RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
PABPN1-203ENST00000553960 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
PABPN1-203ENST00000553960 TNRQ92752 1358 aa15.4■□□□□ 0.06
PABPN1-203ENST00000553960 RGL3Q3MIN7 710 aa15.38■□□□□ 0.05
PABPN1-203ENST00000553960 FBXO31Q5XUX0 539 aaPredicted RBP15.38■□□□□ 0.05
PABPN1-203ENST00000553960 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
PABPN1-203ENST00000553960 C14orf93Q9H972 538 aaKnown RBP15.37■□□□□ 0.05
PABPN1-203ENST00000553960 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
PABPN1-203ENST00000553960 USP47Q96K76 1375 aa15.36■□□□□ 0.05
PABPN1-203ENST00000553960 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
PABPN1-203ENST00000553960 UBR1Q8IWV7 1749 aa15.36■□□□□ 0.05
PABPN1-203ENST00000553960 SLIT1O75093 1534 aa15.36■□□□□ 0.05
PABPN1-203ENST00000553960 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
PABPN1-203ENST00000553960 SCAF11Q99590 1463 aaKnown RBP15.35■□□□□ 0.05
PABPN1-203ENST00000553960 ARHGAP23Q9P227 1491 aa15.35■□□□□ 0.05
PABPN1-203ENST00000553960 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.35■□□□□ 0.05
PABPN1-203ENST00000553960 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
PABPN1-203ENST00000553960 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
PABPN1-203ENST00000553960 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
PABPN1-203ENST00000553960 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.04
PABPN1-203ENST00000553960 CARD11Q9BXL7 1154 aa15.33■□□□□ 0.04
PABPN1-203ENST00000553960 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
PABPN1-203ENST00000553960 MLECQ14165 292 aa15.32■□□□□ 0.04
PABPN1-203ENST00000553960 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
PABPN1-203ENST00000553960 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
PABPN1-203ENST00000553960 TMEM2Q9UHN6 1383 aa15.31■□□□□ 0.04
PABPN1-203ENST00000553960 RIMS2Q9UQ26 1411 aa15.29■□□□□ 0.04
PABPN1-203ENST00000553960 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
PABPN1-203ENST00000553960 NBPF1Q3BBV0 1214 aa15.29■□□□□ 0.04
PABPN1-203ENST00000553960 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
PABPN1-203ENST00000553960 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
PABPN1-203ENST00000553960 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
PABPN1-203ENST00000553960 RIMS1Q86UR5 1692 aaKnown RBP15.28■□□□□ 0.04
PABPN1-203ENST00000553960 CCDC7Q96M83 1385 aa15.27■□□□□ 0.04
PABPN1-203ENST00000553960 ZNF326Q5BKZ1 582 aaKnown RBP15.27■□□□□ 0.04
PABPN1-203ENST00000553960 TESK2Q96S53 571 aa15.27■□□□□ 0.04
PABPN1-203ENST00000553960 MED14O60244 1454 aa15.27■□□□□ 0.03
PABPN1-203ENST00000553960 SIRT1Q96EB6 747 aa15.26■□□□□ 0.03
PABPN1-203ENST00000553960 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
PABPN1-203ENST00000553960 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
PABPN1-203ENST00000553960 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
PABPN1-203ENST00000553960 CEP170BQ9Y4F5 1589 aaPredicted RBP15.25■□□□□ 0.03
PABPN1-203ENST00000553960 THEMISQ8N1K5 641 aaPredicted RBP15.25■□□□□ 0.03
PABPN1-203ENST00000553960 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
PABPN1-203ENST00000553960 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
PABPN1-203ENST00000553960 PTPRMP28827 1452 aa15.24■□□□□ 0.03
PABPN1-203ENST00000553960 TECPR2O15040 1411 aa15.24■□□□□ 0.03
PABPN1-203ENST00000553960 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
PABPN1-203ENST00000553960 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
PABPN1-203ENST00000553960 CFAP70Q5T0N1 1121 aa15.23■□□□□ 0.03
PABPN1-203ENST00000553960 ASXL1Q8IXJ9 1541 aa15.22■□□□□ 0.03
PABPN1-203ENST00000553960 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
PABPN1-203ENST00000553960 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
PABPN1-203ENST00000553960 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
PABPN1-203ENST00000553960 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
PABPN1-203ENST00000553960 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
PABPN1-203ENST00000553960 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
PABPN1-203ENST00000553960 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
PABPN1-203ENST00000553960 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
PABPN1-203ENST00000553960 ARHGEF28Q8N1W1 1705 aaKnown RBP15.19■□□□□ 0.02
PABPN1-203ENST00000553960 LRPPRCP42704 1394 aaKnown RBP15.19■□□□□ 0.02
PABPN1-203ENST00000553960 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
PABPN1-203ENST00000553960 CEBPAP49715 358 aaPredicted RBP15.18■□□□□ 0.02
PABPN1-203ENST00000553960 ADAMTS13Q76LX8 1427 aa15.17■□□□□ 0.02
PABPN1-203ENST00000553960 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
PABPN1-203ENST00000553960 TBX22Q9Y458 520 aa15.17■□□□□ 0.02
PABPN1-203ENST00000553960 TMF1P82094 1093 aa15.16■□□□□ 0.02
PABPN1-203ENST00000553960 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
PABPN1-203ENST00000553960 CPS1P31327 1500 aa15.15■□□□□ 0.02
PABPN1-203ENST00000553960 CENPJQ9HC77 1338 aaPredicted RBP15.15■□□□□ 0.02
PABPN1-203ENST00000553960 KTN1Q86UP2 1357 aaKnown RBP15.13■□□□□ 0.01
PABPN1-203ENST00000553960 LTKP29376 864 aa15.12■□□□□ 0.01
PABPN1-203ENST00000553960 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
PABPN1-203ENST00000553960 QRICH2Q9H0J4 1663 aa15.11■□□□□ 0.01
PABPN1-203ENST00000553960 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
PABPN1-203ENST00000553960 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
PABPN1-203ENST00000553960 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
PABPN1-203ENST00000553960 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
PABPN1-203ENST00000553960 NPC1L1Q9UHC9 1359 aa15.1■□□□□ 0.01
PABPN1-203ENST00000553960 PTCH1Q13635 1447 aa15.09■□□□□ 0.01
PABPN1-203ENST00000553960 ADGRB2O60241 1585 aa15.08■□□□□ 0
PABPN1-203ENST00000553960 ANKLE2Q86XL3 938 aa15.08■□□□□ 0
PABPN1-203ENST00000553960 METP08581 1390 aa15.08■□□□□ 0
PABPN1-203ENST00000553960 XRN1Q8IZH2 1706 aaKnown RBP15.07■□□□□ 0
PABPN1-203ENST00000553960 CCER2I3L3R5 266 aa15.07■□□□□ 0
PABPN1-203ENST00000553960 PER1O15534 1290 aaPredicted RBP15.06■□□□□ 0
PABPN1-203ENST00000553960 TMEM132EQ6IEE7 984 aa15.06■□□□□ 0
PABPN1-203ENST00000553960 MYOM1P52179 1685 aa15.06■□□□□ 0
PABPN1-203ENST00000553960 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
PABPN1-203ENST00000553960 EVC2Q86UK5 1308 aa15.04■□□□□ -0
PABPN1-203ENST00000553960 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
PABPN1-203ENST00000553960 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
PABPN1-203ENST00000553960 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
PABPN1-203ENST00000553960 ATAD2Q6PL18 1390 aa15.02■□□□□ -0
PABPN1-203ENST00000553960 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
PABPN1-203ENST00000553960 MIER1Q8N108 512 aa15.02■□□□□ -0
PABPN1-203ENST00000553960 USP32Q8NFA0 1604 aa15.01□□□□□ -0.01
PABPN1-203ENST00000553960 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
PABPN1-203ENST00000553960 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
PABPN1-203ENST00000553960 PTPRUQ92729 1446 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms