RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
CNOT2-242ENST00000553020 CPS1P31327 1500 aa14.04□□□□□ -0.16
CNOT2-242ENST00000553020 KIF3BO15066 747 aa14.03□□□□□ -0.16
CNOT2-242ENST00000553020 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
CNOT2-242ENST00000553020 CEP152O94986 1710 aa14.02□□□□□ -0.16
CNOT2-242ENST00000553020 E9PCH4 1651 aa14.02□□□□□ -0.16
CNOT2-242ENST00000553020 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.16
CNOT2-242ENST00000553020 PLA2R1Q13018 1463 aa14.02□□□□□ -0.16
CNOT2-242ENST00000553020 NEFLP07196 543 aa14.02□□□□□ -0.17
CNOT2-242ENST00000553020 RGL3Q3MIN7 710 aa14.02□□□□□ -0.17
CNOT2-242ENST00000553020 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
CNOT2-242ENST00000553020 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
CNOT2-242ENST00000553020 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
CNOT2-242ENST00000553020 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
CNOT2-242ENST00000553020 RNF17Q9BXT8 1623 aaKnown RBP14□□□□□ -0.17
CNOT2-242ENST00000553020 SETBP1Q9Y6X0 1596 aa14□□□□□ -0.17
CNOT2-242ENST00000553020 EFCAB6Q5THR3 1501 aa14□□□□□ -0.17
CNOT2-242ENST00000553020 LMTK2Q8IWU2 1503 aa14□□□□□ -0.17
CNOT2-242ENST00000553020 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
CNOT2-242ENST00000553020 C3P01024 1663 aa13.99□□□□□ -0.17
CNOT2-242ENST00000553020 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
CNOT2-242ENST00000553020 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
CNOT2-242ENST00000553020 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
CNOT2-242ENST00000553020 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
CNOT2-242ENST00000553020 MRS2Q9HD23 443 aa13.96□□□□□ -0.17
CNOT2-242ENST00000553020 CLTCL1P53675 1640 aa13.96□□□□□ -0.17
CNOT2-242ENST00000553020 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
CNOT2-242ENST00000553020 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
CNOT2-242ENST00000553020 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
CNOT2-242ENST00000553020 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-242ENST00000553020 TMF1P82094 1093 aa13.94□□□□□ -0.18
CNOT2-242ENST00000553020 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
CNOT2-242ENST00000553020 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
CNOT2-242ENST00000553020 MYOM2P54296 1465 aa13.93□□□□□ -0.18
CNOT2-242ENST00000553020 KIF1BO60333 1816 aa13.92□□□□□ -0.18
CNOT2-242ENST00000553020 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
CNOT2-242ENST00000553020 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
CNOT2-242ENST00000553020 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
CNOT2-242ENST00000553020 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
CNOT2-242ENST00000553020 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.19
CNOT2-242ENST00000553020 RALBP1Q15311 655 aa13.89□□□□□ -0.19
CNOT2-242ENST00000553020 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
CNOT2-242ENST00000553020 GGT6Q6P531 493 aa13.87□□□□□ -0.19
CNOT2-242ENST00000553020 ESF1Q9H501 851 aaKnown RBP13.87□□□□□ -0.19
CNOT2-242ENST00000553020 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
CNOT2-242ENST00000553020 ABCC3O15438 1527 aa13.86□□□□□ -0.19
CNOT2-242ENST00000553020 IQGAP1P46940 1657 aa13.86□□□□□ -0.19
CNOT2-242ENST00000553020 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
CNOT2-242ENST00000553020 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
CNOT2-242ENST00000553020 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
CNOT2-242ENST00000553020 YY1P25490 414 aa13.85□□□□□ -0.19
CNOT2-242ENST00000553020 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
CNOT2-242ENST00000553020 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
CNOT2-242ENST00000553020 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
CNOT2-242ENST00000553020 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
CNOT2-242ENST00000553020 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
CNOT2-242ENST00000553020 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
CNOT2-242ENST00000553020 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
CNOT2-242ENST00000553020 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
CNOT2-242ENST00000553020 NPATQ14207 1427 aa13.82□□□□□ -0.2
CNOT2-242ENST00000553020 SYNMO15061 1565 aa13.81□□□□□ -0.2
CNOT2-242ENST00000553020 RXRBP28702 533 aa13.81□□□□□ -0.2
CNOT2-242ENST00000553020 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
CNOT2-242ENST00000553020 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
CNOT2-242ENST00000553020 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
CNOT2-242ENST00000553020 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
CNOT2-242ENST00000553020 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
CNOT2-242ENST00000553020 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
CNOT2-242ENST00000553020 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
CNOT2-242ENST00000553020 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
CNOT2-242ENST00000553020 FKBP8Q14318 412 aa13.78□□□□□ -0.2
CNOT2-242ENST00000553020 TESK2Q96S53 571 aa13.78□□□□□ -0.2
CNOT2-242ENST00000553020 NOS1P29475 1434 aa13.78□□□□□ -0.2
CNOT2-242ENST00000553020 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
CNOT2-242ENST00000553020 REREQ9P2R6 1566 aa13.78□□□□□ -0.2
CNOT2-242ENST00000553020 ZNF142P52746 1687 aaPredicted RBP13.78□□□□□ -0.2
CNOT2-242ENST00000553020 NRXN1Q9ULB1 1477 aa13.77□□□□□ -0.21
CNOT2-242ENST00000553020 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
CNOT2-242ENST00000553020 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
CNOT2-242ENST00000553020 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
CNOT2-242ENST00000553020 PPLO60437 1756 aa13.75□□□□□ -0.21
CNOT2-242ENST00000553020 LRP5O75197 1615 aa13.75□□□□□ -0.21
CNOT2-242ENST00000553020 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
CNOT2-242ENST00000553020 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
CNOT2-242ENST00000553020 SLC52A1Q9NWF4 448 aa13.74□□□□□ -0.21
CNOT2-242ENST00000553020 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
CNOT2-242ENST00000553020 AGLP35573 1532 aa13.74□□□□□ -0.21
CNOT2-242ENST00000553020 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
CNOT2-242ENST00000553020 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CNOT2-242ENST00000553020 ERICH6BQ5W0A0 696 aa13.73□□□□□ -0.21
CNOT2-242ENST00000553020 PANK3Q9H999 370 aa13.73□□□□□ -0.21
CNOT2-242ENST00000553020 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
CNOT2-242ENST00000553020 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
CNOT2-242ENST00000553020 CENPJQ9HC77 1338 aaPredicted RBP13.72□□□□□ -0.21
CNOT2-242ENST00000553020 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
CNOT2-242ENST00000553020 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-242ENST00000553020 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-242ENST00000553020 NUTM2DQ5VT03 806 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-242ENST00000553020 NUTM2AQ8IVF1 878 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-242ENST00000553020 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms