RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	NBPF4	Q96M43	638 aa		4.94	□□□□□ -1.62
CNOT2-231	ENST00000551483	TSPAN18	Q96SJ8	248 aa		4.94	□□□□□ -1.62
CNOT2-231	ENST00000551483	FAM117A	Q9C073	453 aa		4.94	□□□□□ -1.62
CNOT2-231	ENST00000551483	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CNOT2-231	ENST00000551483	ZRSR2	Q15696	482 aa	Known RBP	4.94	□□□□□ -1.62
CNOT2-231	ENST00000551483	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.94	□□□□□ -1.62
CNOT2-231	ENST00000551483	BANK1	Q8NDB2	785 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	KDM4C	Q9H3R0	1056 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	ANP32A	P39687	249 aa	Known RBP	4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	SDR16C5	Q8N3Y7	309 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	CARNS1	A5YM72	827 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	KCNV2	Q8TDN2	545 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	SREK1	Q8WXA9	508 aa	Known RBP	4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	AMOTL2	Q9Y2J4	779 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	UBA5	Q9GZZ9	404 aa		4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.93	□□□□□ -1.62
CNOT2-231	ENST00000551483	MSL3	Q8N5Y2	521 aa	Known RBP	4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	MRRF	Q96E11	262 aa	Known RBP	4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	ISY1	Q9ULR0	285 aa	Known RBP	4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	NGEF	Q8N5V2	710 aa		4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	PMM1	Q92871	262 aa		4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	FLII	Q13045	1269 aa		4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	LIG1	P18858	919 aa		4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	KAT6B	Q8WYB5	2073 aa		4.92	□□□□□ -1.62
CNOT2-231	ENST00000551483	MAP2K1	Q02750	393 aa	Predicted RBP	4.91	□□□□□ -1.62
CNOT2-231	ENST00000551483	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
CNOT2-231	ENST00000551483	CSPP1	Q1MSJ5	1256 aa		4.91	□□□□□ -1.62
CNOT2-231	ENST00000551483	SERPINA10	Q9UK55	444 aa		4.91	□□□□□ -1.62
CNOT2-231	ENST00000551483	TSR1	Q2NL82	804 aa	Known RBP	4.91	□□□□□ -1.62
CNOT2-231	ENST00000551483	NUB1	Q9Y5A7	615 aa		4.91	□□□□□ -1.62
CNOT2-231	ENST00000551483	DDX46	Q7L014	1031 aa	Known RBP	4.9	□□□□□ -1.62
CNOT2-231	ENST00000551483	IVNS1ABP	Q9Y6Y0	642 aa		4.9	□□□□□ -1.62
CNOT2-231	ENST00000551483	CSB-PGBD3	P0DP91	1061 aa		4.9	□□□□□ -1.63
CNOT2-231	ENST00000551483	ARHGEF1	Q92888	912 aa	Known RBP	4.9	□□□□□ -1.63
CNOT2-231	ENST00000551483	PAIP2	Q9BPZ3	127 aa	Known RBP	4.9	□□□□□ -1.63
CNOT2-231	ENST00000551483	PARN	O95453	639 aa	Known RBP	4.9	□□□□□ -1.63
CNOT2-231	ENST00000551483	TPX2	Q9ULW0	747 aa	Known RBP	4.9	□□□□□ -1.63
CNOT2-231	ENST00000551483	PDE6B	P35913	854 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	MCCD1	P59942	119 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	SETDB1	Q15047	1291 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	RPAIN	Q86UA6	219 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	RPGRIP1L	Q68CZ1	1315 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	PES1	O00541	588 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	CT47B1	P0C2W7	299 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	NAP1L1	P55209	391 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	PDILT	Q8N807	584 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	CCDC85A	Q96PX6	553 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	HSCB	Q8IWL3	235 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	FAM43A	Q8N2R8	423 aa		4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	MYCBP	Q99417	103 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-231	ENST00000551483	MPHOSPH10	O00566	681 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	IPO8	O15397	1037 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	ABCB7	O75027	752 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	hCG_2014768	A0A024R1R8	64 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	ARHGEF10L	Q9HCE6	1279 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	G3BP2	Q9UN86	482 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	ERICH4	A6NGS2	130 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	TERF1	P54274	439 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	PPP4R3B	Q5MIZ7	849 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	NBPF10	Q6P3W6	841 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	SPOCK2	Q92563	424 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	CACNB1	Q02641	598 aa	Predicted RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	KRI1	Q8N9T8	703 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	GPATCH3	Q96I76	525 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	PDCL3	Q9H2J4	239 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	STK26	Q9P289	416 aa		4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.88	□□□□□ -1.63
CNOT2-231	ENST00000551483	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	C11orf95	C9JLR9	678 aa	Predicted RBP	4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	APLP1	P51693	650 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	HMGN5	P82970	282 aa	Known RBP	4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	SMC5	Q8IY18	1101 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	RBM28	Q9NW13	759 aa	Known RBP	4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	COMMD10	Q9Y6G5	202 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	CLEC4G	Q6UXB4	293 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	IGSF5	Q9NSI5	407 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	FBXO9	Q9UK97	447 aa	Predicted RBP	4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	CCDC194	A0A1B0GVG4	234 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	CCDC189	A1A4V9	331 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	U2SURP	O15042	1029 aa	Known RBP	4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	CCDC184	Q52MB2	194 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	TTC30B	Q8N4P2	665 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	FANCI	Q9NVI1	1328 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	TCF3	P15923	654 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	NEXN	Q0ZGT2	675 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	MTA1	Q13330	715 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	C11orf96	Q7Z7L8	435 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	CCDC146	Q8IYE0	955 aa		4.87	□□□□□ -1.63
CNOT2-231	ENST00000551483	PUS10	Q3MIT2	529 aa	Known RBP	4.86	□□□□□ -1.63
CNOT2-231	ENST00000551483	IGBP1	P78318	339 aa		4.86	□□□□□ -1.63
CNOT2-231	ENST00000551483	SATB1	Q01826	763 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms