RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
RDH11-205ENST00000553816 FBXO31Q5XUX0 539 aaPredicted RBP12.54□□□□□ -0.4
RDH11-205ENST00000553816 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
RDH11-205ENST00000553816 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
RDH11-205ENST00000553816 PZPP20742 1482 aa12.53□□□□□ -0.4
RDH11-205ENST00000553816 ROCK1Q13464 1354 aa12.53□□□□□ -0.4
RDH11-205ENST00000553816 UNC13BO14795 1591 aa12.52□□□□□ -0.4
RDH11-205ENST00000553816 CEP170BQ9Y4F5 1589 aaPredicted RBP12.52□□□□□ -0.41
RDH11-205ENST00000553816 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
RDH11-205ENST00000553816 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
RDH11-205ENST00000553816 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
RDH11-205ENST00000553816 LMTK2Q8IWU2 1503 aa12.49□□□□□ -0.41
RDH11-205ENST00000553816 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
RDH11-205ENST00000553816 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
RDH11-205ENST00000553816 TNRQ92752 1358 aa12.48□□□□□ -0.41
RDH11-205ENST00000553816 TET3O43151 1660 aa12.48□□□□□ -0.41
RDH11-205ENST00000553816 IQGAP3Q86VI3 1631 aa12.48□□□□□ -0.41
RDH11-205ENST00000553816 EFCAB6Q5THR3 1501 aa12.47□□□□□ -0.41
RDH11-205ENST00000553816 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
RDH11-205ENST00000553816 E9PCH4 1651 aa12.47□□□□□ -0.41
RDH11-205ENST00000553816 NAIPQ13075 1403 aa12.46□□□□□ -0.41
RDH11-205ENST00000553816 ARHGAP31Q2M1Z3 1444 aa12.46□□□□□ -0.41
RDH11-205ENST00000553816 KANK1Q14678 1352 aa12.46□□□□□ -0.41
RDH11-205ENST00000553816 A2ML1A8K2U0 1454 aa12.46□□□□□ -0.42
RDH11-205ENST00000553816 SYNMO15061 1565 aa12.45□□□□□ -0.42
RDH11-205ENST00000553816 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
RDH11-205ENST00000553816 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
RDH11-205ENST00000553816 POLR1AO95602 1720 aaPredicted RBP12.43□□□□□ -0.42
RDH11-205ENST00000553816 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
RDH11-205ENST00000553816 NLRP1Q9C000 1473 aa12.42□□□□□ -0.42
RDH11-205ENST00000553816 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
RDH11-205ENST00000553816 UGGT1Q9NYU2 1555 aa12.42□□□□□ -0.42
RDH11-205ENST00000553816 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
RDH11-205ENST00000553816 NOS1P29475 1434 aa12.41□□□□□ -0.42
RDH11-205ENST00000553816 NUP155O75694 1391 aa12.41□□□□□ -0.42
RDH11-205ENST00000553816 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.42
RDH11-205ENST00000553816 PLA2R1Q13018 1463 aa12.4□□□□□ -0.43
RDH11-205ENST00000553816 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
RDH11-205ENST00000553816 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
RDH11-205ENST00000553816 RPRD2Q5VT52 1461 aaKnown RBP12.39□□□□□ -0.43
RDH11-205ENST00000553816 SPHKAPQ2M3C7 1700 aa12.38□□□□□ -0.43
RDH11-205ENST00000553816 KDM5AP29375 1690 aaKnown RBP12.37□□□□□ -0.43
RDH11-205ENST00000553816 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
RDH11-205ENST00000553816 IDI1Q13907 227 aa12.36□□□□□ -0.43
RDH11-205ENST00000553816 PTPRTO14522 1441 aa12.36□□□□□ -0.43
RDH11-205ENST00000553816 THEMISQ8N1K5 641 aaPredicted RBP12.35□□□□□ -0.43
RDH11-205ENST00000553816 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
RDH11-205ENST00000553816 ADGRB3O60242 1522 aa12.34□□□□□ -0.43
RDH11-205ENST00000553816 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
RDH11-205ENST00000553816 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
RDH11-205ENST00000553816 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
RDH11-205ENST00000553816 SLIT1O75093 1534 aa12.33□□□□□ -0.44
RDH11-205ENST00000553816 IQGAP1P46940 1657 aa12.33□□□□□ -0.44
RDH11-205ENST00000553816 PKD2Q13563 968 aa12.33□□□□□ -0.44
RDH11-205ENST00000553816 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
RDH11-205ENST00000553816 CLTCL1P53675 1640 aa12.31□□□□□ -0.44
RDH11-205ENST00000553816 LTBP4Q8N2S1 1624 aa12.31□□□□□ -0.44
RDH11-205ENST00000553816 POTEMA6NI47 508 aa12.31□□□□□ -0.44
RDH11-205ENST00000553816 LTKP29376 864 aa12.31□□□□□ -0.44
RDH11-205ENST00000553816 MED14O60244 1454 aa12.31□□□□□ -0.44
RDH11-205ENST00000553816 SETD5Q9C0A6 1442 aa12.3□□□□□ -0.44
RDH11-205ENST00000553816 ANKLE2Q86XL3 938 aa12.3□□□□□ -0.44
RDH11-205ENST00000553816 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
RDH11-205ENST00000553816 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
RDH11-205ENST00000553816 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
RDH11-205ENST00000553816 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
RDH11-205ENST00000553816 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
RDH11-205ENST00000553816 SCAF11Q99590 1463 aaKnown RBP12.28□□□□□ -0.44
RDH11-205ENST00000553816 KIF1BO60333 1816 aa12.28□□□□□ -0.44
RDH11-205ENST00000553816 TRPM2O94759 1503 aa12.28□□□□□ -0.44
RDH11-205ENST00000553816 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
RDH11-205ENST00000553816 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
RDH11-205ENST00000553816 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
RDH11-205ENST00000553816 POTEGQ6S5H5 508 aa12.26□□□□□ -0.45
RDH11-205ENST00000553816 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
RDH11-205ENST00000553816 ZFYVE9O95405 1425 aa12.26□□□□□ -0.45
RDH11-205ENST00000553816 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
RDH11-205ENST00000553816 CERKQ8TCT0 537 aa12.24□□□□□ -0.45
RDH11-205ENST00000553816 MPHOSPH9Q99550 1183 aa12.24□□□□□ -0.45
RDH11-205ENST00000553816 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
RDH11-205ENST00000553816 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
RDH11-205ENST00000553816 NUTM2DQ5VT03 806 aaPredicted RBP12.22□□□□□ -0.45
RDH11-205ENST00000553816 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
RDH11-205ENST00000553816 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
RDH11-205ENST00000553816 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
RDH11-205ENST00000553816 XIRP1Q702N8 1843 aaKnown RBP12.22□□□□□ -0.45
RDH11-205ENST00000553816 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
RDH11-205ENST00000553816 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.46
RDH11-205ENST00000553816 NRXN3Q9Y4C0 1643 aa12.2□□□□□ -0.46
RDH11-205ENST00000553816 PPLO60437 1756 aa12.2□□□□□ -0.46
RDH11-205ENST00000553816 CHD2O14647 1828 aaKnown RBP12.19□□□□□ -0.46
RDH11-205ENST00000553816 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
RDH11-205ENST00000553816 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
RDH11-205ENST00000553816 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
RDH11-205ENST00000553816 CPS1P31327 1500 aa12.17□□□□□ -0.46
RDH11-205ENST00000553816 FBXO41Q8TF61 875 aa12.17□□□□□ -0.46
RDH11-205ENST00000553816 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
RDH11-205ENST00000553816 ADAMTS13Q76LX8 1427 aa12.16□□□□□ -0.46
RDH11-205ENST00000553816 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
RDH11-205ENST00000553816 SETD1AO15047 1707 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms