RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 TXNDC2Q86VQ3 553 aa13.75□□□□□ -0.21
CDK4-211ENST00000552254 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
CDK4-211ENST00000552254 PHLPP1O60346 1717 aa13.75□□□□□ -0.21
CDK4-211ENST00000552254 E9PCH4 1651 aa13.75□□□□□ -0.21
CDK4-211ENST00000552254 SLIT1O75093 1534 aa13.74□□□□□ -0.21
CDK4-211ENST00000552254 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
CDK4-211ENST00000552254 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
CDK4-211ENST00000552254 NOS1P29475 1434 aa13.73□□□□□ -0.21
CDK4-211ENST00000552254 MEX3CQ5U5Q3 659 aaKnown RBP13.73□□□□□ -0.21
CDK4-211ENST00000552254 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
CDK4-211ENST00000552254 RPRD2Q5VT52 1461 aaKnown RBP13.72□□□□□ -0.21
CDK4-211ENST00000552254 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.21
CDK4-211ENST00000552254 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
CDK4-211ENST00000552254 KDM5AP29375 1690 aaKnown RBP13.71□□□□□ -0.21
CDK4-211ENST00000552254 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.22
CDK4-211ENST00000552254 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
CDK4-211ENST00000552254 ADGRB3O60242 1522 aa13.69□□□□□ -0.22
CDK4-211ENST00000552254 JCADQ9P266 1359 aa13.69□□□□□ -0.22
CDK4-211ENST00000552254 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
CDK4-211ENST00000552254 SLC26A8Q96RN1 970 aa13.67□□□□□ -0.22
CDK4-211ENST00000552254 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
CDK4-211ENST00000552254 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
CDK4-211ENST00000552254 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
CDK4-211ENST00000552254 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
CDK4-211ENST00000552254 MSH6P52701 1360 aa13.66□□□□□ -0.22
CDK4-211ENST00000552254 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
CDK4-211ENST00000552254 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
CDK4-211ENST00000552254 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
CDK4-211ENST00000552254 BCANQ96GW7 911 aa13.64□□□□□ -0.23
CDK4-211ENST00000552254 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
CDK4-211ENST00000552254 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
CDK4-211ENST00000552254 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
CDK4-211ENST00000552254 ZFYVE9O95405 1425 aa13.62□□□□□ -0.23
CDK4-211ENST00000552254 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
CDK4-211ENST00000552254 FOXD1Q16676 465 aa13.61□□□□□ -0.23
CDK4-211ENST00000552254 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
CDK4-211ENST00000552254 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
CDK4-211ENST00000552254 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
CDK4-211ENST00000552254 KCNA6P17658 529 aa13.6□□□□□ -0.23
CDK4-211ENST00000552254 HRCP23327 699 aa13.6□□□□□ -0.23
CDK4-211ENST00000552254 RXRBP28702 533 aa13.6□□□□□ -0.23
CDK4-211ENST00000552254 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
CDK4-211ENST00000552254 LRP6O75581 1613 aa13.6□□□□□ -0.23
CDK4-211ENST00000552254 SPATA31A6Q5VVP1 1343 aa13.6□□□□□ -0.23
CDK4-211ENST00000552254 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
CDK4-211ENST00000552254 KIF1BO60333 1816 aa13.59□□□□□ -0.23
CDK4-211ENST00000552254 TRPM2O94759 1503 aa13.59□□□□□ -0.23
CDK4-211ENST00000552254 CLTCL1P53675 1640 aa13.58□□□□□ -0.24
CDK4-211ENST00000552254 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
CDK4-211ENST00000552254 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
CDK4-211ENST00000552254 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
CDK4-211ENST00000552254 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
CDK4-211ENST00000552254 SHPRHQ149N8 1683 aa13.58□□□□□ -0.24
CDK4-211ENST00000552254 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
CDK4-211ENST00000552254 CHD2O14647 1828 aaKnown RBP13.57□□□□□ -0.24
CDK4-211ENST00000552254 PLEKHG1Q9ULL1 1385 aa13.57□□□□□ -0.24
CDK4-211ENST00000552254 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
CDK4-211ENST00000552254 LRP5O75197 1615 aa13.56□□□□□ -0.24
CDK4-211ENST00000552254 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
CDK4-211ENST00000552254 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
CDK4-211ENST00000552254 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
CDK4-211ENST00000552254 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
CDK4-211ENST00000552254 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDK4-211ENST00000552254 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
CDK4-211ENST00000552254 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
CDK4-211ENST00000552254 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
CDK4-211ENST00000552254 AHDC1Q5TGY3 1603 aaPredicted RBP13.5□□□□□ -0.25
CDK4-211ENST00000552254 AFF2P51816 1311 aa13.5□□□□□ -0.25
CDK4-211ENST00000552254 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
CDK4-211ENST00000552254 EP400Q96L91 3159 aa13.49□□□□□ -0.25
CDK4-211ENST00000552254 CCDC144AA2RUR9 1427 aa13.48□□□□□ -0.25
CDK4-211ENST00000552254 RGS12O14924 1447 aa13.48□□□□□ -0.25
CDK4-211ENST00000552254 ATF3P18847 181 aa13.48□□□□□ -0.25
CDK4-211ENST00000552254 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
CDK4-211ENST00000552254 DIP2AQ14689 1571 aa13.47□□□□□ -0.25
CDK4-211ENST00000552254 PPLO60437 1756 aa13.47□□□□□ -0.25
CDK4-211ENST00000552254 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
CDK4-211ENST00000552254 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
CDK4-211ENST00000552254 NEXMIFQ5QGS0 1516 aa13.46□□□□□ -0.25
CDK4-211ENST00000552254 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
CDK4-211ENST00000552254 AMOTL2Q9Y2J4 779 aa13.46□□□□□ -0.25
CDK4-211ENST00000552254 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
CDK4-211ENST00000552254 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
CDK4-211ENST00000552254 C8orf37Q96NL8 207 aa13.45□□□□□ -0.26
CDK4-211ENST00000552254 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
CDK4-211ENST00000552254 SPATA31E1Q6ZUB1 1445 aa13.44□□□□□ -0.26
CDK4-211ENST00000552254 METP08581 1390 aa13.44□□□□□ -0.26
CDK4-211ENST00000552254 XRN1Q8IZH2 1706 aaKnown RBP13.43□□□□□ -0.26
CDK4-211ENST00000552254 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
CDK4-211ENST00000552254 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
CDK4-211ENST00000552254 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
CDK4-211ENST00000552254 RPGRIP1LQ68CZ1 1315 aa13.41□□□□□ -0.26
CDK4-211ENST00000552254 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
CDK4-211ENST00000552254 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
CDK4-211ENST00000552254 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
CDK4-211ENST00000552254 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
CDK4-211ENST00000552254 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
CDK4-211ENST00000552254 BRINP3Q76B58 766 aa13.38□□□□□ -0.27
CDK4-211ENST00000552254 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
CDK4-211ENST00000552254 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms