RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 EVC2Q86UK5 1308 aa13.77□□□□□ -0.2
TGFBR1-209ENST00000552516 NCOA1Q15788 1441 aa13.77□□□□□ -0.2
TGFBR1-209ENST00000552516 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
TGFBR1-209ENST00000552516 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
TGFBR1-209ENST00000552516 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
TGFBR1-209ENST00000552516 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
TGFBR1-209ENST00000552516 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
TGFBR1-209ENST00000552516 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
TGFBR1-209ENST00000552516 C1orf115Q9H7X2 142 aa13.75□□□□□ -0.21
TGFBR1-209ENST00000552516 EIF2S2P20042 333 aaKnown RBP13.75□□□□□ -0.21
TGFBR1-209ENST00000552516 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
TGFBR1-209ENST00000552516 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
TGFBR1-209ENST00000552516 PDE4AP27815 886 aa13.74□□□□□ -0.21
TGFBR1-209ENST00000552516 NUP153P49790 1475 aaKnown RBP13.73□□□□□ -0.21
TGFBR1-209ENST00000552516 DEKP35659 375 aaKnown RBP13.73□□□□□ -0.21
TGFBR1-209ENST00000552516 FOXD4L6Q3SYB3 417 aaPredicted RBP13.73□□□□□ -0.21
TGFBR1-209ENST00000552516 FOXD4L3Q6VB84 417 aaPredicted RBP13.73□□□□□ -0.21
TGFBR1-209ENST00000552516 COG3Q96JB2 828 aa13.72□□□□□ -0.21
TGFBR1-209ENST00000552516 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
TGFBR1-209ENST00000552516 USP35Q9P2H5 1018 aa13.72□□□□□ -0.21
TGFBR1-209ENST00000552516 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
TGFBR1-209ENST00000552516 IDI1Q13907 227 aa13.71□□□□□ -0.21
TGFBR1-209ENST00000552516 GPATCH8Q9UKJ3 1502 aaKnown RBP13.71□□□□□ -0.21
TGFBR1-209ENST00000552516 NAP1L2Q9ULW6 460 aaPredicted RBP13.71□□□□□ -0.21
TGFBR1-209ENST00000552516 ATP10BO94823 1461 aa13.71□□□□□ -0.21
TGFBR1-209ENST00000552516 DCTN1Q14203 1278 aa13.71□□□□□ -0.22
TGFBR1-209ENST00000552516 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.22
TGFBR1-209ENST00000552516 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.22
TGFBR1-209ENST00000552516 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
TGFBR1-209ENST00000552516 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
TGFBR1-209ENST00000552516 DISP3Q9P2K9 1392 aa13.69□□□□□ -0.22
TGFBR1-209ENST00000552516 BECN1Q14457 450 aa13.69□□□□□ -0.22
TGFBR1-209ENST00000552516 ANKRD45Q5TZF3 282 aa13.69□□□□□ -0.22
TGFBR1-209ENST00000552516 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
TGFBR1-209ENST00000552516 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
TGFBR1-209ENST00000552516 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
TGFBR1-209ENST00000552516 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
TGFBR1-209ENST00000552516 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
TGFBR1-209ENST00000552516 CHMP3Q9Y3E7 222 aa13.67□□□□□ -0.22
TGFBR1-209ENST00000552516 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
TGFBR1-209ENST00000552516 CUL7Q14999 1698 aa13.66□□□□□ -0.22
TGFBR1-209ENST00000552516 NLRP6P59044 892 aa13.66□□□□□ -0.22
TGFBR1-209ENST00000552516 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
TGFBR1-209ENST00000552516 E9PSI1 815 aa13.65□□□□□ -0.22
TGFBR1-209ENST00000552516 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.23
TGFBR1-209ENST00000552516 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
TGFBR1-209ENST00000552516 KCNJ4P48050 445 aa13.64□□□□□ -0.23
TGFBR1-209ENST00000552516 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
TGFBR1-209ENST00000552516 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
TGFBR1-209ENST00000552516 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
TGFBR1-209ENST00000552516 PSME1Q06323 249 aa13.63□□□□□ -0.23
TGFBR1-209ENST00000552516 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
TGFBR1-209ENST00000552516 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
TGFBR1-209ENST00000552516 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
TGFBR1-209ENST00000552516 CCDC141Q6ZP82 1450 aa13.62□□□□□ -0.23
TGFBR1-209ENST00000552516 CD109Q6YHK3 1445 aa13.62□□□□□ -0.23
TGFBR1-209ENST00000552516 NME9Q86XW9 330 aa13.62□□□□□ -0.23
TGFBR1-209ENST00000552516 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
TGFBR1-209ENST00000552516 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
TGFBR1-209ENST00000552516 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
TGFBR1-209ENST00000552516 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
TGFBR1-209ENST00000552516 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
TGFBR1-209ENST00000552516 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
TGFBR1-209ENST00000552516 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
TGFBR1-209ENST00000552516 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
TGFBR1-209ENST00000552516 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
TGFBR1-209ENST00000552516 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
TGFBR1-209ENST00000552516 NPHP1O15259 732 aa13.6□□□□□ -0.23
TGFBR1-209ENST00000552516 STK31Q9BXU1 1019 aa13.6□□□□□ -0.23
TGFBR1-209ENST00000552516 ABTB2Q8N961 1025 aa13.6□□□□□ -0.23
TGFBR1-209ENST00000552516 ADGRL1O94910 1474 aa13.59□□□□□ -0.23
TGFBR1-209ENST00000552516 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
TGFBR1-209ENST00000552516 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
TGFBR1-209ENST00000552516 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
TGFBR1-209ENST00000552516 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
TGFBR1-209ENST00000552516 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
TGFBR1-209ENST00000552516 DZIP1LQ8IYY4 767 aaKnown RBP13.58□□□□□ -0.23
TGFBR1-209ENST00000552516 BRD4O60885 1362 aaPredicted RBP13.58□□□□□ -0.23
TGFBR1-209ENST00000552516 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.24
TGFBR1-209ENST00000552516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.243e-9■■■□□ 18.3
TGFBR1-209ENST00000552516 SYCP2Q9BX26 1530 aa13.57□□□□□ -0.24
TGFBR1-209ENST00000552516 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
TGFBR1-209ENST00000552516 TULP1O00294 542 aaPredicted RBP13.57□□□□□ -0.24
TGFBR1-209ENST00000552516 MCM10Q7L590 875 aa13.57□□□□□ -0.24
TGFBR1-209ENST00000552516 NOS1P29475 1434 aa13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 HSCBQ8IWL3 235 aa13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 MSH5O43196 834 aa13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 FKBP5Q13451 457 aaPredicted RBP13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 DISP1Q96F81 1524 aa13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 FGD1P98174 961 aa13.56□□□□□ -0.24
TGFBR1-209ENST00000552516 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
TGFBR1-209ENST00000552516 FANCAO15360 1455 aa13.55□□□□□ -0.24
TGFBR1-209ENST00000552516 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
TGFBR1-209ENST00000552516 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
TGFBR1-209ENST00000552516 ANP32BQ92688 251 aaKnown RBP13.54□□□□□ -0.24
TGFBR1-209ENST00000552516 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
TGFBR1-209ENST00000552516 KIF14Q15058 1648 aa13.54□□□□□ -0.24
TGFBR1-209ENST00000552516 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms