RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	PDIA6	Q15084	440 aa		11	□□□□□ -0.65
CNOT2-238	ENST00000552422	CARMIL2	Q6F5E8	1435 aa		11	□□□□□ -0.65
CNOT2-238	ENST00000552422	SAMD9	Q5K651	1589 aa		10.99	□□□□□ -0.65
CNOT2-238	ENST00000552422	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.99	□□□□□ -0.65
CNOT2-238	ENST00000552422	GOLGA3	Q08378	1498 aa		10.99	□□□□□ -0.65
CNOT2-238	ENST00000552422	ADCY10	Q96PN6	1610 aa		10.98	□□□□□ -0.65
CNOT2-238	ENST00000552422	EPAS1	Q99814	870 aa		10.98	□□□□□ -0.65
CNOT2-238	ENST00000552422	STAC3	Q96MF2	364 aa		10.97	□□□□□ -0.65
CNOT2-238	ENST00000552422	VPS9D1	Q9Y2B5	631 aa		10.96	□□□□□ -0.65
CNOT2-238	ENST00000552422	TNIK	Q9UKE5	1360 aa		10.95	□□□□□ -0.66
CNOT2-238	ENST00000552422	NBR1	Q14596	966 aa		10.95	□□□□□ -0.66
CNOT2-238	ENST00000552422	HR	O43593	1189 aa		10.94	□□□□□ -0.66
CNOT2-238	ENST00000552422	RBM33	Q96EV2	1170 aa	Known RBP	10.94	□□□□□ -0.66
CNOT2-238	ENST00000552422	EFCAB5	A4FU69	1503 aa		10.94	□□□□□ -0.66
CNOT2-238	ENST00000552422	PPP1R3G	B7ZBB8	358 aa		10.93	□□□□□ -0.66
CNOT2-238	ENST00000552422	ZBED2	Q9BTP6	218 aa		10.93	□□□□□ -0.66
CNOT2-238	ENST00000552422	SLC4A5	Q9BY07	1137 aa		10.93	□□□□□ -0.66
CNOT2-238	ENST00000552422	PTPRG	P23470	1445 aa		10.92	□□□□□ -0.66
CNOT2-238	ENST00000552422	KIF13A	Q9H1H9	1805 aa		10.91	□□□□□ -0.66
CNOT2-238	ENST00000552422	ABCC2	Q92887	1545 aa		10.91	□□□□□ -0.66
CNOT2-238	ENST00000552422	GRXCR2	A6NFK2	248 aa		10.91	□□□□□ -0.66
CNOT2-238	ENST00000552422	HAP1	P54257	671 aa	Predicted RBP	10.91	□□□□□ -0.66
CNOT2-238	ENST00000552422	UHRF1BP1L	A0JNW5	1464 aa		10.9	□□□□□ -0.66
CNOT2-238	ENST00000552422	MAP3K7	O43318	606 aa		10.9	□□□□□ -0.66
CNOT2-238	ENST00000552422	COL9A1	P20849	921 aa		10.9	□□□□□ -0.66
CNOT2-238	ENST00000552422	C6orf132	Q5T0Z8	1188 aa		10.9	□□□□□ -0.66
CNOT2-238	ENST00000552422	KCNV2	Q8TDN2	545 aa		10.9	□□□□□ -0.66
CNOT2-238	ENST00000552422	ABCA8	O94911	1581 aa		10.9	□□□□□ -0.67
CNOT2-238	ENST00000552422	ARHGEF1	Q92888	912 aa	Known RBP	10.89	□□□□□ -0.67
CNOT2-238	ENST00000552422	MAPKBP1	O60336	1514 aa		10.89	□□□□□ -0.67
CNOT2-238	ENST00000552422	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.88	□□□□□ -0.67
CNOT2-238	ENST00000552422	EN1	Q05925	392 aa	Predicted RBP	10.88	□□□□□ -0.67
CNOT2-238	ENST00000552422	UACA	Q9BZF9	1416 aa		10.88	□□□□□ -0.67
CNOT2-238	ENST00000552422	PROX2	Q3B8N5	592 aa		10.87	□□□□□ -0.67
CNOT2-238	ENST00000552422	RAPGEF6	Q8TEU7	1601 aa		10.87	□□□□□ -0.67
CNOT2-238	ENST00000552422	PLB1	Q6P1J6	1458 aa		10.87	□□□□□ -0.67
CNOT2-238	ENST00000552422	UBTF	P17480	764 aa	Known RBP	10.86	□□□□□ -0.67
CNOT2-238	ENST00000552422	P3H3	Q8IVL6	736 aa		10.86	□□□□□ -0.67
CNOT2-238	ENST00000552422	KDM5B	Q9UGL1	1544 aa		10.85	□□□□□ -0.67
CNOT2-238	ENST00000552422	TSR1	Q2NL82	804 aa	Known RBP	10.85	□□□□□ -0.67
CNOT2-238	ENST00000552422	KCTD12	Q96CX2	325 aa	Known RBP	10.85	□□□□□ -0.67
CNOT2-238	ENST00000552422	NBPF3	Q9H094	633 aa		10.85	□□□□□ -0.67
CNOT2-238	ENST00000552422	GOLGA8CP	A6NN73	597 aa		10.84	□□□□□ -0.67
CNOT2-238	ENST00000552422	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.84	□□□□□ -0.67
CNOT2-238	ENST00000552422	MRPL50	Q8N5N7	158 aa	Known RBP	10.84	□□□□□ -0.67
CNOT2-238	ENST00000552422	ARHGAP35	Q9NRY4	1499 aa		10.84	□□□□□ -0.67
CNOT2-238	ENST00000552422	FHOD3	Q2V2M9	1422 aa		10.84	□□□□□ -0.67
CNOT2-238	ENST00000552422	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.84	□□□□□ -0.67
CNOT2-238	ENST00000552422	DIP2B	Q9P265	1576 aa		10.83	□□□□□ -0.68
CNOT2-238	ENST00000552422	RABGEF1	Q9UJ41	708 aa		10.82	□□□□□ -0.68
CNOT2-238	ENST00000552422	LRRIQ1	Q96JM4	1722 aa		10.81	□□□□□ -0.68
CNOT2-238	ENST00000552422	PRIM1	P49642	420 aa	Known RBP	10.81	□□□□□ -0.68
CNOT2-238	ENST00000552422	HCST	Q9UBK5	93 aa		10.81	□□□□□ -0.68
CNOT2-238	ENST00000552422	OSBP	P22059	807 aa		10.8	□□□□□ -0.68
CNOT2-238	ENST00000552422	KIAA1468	Q9P260	1216 aa		10.8	□□□□□ -0.68
CNOT2-238	ENST00000552422	TRIM6-TRIM34	B2RNG4	842 aa		10.79	□□□□□ -0.68
CNOT2-238	ENST00000552422	RANGAP1	P46060	587 aa	Predicted RBP	10.79	□□□□□ -0.68
CNOT2-238	ENST00000552422	NUP153	P49790	1475 aa	Known RBP	10.79	□□□□□ -0.68
CNOT2-238	ENST00000552422	ABCC10	Q5T3U5	1492 aa		10.79	□□□□□ -0.68
CNOT2-238	ENST00000552422	TSPOAP1	O95153	1857 aa		10.78	□□□□□ -0.68
CNOT2-238	ENST00000552422	ASXL2	Q76L83	1435 aa		10.78	□□□□□ -0.68
CNOT2-238	ENST00000552422	HECW1	Q76N89	1606 aa		10.78	□□□□□ -0.68
CNOT2-238	ENST00000552422	ONECUT3	O60422	494 aa	Predicted RBP	10.78	□□□□□ -0.68
CNOT2-238	ENST00000552422	WNT2B	Q93097	391 aa		10.78	□□□□□ -0.68
CNOT2-238	ENST00000552422	FMN1	Q68DA7	1419 aa		10.77	□□□□□ -0.68
CNOT2-238	ENST00000552422	MLLT3	P42568	568 aa	Predicted RBP	10.77	□□□□□ -0.69
CNOT2-238	ENST00000552422	PCF11	O94913	1555 aa	Known RBP	10.77	□□□□□ -0.69
CNOT2-238	ENST00000552422	GLI2	P10070	1586 aa		10.77	□□□□□ -0.69
CNOT2-238	ENST00000552422	CLIP1	P30622	1438 aa		10.76	□□□□□ -0.69
CNOT2-238	ENST00000552422	WDR7	Q9Y4E6	1490 aa		10.76	□□□□□ -0.69
CNOT2-238	ENST00000552422	CERK	Q8TCT0	537 aa		10.76	□□□□□ -0.69
CNOT2-238	ENST00000552422	CDHR5	Q9HBB8	845 aa		10.76	□□□□□ -0.69
CNOT2-238	ENST00000552422	MAP3K4	Q9Y6R4	1608 aa		10.76	□□□□□ -0.69
CNOT2-238	ENST00000552422	ATP10B	O94823	1461 aa		10.75	□□□□□ -0.69
CNOT2-238	ENST00000552422	PPRC1	Q5VV67	1664 aa	Known RBP	10.75	□□□□□ -0.69
CNOT2-238	ENST00000552422	CEP162	Q5TB80	1403 aa		10.75	□□□□□ -0.69
CNOT2-238	ENST00000552422	CFAP43	Q8NDM7	1665 aa		10.74	□□□□□ -0.69
CNOT2-238	ENST00000552422	PTPN5	P54829	565 aa		10.74	□□□□□ -0.69
CNOT2-238	ENST00000552422	LAPTM4B	Q86VI4	370 aa		10.74	□□□□□ -0.69
CNOT2-238	ENST00000552422	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.74	□□□□□ -0.69
CNOT2-238	ENST00000552422	EPRS	P07814	1512 aa	Known RBP	10.74	□□□□□ -0.69
CNOT2-238	ENST00000552422	THSD4	Q6ZMP0	1018 aa		10.73	□□□□□ -0.69
CNOT2-238	ENST00000552422	PACS2	Q86VP3	889 aa		10.73	□□□□□ -0.69
CNOT2-238	ENST00000552422	CDCA7L	Q96GN5	454 aa		10.73	□□□□□ -0.69
CNOT2-238	ENST00000552422	TSKS	Q9UJT2	592 aa		10.73	□□□□□ -0.69
CNOT2-238	ENST00000552422	PRSS12	P56730	875 aa		10.72	□□□□□ -0.69
CNOT2-238	ENST00000552422	ANKK1	Q8NFD2	765 aa		10.72	□□□□□ -0.69
CNOT2-238	ENST00000552422	KDM2A	Q9Y2K7	1162 aa		10.72	□□□□□ -0.69
CNOT2-238	ENST00000552422	SEMA3E	O15041	775 aa		10.71	□□□□□ -0.69
CNOT2-238	ENST00000552422	CDK13	Q14004	1512 aa	Known RBP	10.71	□□□□□ -0.69
CNOT2-238	ENST00000552422	ABCA9	Q8IUA7	1624 aa		10.71	□□□□□ -0.69
CNOT2-238	ENST00000552422	FYCO1	Q9BQS8	1478 aa		10.71	□□□□□ -0.69
CNOT2-238	ENST00000552422	CASKIN1	Q8WXD9	1431 aa		10.7	□□□□□ -0.7
CNOT2-238	ENST00000552422	LOC105371045	A0A1W2PR82	267 aa		10.69	□□□□□ -0.7
CNOT2-238	ENST00000552422	FAM98C	Q17RN3	349 aa	Known RBP	10.69	□□□□□ -0.7
CNOT2-238	ENST00000552422	ZFR	Q96KR1	1074 aa	Known RBP	10.69	□□□□□ -0.7
CNOT2-238	ENST00000552422	CCDC18	Q5T9S5	1454 aa		10.68	□□□□□ -0.7
CNOT2-238	ENST00000552422	FAM69C	Q0P6D2	419 aa		10.68	□□□□□ -0.7
CNOT2-238	ENST00000552422	VSIG10	Q8N0Z9	540 aa		10.68	□□□□□ -0.7
CNOT2-238	ENST00000552422	ARID3C	A6NKF2	412 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms