RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.2□□□□□ -0.14
CHPT1-209ENST00000552329 MDM2Q00987 491 aaPredicted RBP14.18□□□□□ -0.14
CHPT1-209ENST00000552329 THSD4Q6ZMP0 1018 aa14.18□□□□□ -0.14
CHPT1-209ENST00000552329 AK7Q96M32 723 aa14.18□□□□□ -0.14
CHPT1-209ENST00000552329 TMEM134Q9H6X4 195 aa14.18□□□□□ -0.14
CHPT1-209ENST00000552329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.17□□□□□ -0.14
CHPT1-209ENST00000552329 SOWAHBA6NEL2 793 aa14.16□□□□□ -0.14
CHPT1-209ENST00000552329 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
CHPT1-209ENST00000552329 TRIM66O15016 1216 aa14.14□□□□□ -0.15
CHPT1-209ENST00000552329 TTLL12Q14166 644 aaPredicted RBP14.12□□□□□ -0.15
CHPT1-209ENST00000552329 WBP1LQ9NX94 342 aa14.12□□□□□ -0.15
CHPT1-209ENST00000552329 DDX11L8A8MPP1 907 aa14.1□□□□□ -0.15
CHPT1-209ENST00000552329 REPIN1Q9BWE0 567 aaKnown RBP14.1□□□□□ -0.15
CHPT1-209ENST00000552329 PPP4CP60510 307 aa14.09□□□□□ -0.15
CHPT1-209ENST00000552329 SLF2Q8IX21 1173 aa14.09□□□□□ -0.15
CHPT1-209ENST00000552329 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.16
CHPT1-209ENST00000552329 TSR3Q9UJK0 312 aaKnown RBP14.08□□□□□ -0.16
CHPT1-209ENST00000552329 RDH13Q8NBN7 331 aa14.07□□□□□ -0.16
CHPT1-209ENST00000552329 SLC4A3P48751 1232 aa14.06□□□□□ -0.16
CHPT1-209ENST00000552329 PDE4DQ08499 809 aa14.06□□□□□ -0.16
CHPT1-209ENST00000552329 SLC10A3P09131 477 aa14.05□□□□□ -0.16
CHPT1-209ENST00000552329 GPCPD1Q9NPB8 672 aa14.05□□□□□ -0.16
CHPT1-209ENST00000552329 HCSTQ9UBK5 93 aa14.05□□□□□ -0.16
CHPT1-209ENST00000552329 CLCN1P35523 988 aa14.04□□□□□ -0.16
CHPT1-209ENST00000552329 AMHR2Q16671 573 aa14.03□□□□□ -0.16
CHPT1-209ENST00000552329 PARP9Q8IXQ6 854 aa14.03□□□□□ -0.16
CHPT1-209ENST00000552329 GIGYF2Q6Y7W6 1299 aaKnown RBP14.02□□□□□ -0.17
CHPT1-209ENST00000552329 CFHP08603 1231 aa14□□□□□ -0.17
CHPT1-209ENST00000552329 APLP1P51693 650 aa14□□□□□ -0.17
CHPT1-209ENST00000552329 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
CHPT1-209ENST00000552329 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
CHPT1-209ENST00000552329 SULF1Q8IWU6 871 aa13.98□□□□□ -0.17
CHPT1-209ENST00000552329 TMUB1Q9BVT8 246 aa13.98□□□□□ -0.17
CHPT1-209ENST00000552329 SSTR3P32745 418 aaPredicted RBP13.97□□□□□ -0.17
CHPT1-209ENST00000552329 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
CHPT1-209ENST00000552329 MS4A1P11836 297 aa13.93□□□□□ -0.18
CHPT1-209ENST00000552329 NEUROD2Q15784 382 aa13.93□□□□□ -0.18
CHPT1-209ENST00000552329 CD46P15529 392 aa13.92□□□□□ -0.18
CHPT1-209ENST00000552329 KMT5BQ4FZB7 885 aa13.91□□□□□ -0.18
CHPT1-209ENST00000552329 GCGRP47871 477 aa13.9□□□□□ -0.18
CHPT1-209ENST00000552329 COPS2P61201 443 aa13.9□□□□□ -0.18
CHPT1-209ENST00000552329 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
CHPT1-209ENST00000552329 PUS10Q3MIT2 529 aaKnown RBP13.89□□□□□ -0.19
CHPT1-209ENST00000552329 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
CHPT1-209ENST00000552329 FUT2Q10981 343 aa13.88□□□□□ -0.19
CHPT1-209ENST00000552329 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
CHPT1-209ENST00000552329 NYAP1Q6ZVC0 841 aa13.87□□□□□ -0.19
CHPT1-209ENST00000552329 PCDHB3Q9Y5E6 796 aa13.87□□□□□ -0.19
CHPT1-209ENST00000552329 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
CHPT1-209ENST00000552329 ACTN4O43707 911 aaKnown RBP13.85□□□□□ -0.19
CHPT1-209ENST00000552329 BLOC1S3Q6QNY0 202 aa13.85□□□□□ -0.19
CHPT1-209ENST00000552329 MTRQ99707 1265 aa13.84□□□□□ -0.19
CHPT1-209ENST00000552329 PRR14Q9BWN1 585 aa13.84□□□□□ -0.19
CHPT1-209ENST00000552329 HLA-CQ95604 372 aa13.83□□□□□ -0.2
CHPT1-209ENST00000552329 KDM4AO75164 1064 aa13.82□□□□□ -0.2
CHPT1-209ENST00000552329 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
CHPT1-209ENST00000552329 ZNF516Q92618 1163 aa13.82□□□□□ -0.2
CHPT1-209ENST00000552329 FAM117AQ9C073 453 aa13.81□□□□□ -0.2
CHPT1-209ENST00000552329 TJAP1Q5JTD0 557 aa13.8□□□□□ -0.2
CHPT1-209ENST00000552329 GUCA2AQ02747 115 aa13.79□□□□□ -0.2
CHPT1-209ENST00000552329 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
CHPT1-209ENST00000552329 SPIRE2Q8WWL2 714 aa13.78□□□□□ -0.2
CHPT1-209ENST00000552329 PLA2G2EQ9NZK7 142 aa13.78□□□□□ -0.2
CHPT1-209ENST00000552329 IL27Q8NEV9 243 aa13.76□□□□□ -0.21
CHPT1-209ENST00000552329 TBC1D2Q9BYX2 928 aa13.76□□□□□ -0.21
CHPT1-209ENST00000552329 TLL1O43897 1013 aa13.75□□□□□ -0.21
CHPT1-209ENST00000552329 NDUFV2P19404 249 aa13.75□□□□□ -0.21
CHPT1-209ENST00000552329 NKX2-3Q8TAU0 364 aa13.75□□□□□ -0.21
CHPT1-209ENST00000552329 IL21Q9HBE4 155 aa13.75□□□□□ -0.21
CHPT1-209ENST00000552329 HOXA2O43364 376 aa13.74□□□□□ -0.21
CHPT1-209ENST00000552329 KCNC4Q03721 635 aa13.74□□□□□ -0.21
CHPT1-209ENST00000552329 MORN1Q5T089 497 aa13.74□□□□□ -0.21
CHPT1-209ENST00000552329 SLC27A5Q9Y2P5 690 aa13.74□□□□□ -0.21
CHPT1-209ENST00000552329 MOXD2PA6NHM9 499 aa13.73□□□□□ -0.21
CHPT1-209ENST00000552329 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
CHPT1-209ENST00000552329 ZPR1O75312 459 aa13.72□□□□□ -0.21
CHPT1-209ENST00000552329 NR1I2O75469 434 aa13.71□□□□□ -0.21
CHPT1-209ENST00000552329 ITGBL1O95965 494 aaPredicted RBP13.71□□□□□ -0.21
CHPT1-209ENST00000552329 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.21
CHPT1-209ENST00000552329 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
CHPT1-209ENST00000552329 USP46P62068 366 aa13.7□□□□□ -0.22
CHPT1-209ENST00000552329 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
CHPT1-209ENST00000552329 POLR3EQ9NVU0 708 aa13.69□□□□□ -0.22
CHPT1-209ENST00000552329 ATP1B4Q9UN42 357 aaPredicted RBP13.69□□□□□ -0.22
CHPT1-209ENST00000552329 RNF19BQ6ZMZ0 732 aa13.68□□□□□ -0.22
CHPT1-209ENST00000552329 FDX1P10109 184 aa13.67□□□□□ -0.22
CHPT1-209ENST00000552329 MYSM1Q5VVJ2 828 aa13.67□□□□□ -0.22
CHPT1-209ENST00000552329 SYMPKQ92797 1274 aaKnown RBP13.67□□□□□ -0.22
CHPT1-209ENST00000552329 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
CHPT1-209ENST00000552329 PCDHGC3Q9UN70 934 aa13.66□□□□□ -0.22
CHPT1-209ENST00000552329 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
CHPT1-209ENST00000552329 SPSB2Q99619 263 aa13.63□□□□□ -0.23
CHPT1-209ENST00000552329 LIMD1Q9UGP4 676 aa13.63□□□□□ -0.23
CHPT1-209ENST00000552329 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
CHPT1-209ENST00000552329 C6orf229H3BNL8 230 aa13.62□□□□□ -0.23
CHPT1-209ENST00000552329 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
CHPT1-209ENST00000552329 FMNL1O95466 1100 aaPredicted RBP13.61□□□□□ -0.23
CHPT1-209ENST00000552329 DIXDC1Q155Q3 683 aa13.61□□□□□ -0.23
CHPT1-209ENST00000552329 THAP11Q96EK4 314 aa13.6□□□□□ -0.23
CHPT1-209ENST00000552329 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms