
PNN-203ENST00000554117 RBM33Q96EV2 1170 aaKnown RBP16.09■□□□□ 0.17
PNN-203ENST00000554117 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
PNN-203ENST00000554117 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
PNN-203ENST00000554117 ADAMTS13Q76LX8 1427 aa16.08■□□□□ 0.16
PNN-203ENST00000554117 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
PNN-203ENST00000554117 SLAIN2Q9P270 581 aa16.07■□□□□ 0.16
PNN-203ENST00000554117 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
PNN-203ENST00000554117 NALCNQ8IZF0 1738 aa16.06■□□□□ 0.16
PNN-203ENST00000554117 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
PNN-203ENST00000554117 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
PNN-203ENST00000554117 AMOTL2Q9Y2J4 779 aa16.05■□□□□ 0.16
PNN-203ENST00000554117 COL16A1Q07092 1604 aaPredicted RBP16.04■□□□□ 0.16
PNN-203ENST00000554117 VGFO15240 615 aaPredicted RBP16.03■□□□□ 0.16
PNN-203ENST00000554117 DCCP43146 1447 aa16.02■□□□□ 0.16
PNN-203ENST00000554117 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.16
PNN-203ENST00000554117 AHDC1Q5TGY3 1603 aaPredicted RBP16.02■□□□□ 0.16
PNN-203ENST00000554117 JCADQ9P266 1359 aa16.01■□□□□ 0.15
PNN-203ENST00000554117 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
PNN-203ENST00000554117 CCDC144AA2RUR9 1427 aa15.99■□□□□ 0.15
PNN-203ENST00000554117 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
PNN-203ENST00000554117 KNDC1Q76NI1 1749 aa15.97■□□□□ 0.15
PNN-203ENST00000554117 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
PNN-203ENST00000554117 LAMC1P11047 1609 aa15.96■□□□□ 0.15
PNN-203ENST00000554117 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
PNN-203ENST00000554117 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
PNN-203ENST00000554117 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
PNN-203ENST00000554117 METP08581 1390 aa15.93■□□□□ 0.14
PNN-203ENST00000554117 PTCH1Q13635 1447 aa15.93■□□□□ 0.14
PNN-203ENST00000554117 MARF1Q9Y4F3 1742 aaKnown RBP15.91■□□□□ 0.14
PNN-203ENST00000554117 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
PNN-203ENST00000554117 MST1RQ04912 1400 aa15.9■□□□□ 0.14
PNN-203ENST00000554117 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
PNN-203ENST00000554117 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
PNN-203ENST00000554117 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
PNN-203ENST00000554117 RGL3Q3MIN7 710 aa15.88■□□□□ 0.13
PNN-203ENST00000554117 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
PNN-203ENST00000554117 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
PNN-203ENST00000554117 FOXD1Q16676 465 aa15.87■□□□□ 0.13
PNN-203ENST00000554117 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
PNN-203ENST00000554117 CDC42BPGQ6DT37 1551 aa15.87■□□□□ 0.13
PNN-203ENST00000554117 KIF1AQ12756 1690 aa15.86■□□□□ 0.13
PNN-203ENST00000554117 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
PNN-203ENST00000554117 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
PNN-203ENST00000554117 NUTM2BA6NNL0 878 aaPredicted RBP15.83■□□□□ 0.12
PNN-203ENST00000554117 NUTM2EB1AL46 878 aaPredicted RBP15.83■□□□□ 0.12
PNN-203ENST00000554117 NUTM2AQ8IVF1 878 aaPredicted RBP15.83■□□□□ 0.12
PNN-203ENST00000554117 C1orf167Q5SNV9 1468 aa15.83■□□□□ 0.12
PNN-203ENST00000554117 RGS17Q9UGC6 210 aaPredicted RBP15.82■□□□□ 0.12
PNN-203ENST00000554117 LRP6O75581 1613 aa15.82■□□□□ 0.12
PNN-203ENST00000554117 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
PNN-203ENST00000554117 LRPPRCP42704 1394 aaKnown RBP15.8■□□□□ 0.12
PNN-203ENST00000554117 ROBO2Q9HCK4 1378 aa15.8■□□□□ 0.12
PNN-203ENST00000554117 POTEAQ6S8J7 498 aa15.8■□□□□ 0.12
PNN-203ENST00000554117 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
PNN-203ENST00000554117 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms