RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
NEK9-202ENST00000553823 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
NEK9-202ENST00000553823 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
NEK9-202ENST00000553823 MYOM2P54296 1465 aa16.73■□□□□ 0.27
NEK9-202ENST00000553823 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
NEK9-202ENST00000553823 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
NEK9-202ENST00000553823 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
NEK9-202ENST00000553823 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
NEK9-202ENST00000553823 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
NEK9-202ENST00000553823 PTPRMP28827 1452 aa16.69■□□□□ 0.26
NEK9-202ENST00000553823 UBR1Q8IWV7 1749 aa16.69■□□□□ 0.26
NEK9-202ENST00000553823 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
NEK9-202ENST00000553823 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
NEK9-202ENST00000553823 NRXN1Q9ULB1 1477 aa16.67■□□□□ 0.26
NEK9-202ENST00000553823 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
NEK9-202ENST00000553823 ZFYVE9O95405 1425 aa16.67■□□□□ 0.26
NEK9-202ENST00000553823 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
NEK9-202ENST00000553823 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
NEK9-202ENST00000553823 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
NEK9-202ENST00000553823 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.26
NEK9-202ENST00000553823 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
NEK9-202ENST00000553823 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
NEK9-202ENST00000553823 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
NEK9-202ENST00000553823 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
NEK9-202ENST00000553823 CEP170BQ9Y4F5 1589 aaPredicted RBP16.63■□□□□ 0.25
NEK9-202ENST00000553823 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
NEK9-202ENST00000553823 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
NEK9-202ENST00000553823 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
NEK9-202ENST00000553823 NBPF1Q3BBV0 1214 aa16.62■□□□□ 0.25
NEK9-202ENST00000553823 LAMC1P11047 1609 aa16.62■□□□□ 0.25
NEK9-202ENST00000553823 ZNF142P52746 1687 aaPredicted RBP16.62■□□□□ 0.25
NEK9-202ENST00000553823 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
NEK9-202ENST00000553823 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
NEK9-202ENST00000553823 THEMISQ8N1K5 641 aaPredicted RBP16.61■□□□□ 0.25
NEK9-202ENST00000553823 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
NEK9-202ENST00000553823 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
NEK9-202ENST00000553823 C14orf93Q9H972 538 aaKnown RBP16.59■□□□□ 0.25
NEK9-202ENST00000553823 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
NEK9-202ENST00000553823 USP47Q96K76 1375 aa16.58■□□□□ 0.24
NEK9-202ENST00000553823 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
NEK9-202ENST00000553823 SLIT1O75093 1534 aa16.58■□□□□ 0.24
NEK9-202ENST00000553823 SETBP1Q9Y6X0 1596 aa16.56■□□□□ 0.24
NEK9-202ENST00000553823 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
NEK9-202ENST00000553823 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
NEK9-202ENST00000553823 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
NEK9-202ENST00000553823 IQGAP1P46940 1657 aa16.54■□□□□ 0.24
NEK9-202ENST00000553823 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
NEK9-202ENST00000553823 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
NEK9-202ENST00000553823 LTKP29376 864 aa16.53■□□□□ 0.24
NEK9-202ENST00000553823 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
NEK9-202ENST00000553823 ADGRB1O14514 1584 aa16.52■□□□□ 0.24
NEK9-202ENST00000553823 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.23
NEK9-202ENST00000553823 PLEKHG1Q9ULL1 1385 aa16.51■□□□□ 0.23
NEK9-202ENST00000553823 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
NEK9-202ENST00000553823 SETD1AO15047 1707 aaKnown RBP16.5■□□□□ 0.23
NEK9-202ENST00000553823 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
NEK9-202ENST00000553823 BCANQ96GW7 911 aa16.49■□□□□ 0.23
NEK9-202ENST00000553823 ASXL1Q8IXJ9 1541 aa16.49■□□□□ 0.23
NEK9-202ENST00000553823 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
NEK9-202ENST00000553823 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
NEK9-202ENST00000553823 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
NEK9-202ENST00000553823 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
NEK9-202ENST00000553823 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
NEK9-202ENST00000553823 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
NEK9-202ENST00000553823 MED14O60244 1454 aa16.44■□□□□ 0.22
NEK9-202ENST00000553823 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
NEK9-202ENST00000553823 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
NEK9-202ENST00000553823 METP08581 1390 aa16.42■□□□□ 0.22
NEK9-202ENST00000553823 LRPPRCP42704 1394 aaKnown RBP16.42■□□□□ 0.22
NEK9-202ENST00000553823 TESK2Q96S53 571 aa16.42■□□□□ 0.22
NEK9-202ENST00000553823 STK26Q9P289 416 aa16.42■□□□□ 0.22
NEK9-202ENST00000553823 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
NEK9-202ENST00000553823 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
NEK9-202ENST00000553823 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
NEK9-202ENST00000553823 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
NEK9-202ENST00000553823 CENPJQ9HC77 1338 aaPredicted RBP16.41■□□□□ 0.22
NEK9-202ENST00000553823 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
NEK9-202ENST00000553823 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
NEK9-202ENST00000553823 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
NEK9-202ENST00000553823 ABCC11Q96J66 1382 aa16.39■□□□□ 0.21
NEK9-202ENST00000553823 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
NEK9-202ENST00000553823 NPHP4O75161 1426 aaPredicted RBP16.39■□□□□ 0.21
NEK9-202ENST00000553823 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
NEK9-202ENST00000553823 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.21
NEK9-202ENST00000553823 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
NEK9-202ENST00000553823 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
NEK9-202ENST00000553823 TMF1P82094 1093 aa16.38■□□□□ 0.21
NEK9-202ENST00000553823 NCKAP5LQ9HCH0 1330 aa16.38■□□□□ 0.21
NEK9-202ENST00000553823 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
NEK9-202ENST00000553823 TECPR2O15040 1411 aa16.36■□□□□ 0.21
NEK9-202ENST00000553823 HSPA2P54652 639 aa16.36■□□□□ 0.21
NEK9-202ENST00000553823 PIK3R4Q99570 1358 aa16.36■□□□□ 0.21
NEK9-202ENST00000553823 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
NEK9-202ENST00000553823 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
NEK9-202ENST00000553823 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
NEK9-202ENST00000553823 POGKQ9P215 609 aa16.35■□□□□ 0.21
NEK9-202ENST00000553823 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
NEK9-202ENST00000553823 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
NEK9-202ENST00000553823 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
NEK9-202ENST00000553823 CPS1P31327 1500 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms