RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 NUP155O75694 1391 aa21.01■□□□□ 0.95
SMARCC2-212ENST00000552566 NUTM2DQ5VT03 806 aaPredicted RBP21■□□□□ 0.95
SMARCC2-212ENST00000552566 RIMS2Q9UQ26 1411 aa20.99■□□□□ 0.95
SMARCC2-212ENST00000552566 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
SMARCC2-212ENST00000552566 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMARCC2-212ENST00000552566 PLEKHG1Q9ULL1 1385 aa20.96■□□□□ 0.95
SMARCC2-212ENST00000552566 TET3O43151 1660 aa20.96■□□□□ 0.95
SMARCC2-212ENST00000552566 KDM5AP29375 1690 aaKnown RBP20.96■□□□□ 0.95
SMARCC2-212ENST00000552566 MED1Q15648 1581 aaPredicted RBP20.95■□□□□ 0.94
SMARCC2-212ENST00000552566 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
SMARCC2-212ENST00000552566 UNC13BO14795 1591 aa20.94■□□□□ 0.94
SMARCC2-212ENST00000552566 TBX22Q9Y458 520 aa20.91■□□□□ 0.94
SMARCC2-212ENST00000552566 FAM135BQ49AJ0 1406 aa20.89■□□□□ 0.94
SMARCC2-212ENST00000552566 MSH6P52701 1360 aa20.89■□□□□ 0.93
SMARCC2-212ENST00000552566 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
SMARCC2-212ENST00000552566 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
SMARCC2-212ENST00000552566 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
SMARCC2-212ENST00000552566 TMEM131LA2VDJ0 1609 aa20.87■□□□□ 0.93
SMARCC2-212ENST00000552566 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
SMARCC2-212ENST00000552566 IQGAP3Q86VI3 1631 aa20.86■□□□□ 0.93
SMARCC2-212ENST00000552566 SLAIN2Q9P270 581 aa20.85■□□□□ 0.93
SMARCC2-212ENST00000552566 E9PCH4 1651 aa20.85■□□□□ 0.93
SMARCC2-212ENST00000552566 GCC2Q8IWJ2 1684 aa20.85■□□□□ 0.93
SMARCC2-212ENST00000552566 NWD1Q149M9 1564 aa20.83■□□□□ 0.92
SMARCC2-212ENST00000552566 ADAMTS13Q76LX8 1427 aa20.82■□□□□ 0.92
SMARCC2-212ENST00000552566 RRBP1Q9P2E9 1410 aaKnown RBP20.82■□□□□ 0.92
SMARCC2-212ENST00000552566 TRIM52Q96A61 297 aa20.81■□□□□ 0.92
SMARCC2-212ENST00000552566 AMOTL2Q9Y2J4 779 aa20.8■□□□□ 0.92
SMARCC2-212ENST00000552566 XIRP1Q702N8 1843 aaKnown RBP20.8■□□□□ 0.92
SMARCC2-212ENST00000552566 NAIPQ13075 1403 aa20.78■□□□□ 0.92
SMARCC2-212ENST00000552566 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
SMARCC2-212ENST00000552566 ATF3P18847 181 aa20.77■□□□□ 0.92
SMARCC2-212ENST00000552566 C19orf44Q9H6X5 657 aa20.76■□□□□ 0.91
SMARCC2-212ENST00000552566 RGS17Q9UGC6 210 aaPredicted RBP20.75■□□□□ 0.91
SMARCC2-212ENST00000552566 NCOA3Q9Y6Q9 1424 aa20.75■□□□□ 0.91
SMARCC2-212ENST00000552566 CADPS2Q86UW7 1296 aa20.74■□□□□ 0.91
SMARCC2-212ENST00000552566 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
SMARCC2-212ENST00000552566 ROBO1Q9Y6N7 1651 aa20.73■□□□□ 0.91
SMARCC2-212ENST00000552566 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
SMARCC2-212ENST00000552566 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
SMARCC2-212ENST00000552566 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
SMARCC2-212ENST00000552566 TRPM2O94759 1503 aa20.71■□□□□ 0.91
SMARCC2-212ENST00000552566 METP08581 1390 aa20.7■□□□□ 0.9
SMARCC2-212ENST00000552566 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
SMARCC2-212ENST00000552566 JCADQ9P266 1359 aa20.69■□□□□ 0.9
SMARCC2-212ENST00000552566 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
SMARCC2-212ENST00000552566 CHD2O14647 1828 aaKnown RBP20.67■□□□□ 0.9
SMARCC2-212ENST00000552566 POTEAQ6S8J7 498 aa20.66■□□□□ 0.9
SMARCC2-212ENST00000552566 SPHKAPQ2M3C7 1700 aa20.64■□□□□ 0.9
SMARCC2-212ENST00000552566 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
SMARCC2-212ENST00000552566 FOXD1Q16676 465 aa20.64■□□□□ 0.89
SMARCC2-212ENST00000552566 BRINP3Q76B58 766 aa20.64■□□□□ 0.89
SMARCC2-212ENST00000552566 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
SMARCC2-212ENST00000552566 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
SMARCC2-212ENST00000552566 MEX3CQ5U5Q3 659 aaKnown RBP20.62■□□□□ 0.89
SMARCC2-212ENST00000552566 NEXMIFQ5QGS0 1516 aa20.6■□□□□ 0.89
SMARCC2-212ENST00000552566 PHLPP1O60346 1717 aa20.59■□□□□ 0.89
SMARCC2-212ENST00000552566 NRXN3Q9Y4C0 1643 aa20.59■□□□□ 0.89
SMARCC2-212ENST00000552566 SPATA31A6Q5VVP1 1343 aa20.58■□□□□ 0.89
SMARCC2-212ENST00000552566 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.89
SMARCC2-212ENST00000552566 DCCP43146 1447 aa20.58■□□□□ 0.88
SMARCC2-212ENST00000552566 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.88
SMARCC2-212ENST00000552566 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
SMARCC2-212ENST00000552566 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
SMARCC2-212ENST00000552566 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
SMARCC2-212ENST00000552566 RGL3Q3MIN7 710 aa20.55■□□□□ 0.88
SMARCC2-212ENST00000552566 COL16A1Q07092 1604 aaPredicted RBP20.55■□□□□ 0.88
SMARCC2-212ENST00000552566 MST1RQ04912 1400 aa20.54■□□□□ 0.88
SMARCC2-212ENST00000552566 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
SMARCC2-212ENST00000552566 XRN1Q8IZH2 1706 aaKnown RBP20.54■□□□□ 0.88
SMARCC2-212ENST00000552566 DDX17Q92841 729 aaKnown RBP20.54■□□□□ 0.88
SMARCC2-212ENST00000552566 MPHOSPH9Q99550 1183 aa20.54■□□□□ 0.88
SMARCC2-212ENST00000552566 AHDC1Q5TGY3 1603 aaPredicted RBP20.53■□□□□ 0.88
SMARCC2-212ENST00000552566 ROBO2Q9HCK4 1378 aa20.52■□□□□ 0.88
SMARCC2-212ENST00000552566 LRP6O75581 1613 aa20.52■□□□□ 0.88
SMARCC2-212ENST00000552566 ASXL1Q8IXJ9 1541 aa20.51■□□□□ 0.87
SMARCC2-212ENST00000552566 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
SMARCC2-212ENST00000552566 ZNF772Q68DY9 489 aaPredicted RBP20.5■□□□□ 0.87
SMARCC2-212ENST00000552566 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
SMARCC2-212ENST00000552566 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
SMARCC2-212ENST00000552566 PTCH1Q13635 1447 aa20.47■□□□□ 0.87
SMARCC2-212ENST00000552566 STK26Q9P289 416 aa20.47■□□□□ 0.87
SMARCC2-212ENST00000552566 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
SMARCC2-212ENST00000552566 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
SMARCC2-212ENST00000552566 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
SMARCC2-212ENST00000552566 KIF1BO60333 1816 aa20.45■□□□□ 0.86
SMARCC2-212ENST00000552566 AFF2P51816 1311 aa20.42■□□□□ 0.86
SMARCC2-212ENST00000552566 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
SMARCC2-212ENST00000552566 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
SMARCC2-212ENST00000552566 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
SMARCC2-212ENST00000552566 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
SMARCC2-212ENST00000552566 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
SMARCC2-212ENST00000552566 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
SMARCC2-212ENST00000552566 ADAMTS2O95450 1211 aa20.4■□□□□ 0.86
SMARCC2-212ENST00000552566 RXRBP28702 533 aa20.4■□□□□ 0.86
SMARCC2-212ENST00000552566 ESCO1Q5FWF5 840 aa20.4■□□□□ 0.86
SMARCC2-212ENST00000552566 WAPLQ7Z5K2 1190 aa20.4■□□□□ 0.86
SMARCC2-212ENST00000552566 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.85
SMARCC2-212ENST00000552566 SHPRHQ149N8 1683 aa20.38■□□□□ 0.85
SMARCC2-212ENST00000552566 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms