RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 PIP4K2BP78356 416 aa21.16■□□□□ 0.98
DDX54-210ENST00000552375 PPP1R15AO75807 674 aaPredicted RBP21.15■□□□□ 0.98
DDX54-210ENST00000552375 SLC26A8Q96RN1 970 aa21.15■□□□□ 0.98
DDX54-210ENST00000552375 NKTRP30414 1462 aaKnown RBP21.14■□□□□ 0.98
DDX54-210ENST00000552375 CHGAP10645 457 aaKnown RBP21.14■□□□□ 0.97
DDX54-210ENST00000552375 MYO5BQ9ULV0 1848 aa21.13■□□□□ 0.97
DDX54-210ENST00000552375 KCNA6P17658 529 aa21.13■□□□□ 0.97
DDX54-210ENST00000552375 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
DDX54-210ENST00000552375 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
DDX54-210ENST00000552375 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.12■□□□□ 0.97
DDX54-210ENST00000552375 DISP3Q9P2K9 1392 aa21.11■□□□□ 0.97
DDX54-210ENST00000552375 TRPM2O94759 1503 aa21.11■□□□□ 0.97
DDX54-210ENST00000552375 BCANQ96GW7 911 aa21.11■□□□□ 0.97
DDX54-210ENST00000552375 TMEM94Q12767 1356 aa21.1■□□□□ 0.97
DDX54-210ENST00000552375 HSPA1LP34931 641 aa21.1■□□□□ 0.97
DDX54-210ENST00000552375 DIP2AQ14689 1571 aa21.09■□□□□ 0.97
DDX54-210ENST00000552375 ADAMTS13Q76LX8 1427 aa21.08■□□□□ 0.97
DDX54-210ENST00000552375 XIRP1Q702N8 1843 aaKnown RBP21.06■□□□□ 0.96
DDX54-210ENST00000552375 CLTCL1P53675 1640 aa21.05■□□□□ 0.96
DDX54-210ENST00000552375 NUTM2DQ5VT03 806 aaPredicted RBP21.05■□□□□ 0.96
DDX54-210ENST00000552375 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
DDX54-210ENST00000552375 TBX22Q9Y458 520 aa21.05■□□□□ 0.96
DDX54-210ENST00000552375 PIK3R4Q99570 1358 aa21.03■□□□□ 0.96
DDX54-210ENST00000552375 PROSER2Q86WR7 435 aaPredicted RBP21.03■□□□□ 0.96
DDX54-210ENST00000552375 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
DDX54-210ENST00000552375 SETBP1Q9Y6X0 1596 aa21.01■□□□□ 0.95
DDX54-210ENST00000552375 RBM33Q96EV2 1170 aaKnown RBP20.99■□□□□ 0.95
DDX54-210ENST00000552375 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
DDX54-210ENST00000552375 NEXMIFQ5QGS0 1516 aa20.99■□□□□ 0.95
DDX54-210ENST00000552375 MSH6P52701 1360 aa20.98■□□□□ 0.95
DDX54-210ENST00000552375 ZNF326Q5BKZ1 582 aaKnown RBP20.98■□□□□ 0.95
DDX54-210ENST00000552375 CHD2O14647 1828 aaKnown RBP20.98■□□□□ 0.95
DDX54-210ENST00000552375 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
DDX54-210ENST00000552375 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
DDX54-210ENST00000552375 NCOA3Q9Y6Q9 1424 aa20.96■□□□□ 0.95
DDX54-210ENST00000552375 MED1Q15648 1581 aaPredicted RBP20.96■□□□□ 0.95
DDX54-210ENST00000552375 PTPRUQ92729 1446 aa20.94■□□□□ 0.94
DDX54-210ENST00000552375 ILDR2Q71H61 639 aa20.91■□□□□ 0.94
DDX54-210ENST00000552375 XRN1Q8IZH2 1706 aaKnown RBP20.91■□□□□ 0.94
DDX54-210ENST00000552375 KIF1BO60333 1816 aa20.9■□□□□ 0.94
DDX54-210ENST00000552375 ROBO1Q9Y6N7 1651 aa20.89■□□□□ 0.94
DDX54-210ENST00000552375 AMOTL2Q9Y2J4 779 aa20.89■□□□□ 0.93
DDX54-210ENST00000552375 METP08581 1390 aa20.88■□□□□ 0.93
DDX54-210ENST00000552375 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
DDX54-210ENST00000552375 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
DDX54-210ENST00000552375 FOXD1Q16676 465 aa20.87■□□□□ 0.93
DDX54-210ENST00000552375 RPGRIP1LQ68CZ1 1315 aa20.86■□□□□ 0.93
DDX54-210ENST00000552375 C14orf37Q86TY3 774 aa20.86■□□□□ 0.93
DDX54-210ENST00000552375 ACIN1Q9UKV3 1341 aaKnown RBP20.85■□□□□ 0.93
DDX54-210ENST00000552375 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
DDX54-210ENST00000552375 SLAIN2Q9P270 581 aa20.85■□□□□ 0.93
DDX54-210ENST00000552375 DCCP43146 1447 aa20.85■□□□□ 0.93
DDX54-210ENST00000552375 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
DDX54-210ENST00000552375 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
DDX54-210ENST00000552375 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
DDX54-210ENST00000552375 CADPS2Q86UW7 1296 aa20.83■□□□□ 0.93
DDX54-210ENST00000552375 SPATA31E1Q6ZUB1 1445 aa20.82■□□□□ 0.92
DDX54-210ENST00000552375 PTCH1Q13635 1447 aa20.81■□□□□ 0.92
DDX54-210ENST00000552375 PRAG1Q86YV5 1406 aa20.81■□□□□ 0.92
DDX54-210ENST00000552375 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
DDX54-210ENST00000552375 ATF3P18847 181 aa20.8■□□□□ 0.92
DDX54-210ENST00000552375 SETD1AO15047 1707 aaKnown RBP20.79■□□□□ 0.92
DDX54-210ENST00000552375 PPLO60437 1756 aa20.79■□□□□ 0.92
DDX54-210ENST00000552375 ADGRL3Q9HAR2 1447 aa20.78■□□□□ 0.92
DDX54-210ENST00000552375 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
DDX54-210ENST00000552375 SOCS7O14512 581 aa20.76■□□□□ 0.91
DDX54-210ENST00000552375 AHDC1Q5TGY3 1603 aaPredicted RBP20.75■□□□□ 0.91
DDX54-210ENST00000552375 ANKRD30BQ9BXX2 1392 aa20.75■□□□□ 0.91
DDX54-210ENST00000552375 MST1RQ04912 1400 aa20.74■□□□□ 0.91
DDX54-210ENST00000552375 COL16A1Q07092 1604 aaPredicted RBP20.74■□□□□ 0.91
DDX54-210ENST00000552375 ROBO2Q9HCK4 1378 aa20.73■□□□□ 0.91
DDX54-210ENST00000552375 PHLPP1O60346 1717 aa20.73■□□□□ 0.91
DDX54-210ENST00000552375 JCADQ9P266 1359 aa20.72■□□□□ 0.91
DDX54-210ENST00000552375 ADGRF5Q8IZF2 1346 aa20.72■□□□□ 0.91
DDX54-210ENST00000552375 NALCNQ8IZF0 1738 aa20.71■□□□□ 0.91
DDX54-210ENST00000552375 RGL3Q3MIN7 710 aa20.71■□□□□ 0.91
DDX54-210ENST00000552375 BRINP3Q76B58 766 aa20.71■□□□□ 0.91
DDX54-210ENST00000552375 ASXL1Q8IXJ9 1541 aa20.71■□□□□ 0.91
DDX54-210ENST00000552375 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
DDX54-210ENST00000552375 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
DDX54-210ENST00000552375 TECPR2O15040 1411 aa20.67■□□□□ 0.9
DDX54-210ENST00000552375 MYOM2P54296 1465 aa20.66■□□□□ 0.9
DDX54-210ENST00000552375 NRXN1Q9ULB1 1477 aa20.65■□□□□ 0.9
DDX54-210ENST00000552375 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
DDX54-210ENST00000552375 C1orf167Q5SNV9 1468 aa20.63■□□□□ 0.89
DDX54-210ENST00000552375 HRCP23327 699 aa20.63■□□□□ 0.89
DDX54-210ENST00000552375 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
DDX54-210ENST00000552375 RGS17Q9UGC6 210 aaPredicted RBP20.62■□□□□ 0.89
DDX54-210ENST00000552375 CDC42BPGQ6DT37 1551 aa20.62■□□□□ 0.89
DDX54-210ENST00000552375 NHSL1Q5SYE7 1610 aa20.61■□□□□ 0.89
DDX54-210ENST00000552375 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
DDX54-210ENST00000552375 LRP6O75581 1613 aa20.6■□□□□ 0.89
DDX54-210ENST00000552375 ABCC11Q96J66 1382 aa20.6■□□□□ 0.89
DDX54-210ENST00000552375 KNDC1Q76NI1 1749 aa20.59■□□□□ 0.89
DDX54-210ENST00000552375 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.88
DDX54-210ENST00000552375 LAMC1P11047 1609 aa20.57■□□□□ 0.88
DDX54-210ENST00000552375 TMEM132EQ6IEE7 984 aa20.56■□□□□ 0.88
DDX54-210ENST00000552375 STK26Q9P289 416 aa20.56■□□□□ 0.88
DDX54-210ENST00000552375 C14orf93Q9H972 538 aaKnown RBP20.55■□□□□ 0.88
DDX54-210ENST00000552375 PLEKHH1Q9ULM0 1364 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms